Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
---|---|
Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is mtaC [H]
Identifier: 21226276
GI number: 21226276
Start: 238003
End: 238785
Strand: Direct
Name: mtaC [H]
Synonym: MM_0174
Alternate gene names: 21226276
Gene position: 238003-238785 (Clockwise)
Preceding gene: 21226275
Following gene: 21226277
Centisome position: 5.81
GC content: 43.3
Gene sequence:
>783_bases ATGGAGGTTAAATATTTGATAGAAATAGATCCCAGTATGATTCTGGTGCGTTATAATGTAAAAATGGAAAAGCAAATGAC ACCAGAAGACGCTGCAGAAGAACTTTACCCAAAAGATGAATTAATTTATCCGATAGCAAAGGCCATTTTTGAAGGCGAAG AAGATGACGTTGTAGAAGGACTGGAAAAGGCCATTAGCTCTGGAAAGGACCCAATCTCCCTAATAGATGACGCATTGATG GTTGGTATGGGGGTAGTCACCAGACTTTACGATGAAGGAATTATTTTCCTGCCAAACGTTATGATGTCTGCTGACGCTAT GCTGGAAGGTATCGACCATGTTAAGCAGAAGGCAGGAAAGGCACCCACAGTAAAAGGAAAAGTAGTATGCCATGTTGCAG AAGGTGACGTCCATGATATCGGAAAGAATATTGTGGCTGCACTACTGAGAGCAGCTGGCTATGACGTTGTAGACCTTGGA AGAGATGTTCCTGTAGATGAGGTCATCGCAACTGTTGAAAAAGAAAATCCCATGATGCTAACAGGTACTGCTCTGATGAC CACGACCATGTATGCATTCAAGGAAGTTAATGATAAGCTTATGGAGAAAGGCTACAGGATCCCATTTGCATGTGGTGGAG GTGCTGTGAATCAGGATTTCGTGTCCCAGTATGAGCTTGGGGTTTATGGTGAAGAAGCAGCCGATGCCGCTAAAATAGCC GATTTCATCAAGGCAAATGGGGACAACGTTGTGAAACTAAGGGAGAAATTCCATAGACACTGA
Upstream 100 bases:
>100_bases GAATTAGAGGGTATCTCGGTATTTTATAGGTCTTACCAGGAACTTTTTTAGCCCGACCTTTACCCCTACTTAAACCAGGG ATTGCTCCTCAAGAGCTTAA
Downstream 100 bases:
>100_bases GGAGGTGGAGTAGATGGCAGTAAACAGATGTACTAAAATGTCTTATGCAAGCGCAGATGAAATGATCTTTGGAAAAGCCG TCAAGCCCGTCAAAGCAGGG
Product: methanol corrinoid protein
Products: L-Methionine; 5,6,7,8-Tetrahydrofolate [C]
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MEVKYLIEIDPSMILVRYNVKMEKQMTPEDAAEELYPKDELIYPIAKAIFEGEEDDVVEGLEKAISSGKDPISLIDDALM VGMGVVTRLYDEGIIFLPNVMMSADAMLEGIDHVKQKAGKAPTVKGKVVCHVAEGDVHDIGKNIVAALLRAAGYDVVDLG RDVPVDEVIATVEKENPMMLTGTALMTTTMYAFKEVNDKLMEKGYRIPFACGGGAVNQDFVSQYELGVYGEEAADAAKIA DFIKANGDNVVKLREKFHRH
Sequences:
>Translated_260_residues MEVKYLIEIDPSMILVRYNVKMEKQMTPEDAAEELYPKDELIYPIAKAIFEGEEDDVVEGLEKAISSGKDPISLIDDALM VGMGVVTRLYDEGIIFLPNVMMSADAMLEGIDHVKQKAGKAPTVKGKVVCHVAEGDVHDIGKNIVAALLRAAGYDVVDLG RDVPVDEVIATVEKENPMMLTGTALMTTTMYAFKEVNDKLMEKGYRIPFACGGGAVNQDFVSQYELGVYGEEAADAAKIA DFIKANGDNVVKLREKFHRH >Mature_260_residues MEVKYLIEIDPSMILVRYNVKMEKQMTPEDAAEELYPKDELIYPIAKAIFEGEEDDVVEGLEKAISSGKDPISLIDDALM VGMGVVTRLYDEGIIFLPNVMMSADAMLEGIDHVKQKAGKAPTVKGKVVCHVAEGDVHDIGKNIVAALLRAAGYDVVDLG RDVPVDEVIATVEKENPMMLTGTALMTTTMYAFKEVNDKLMEKGYRIPFACGGGAVNQDFVSQYELGVYGEEAADAAKIA DFIKANGDNVVKLREKFHRH
Specific function: Acts as a methyl group carrier between mtbB and mtbA [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI169790923, Length=188, Percent_Identity=28.7234042553192, Blast_Score=76, Evalue=2e-14, Organism=Escherichia coli, GI1790450, Length=181, Percent_Identity=33.1491712707182, Blast_Score=100, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17535405, Length=163, Percent_Identity=31.2883435582822, Blast_Score=77, Evalue=7e-15,
Paralogues:
None
Copy number: 513 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 1320 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR003759 - InterPro: IPR012741 [H]
Pfam domain/function: PF02310 B12-binding; PF02607 B12-binding_2 [H]
EC number: 2.1.1.13 [C]
Molecular weight: Translated: 28549; Mature: 28549
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVKYLIEIDPSMILVRYNVKMEKQMTPEDAAEELYPKDELIYPIAKAIFEGEEDDVVEG CCEEEEEEECCCEEEEEECCEECCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHH LEKAISSGKDPISLIDDALMVGMGVVTRLYDEGIIFLPNVMMSADAMLEGIDHVKQKAGK HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHCC APTVKGKVVCHVAEGDVHDIGKNIVAALLRAAGYDVVDLGRDVPVDEVIATVEKENPMML CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHCCCCEEE TGTALMTTTMYAFKEVNDKLMEKGYRIPFACGGGAVNQDFVSQYELGVYGEEAADAAKIA EHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHH DFIKANGDNVVKLREKFHRH HHHHCCCCCHHHHHHHHCCC >Mature Secondary Structure MEVKYLIEIDPSMILVRYNVKMEKQMTPEDAAEELYPKDELIYPIAKAIFEGEEDDVVEG CCEEEEEEECCCEEEEEECCEECCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHH LEKAISSGKDPISLIDDALMVGMGVVTRLYDEGIIFLPNVMMSADAMLEGIDHVKQKAGK HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHCC APTVKGKVVCHVAEGDVHDIGKNIVAALLRAAGYDVVDLGRDVPVDEVIATVEKENPMML CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHCCCCEEE TGTALMTTTMYAFKEVNDKLMEKGYRIPFACGGGAVNQDFVSQYELGVYGEEAADAAKIA EHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHH DFIKANGDNVVKLREKFHRH HHHHCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: ATP; Cobinamide; S-adenosyl-L-methionine [C]
Metal ions: Mg2+ [C]
Kcat value (1/min): 500-780 [C]
Specific activity: 3.8
Km value (mM): 0.035 {S-methyltetrahydrofolate}} 0.06 {methyltetrahydrofolate}} 0.03 {methyltetrahydrofolate}} 0.0016 {S-adenosyl-L-methionine}} 0.00065 {S-adenosyl-L-methionine}} 0.016 {homocysteine}} [C]
Substrates: 5-Methyltetrahydrofolate; L-Homocysteine [C]
Specific reaction: 5-Methyltetrahydrofolate + L-Homocysteine --> L-Methionine + 5,6,7,8-Tetrahydrofolate [C]
General reaction: Methyl group transfer [C]
Inhibitor: 5, 6-Dimethyl benzimidazole; alpha-Ribazole 3'-phosphate; Be2+; Cobinamide; Propyl iodide; Sr2+ [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12125824 [H]