Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226231
Identifier: 21226231
GI number: 21226231
Start: 161203
End: 161967
Strand: Direct
Name: 21226231
Synonym: MM_0129
Alternate gene names: NA
Gene position: 161203-161967 (Clockwise)
Preceding gene: 21226227
Following gene: 21226233
Centisome position: 3.94
GC content: 43.14
Gene sequence:
>765_bases ATGGCCAGAAGCAAGGTAAAAAATCTTCTCCTTCTAAAGCAGATTCACAGTGCTGTAAGCCAGATCAAGAAAGGAAAACT GGATAAAGCTCTAGAGACTCTGGATAAAGCCGAAACATCTGCAAGGCAGTCGAAATCAACAGATGCTCTCTATTATATCC TTTTTACCCGCGGGGGCATTCTCTATTCGGCAAAAGAATACGACCAGGCTCTTGAAGCTTATGAAAAAGCCCTTGAAGCG GGTTCAGATCTCCTGAAAACTGACCCGGAAAATGCTGATTACCAGCATTACATGGGTACAACCCTGAGCAATACTGGAAA TCTCCTGAAAAAGAAAAGCGAAATTGATAAAGCTGACGAATATTATTCTCAAGCCCGAAAAATTTATTTTGATCTGATCA AAAAGGACCCTCAGAATGCTGTATACCAATCTTATGCCGGAGAAAACCTGAACAATTACGGTGAACTTCTTATGGAATCC GGCTCCCTCGAAAAAGCCTGTGAAATCCTGAGAGAAGCTATTGAAATTTACGAAAAACTTTATAAAGAGAAGCCTGACAA CCTCGGTTATCAGGCAGAACTTTCAGTCGCGCTCAGCCAGTTAGGAGGTTGCCTCAAACATCAGGTGCCTGAAGAATCTG GAGCGGCAAAAGAGAAACTTGAAAAAGCTCTGGAATTGCAGGAAAGTCTGCTGGACCAGCAGCCTGAAAATGAGAAGGTT AAAGAAGCCATCGCCCTGACAGAGGAAAGACTGAAAGGGCTTTGA
Upstream 100 bases:
>100_bases ATAAACATCACCTGACCTGAAACTCTGTATTGAGGAGTTTATCCAGTGCCTCACAATCGATATCGACAGTTATTTAAAAA ACAGGAAGGAATTCTCTTTC
Downstream 100 bases:
>100_bases AAGTCCTTCAAAGGTTTTTTCCGGAAAACAGCAGCATGTGAACATAAAGGAGAACCATCAGCCCGACGACCACCCCCCAT ATAAACTGGAGAGTAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MARSKVKNLLLLKQIHSAVSQIKKGKLDKALETLDKAETSARQSKSTDALYYILFTRGGILYSAKEYDQALEAYEKALEA GSDLLKTDPENADYQHYMGTTLSNTGNLLKKKSEIDKADEYYSQARKIYFDLIKKDPQNAVYQSYAGENLNNYGELLMES GSLEKACEILREAIEIYEKLYKEKPDNLGYQAELSVALSQLGGCLKHQVPEESGAAKEKLEKALELQESLLDQQPENEKV KEAIALTEERLKGL
Sequences:
>Translated_254_residues MARSKVKNLLLLKQIHSAVSQIKKGKLDKALETLDKAETSARQSKSTDALYYILFTRGGILYSAKEYDQALEAYEKALEA GSDLLKTDPENADYQHYMGTTLSNTGNLLKKKSEIDKADEYYSQARKIYFDLIKKDPQNAVYQSYAGENLNNYGELLMES GSLEKACEILREAIEIYEKLYKEKPDNLGYQAELSVALSQLGGCLKHQVPEESGAAKEKLEKALELQESLLDQQPENEKV KEAIALTEERLKGL >Mature_253_residues ARSKVKNLLLLKQIHSAVSQIKKGKLDKALETLDKAETSARQSKSTDALYYILFTRGGILYSAKEYDQALEAYEKALEAG SDLLKTDPENADYQHYMGTTLSNTGNLLKKKSEIDKADEYYSQARKIYFDLIKKDPQNAVYQSYAGENLNNYGELLMESG SLEKACEILREAIEIYEKLYKEKPDNLGYQAELSVALSQLGGCLKHQVPEESGAAKEKLEKALELQESLLDQQPENEKVK EAIALTEERLKGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28587; Mature: 28455
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSKVKNLLLLKQIHSAVSQIKKGKLDKALETLDKAETSARQSKSTDALYYILFTRGGI CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHEEHEECCCCC LYSAKEYDQALEAYEKALEAGSDLLKTDPENADYQHYMGTTLSNTGNLLKKKSEIDKADE EECHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH YYSQARKIYFDLIKKDPQNAVYQSYAGENLNNYGELLMESGSLEKACEILREAIEIYEKL HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH YKEKPDNLGYQAELSVALSQLGGCLKHQVPEESGAAKEKLEKALELQESLLDQQPENEKV HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH KEAIALTEERLKGL HHHHHHHHHHHCCC >Mature Secondary Structure ARSKVKNLLLLKQIHSAVSQIKKGKLDKALETLDKAETSARQSKSTDALYYILFTRGGI CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHEEHEECCCCC LYSAKEYDQALEAYEKALEAGSDLLKTDPENADYQHYMGTTLSNTGNLLKKKSEIDKADE EECHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH YYSQARKIYFDLIKKDPQNAVYQSYAGENLNNYGELLMESGSLEKACEILREAIEIYEKL HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH YKEKPDNLGYQAELSVALSQLGGCLKHQVPEESGAAKEKLEKALELQESLLDQQPENEKV HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHH KEAIALTEERLKGL HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA