| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is mtaA [H]
Identifier: 21226278
GI number: 21226278
Start: 240526
End: 241545
Strand: Reverse
Name: mtaA [H]
Synonym: MM_0176
Alternate gene names: 21226278
Gene position: 241545-240526 (Counterclockwise)
Preceding gene: 21226282
Following gene: 21226274
Centisome position: 5.9
GC content: 48.33
Gene sequence:
>1020_bases ATGGGTGATATGACACTTAAGGAGAGACTTTTAAACGCATTGGAAGGAAAGCAGGTTGACAAAGTGCCTGTTTGTTCCGT GACTCAGACCGGGATTGTAGAATTGATGGATCAGGTGGGAGCACCCTGGCCAGAAGCTCACTCAGAACCTGAACTGATGG CAAAGCTGGCGATTGCAAATTATGAGGTCAGCGGGCTCGAAGCTGTGAGGGTTCCATACTGCCTGACAGTGCTTGCAGAA GCAATGGGATGTGAGGTCAATATGGGGACAAAAAACAGGCAGCCTTCTGTCACAGCTCACCCTTACCCCAAAGATCTCGA AGGTATGGAAATGCCTGAGAACCTGATTGATAAGGGCAGGATCCAGGCTGTCCTGGGCTCTATTAAAATCATCAGAGAAA AGGTAGGACCTGATGTGCCTATTATCGGCGGTATGGAAGGTCCGGTTACCCTTGCCTCCGACCTCTCAAGTGTAAAGACT TTTATGAAATGGTCTCTGAAAAAACCCGATCTTTTTGAGCAGGTACTTGATTTTGCTACCGAAGCCACAATAGCCTACGC AAACTCTATGGCTCTTGCAGGAGCAGACGTTGTTGCCATTGCGGACCCTGTTGCATCTCCTGACCTGATGAGTCCTGACT CCTTTAAAAATATACTTCAATCAAGACTCCAGAGGTTTTCCTCAAATGTGAACTCGGTCACAGTCCTGCACGTCTGCGGC AATGTAAATCCTATCCTTGACTATATGGCAGACTGTGGTTTCGAAGGTCTGAGTGTTGAAGAAAAAATAGGGAGCGTAAA GAAAGCCAAAGAAATACTCGGGGACAGAACCAGGCTCGTAGGAAACATTTCAAGCCCGTTCACTTTGCTTCCGGGCCCGG TTGACAAAATAAAAACCGAAGCCAGGCAGGCTCTTGATGACGGAGTTGACGTGCTGGCACCGGGATGTGGAATTGCGCCC ATGACCCCTGTTTCTCACATTAAAGCTATGGTAGAAGCCAGGGACGAGTATTACGCCTGA
Upstream 100 bases:
>100_bases ACGGTTAAAAACTGGACCGGAAAATTTCTTAAATATATTTCTTGACCGTAGCTGGACAGAGGCAGAATAAATCTCGAATC ATTTCAACGGGGAGATTACC
Downstream 100 bases:
>100_bases TTAATTGATATATATCTCCACTTAATTTTTAATTTCATTTTTTAGTCGAATGTGTTTTTAAAAATTTTTCTTTTTGTATC TTTTTTATTTTTATTATTTC
Product: methylcobalamin:coenzyme M methyltransferase
Products: NA
Alternate protein names: MT2-A; Methylcobamide:CoM methyltransferase II isozyme A [H]
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MGDMTLKERLLNALEGKQVDKVPVCSVTQTGIVELMDQVGAPWPEAHSEPELMAKLAIANYEVSGLEAVRVPYCLTVLAE AMGCEVNMGTKNRQPSVTAHPYPKDLEGMEMPENLIDKGRIQAVLGSIKIIREKVGPDVPIIGGMEGPVTLASDLSSVKT FMKWSLKKPDLFEQVLDFATEATIAYANSMALAGADVVAIADPVASPDLMSPDSFKNILQSRLQRFSSNVNSVTVLHVCG NVNPILDYMADCGFEGLSVEEKIGSVKKAKEILGDRTRLVGNISSPFTLLPGPVDKIKTEARQALDDGVDVLAPGCGIAP MTPVSHIKAMVEARDEYYA
Sequences:
>Translated_339_residues MGDMTLKERLLNALEGKQVDKVPVCSVTQTGIVELMDQVGAPWPEAHSEPELMAKLAIANYEVSGLEAVRVPYCLTVLAE AMGCEVNMGTKNRQPSVTAHPYPKDLEGMEMPENLIDKGRIQAVLGSIKIIREKVGPDVPIIGGMEGPVTLASDLSSVKT FMKWSLKKPDLFEQVLDFATEATIAYANSMALAGADVVAIADPVASPDLMSPDSFKNILQSRLQRFSSNVNSVTVLHVCG NVNPILDYMADCGFEGLSVEEKIGSVKKAKEILGDRTRLVGNISSPFTLLPGPVDKIKTEARQALDDGVDVLAPGCGIAP MTPVSHIKAMVEARDEYYA >Mature_338_residues GDMTLKERLLNALEGKQVDKVPVCSVTQTGIVELMDQVGAPWPEAHSEPELMAKLAIANYEVSGLEAVRVPYCLTVLAEA MGCEVNMGTKNRQPSVTAHPYPKDLEGMEMPENLIDKGRIQAVLGSIKIIREKVGPDVPIIGGMEGPVTLASDLSSVKTF MKWSLKKPDLFEQVLDFATEATIAYANSMALAGADVVAIADPVASPDLMSPDSFKNILQSRLQRFSSNVNSVTVLHVCGN VNPILDYMADCGFEGLSVEEKIGSVKKAKEILGDRTRLVGNISSPFTLLPGPVDKIKTEARQALDDGVDVLAPGCGIAPM TPVSHIKAMVEARDEYYA
Specific function: Catalyzes the transfer of the methyl group from the methylated corrinoid cofactor of mtmC, mtbC and mttC to coenzyme M [H]
COG id: COG0407
COG function: function code H; Uroporphyrinogen-III decarboxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uroporphyrinogen decarboxylase family. MtbA/mtaA subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006360 - InterPro: IPR000257 [H]
Pfam domain/function: PF01208 URO-D [H]
EC number: NA
Molecular weight: Translated: 36471; Mature: 36339
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDMTLKERLLNALEGKQVDKVPVCSVTQTGIVELMDQVGAPWPEAHSEPELMAKLAIAN CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC YEVSGLEAVRVPYCLTVLAEAMGCEVNMGTKNRQPSVTAHPYPKDLEGMEMPENLIDKGR CCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH IQAVLGSIKIIREKVGPDVPIIGGMEGPVTLASDLSSVKTFMKWSLKKPDLFEQVLDFAT HHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH EATIAYANSMALAGADVVAIADPVASPDLMSPDSFKNILQSRLQRFSSNVNSVTVLHVCG HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC NVNPILDYMADCGFEGLSVEEKIGSVKKAKEILGDRTRLVGNISSPFTLLPGPVDKIKTE CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEECCCCHHHHHHH ARQALDDGVDVLAPGCGIAPMTPVSHIKAMVEARDEYYA HHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure GDMTLKERLLNALEGKQVDKVPVCSVTQTGIVELMDQVGAPWPEAHSEPELMAKLAIAN CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHC YEVSGLEAVRVPYCLTVLAEAMGCEVNMGTKNRQPSVTAHPYPKDLEGMEMPENLIDKGR CCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH IQAVLGSIKIIREKVGPDVPIIGGMEGPVTLASDLSSVKTFMKWSLKKPDLFEQVLDFAT HHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH EATIAYANSMALAGADVVAIADPVASPDLMSPDSFKNILQSRLQRFSSNVNSVTVLHVCG HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECC NVNPILDYMADCGFEGLSVEEKIGSVKKAKEILGDRTRLVGNISSPFTLLPGPVDKIKTE CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEECCCCHHHHHHH ARQALDDGVDVLAPGCGIAPMTPVSHIKAMVEARDEYYA HHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8702528; 9642198; 7635826; 8617801; 9006042; 9195968; 10852929 [H]