Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226178
Identifier: 21226178
GI number: 21226178
Start: 101875
End: 102135
Strand: Direct
Name: 21226178
Synonym: MM_0076
Alternate gene names: NA
Gene position: 101875-102135 (Clockwise)
Preceding gene: 21226177
Following gene: 21226179
Centisome position: 2.49
GC content: 40.61
Gene sequence:
>261_bases ATGGGTGAAGTAGATATCAGTGAGATTGATCCGGCGTGTAAAAGTGCGCCGACAAAGACAATGAAAGAGGAAGGGGTAAC AAAAATACTTCATAATATTGATTCCTTTATAGCAACCGGGATAGTACCGAAGGACTGGAAGCCAGACATGATTTTTGAAG ATGAAATTGTCTGGAAAGGATGGCTCTATGCCCTCCAGTATGAGGAAAACAAAAACGGTGAGATAATTAAACACTATGTC TGCCTGTATCCAAATGACTGA
Upstream 100 bases:
>100_bases TCCAAACTTGTTTGATGGCTCTCAGAGGATTATATATGGATAGGACGTAGAGTTTTTATTGGGTCATAAACAACCCTATG ATAAAGGAGTGTGACTGACA
Downstream 100 bases:
>100_bases TGCTCTCAGGACCTCTAAAAAATCCTTTTTGAGGAAAAAACACACCAAAAATACTGTCAAATTAAGAGGCGTCCCGAATT GAACCCTATTTTTTAATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MGEVDISEIDPACKSAPTKTMKEEGVTKILHNIDSFIATGIVPKDWKPDMIFEDEIVWKGWLYALQYEENKNGEIIKHYV CLYPND
Sequences:
>Translated_86_residues MGEVDISEIDPACKSAPTKTMKEEGVTKILHNIDSFIATGIVPKDWKPDMIFEDEIVWKGWLYALQYEENKNGEIIKHYV CLYPND >Mature_85_residues GEVDISEIDPACKSAPTKTMKEEGVTKILHNIDSFIATGIVPKDWKPDMIFEDEIVWKGWLYALQYEENKNGEIIKHYVC LYPND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9904; Mature: 9773
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEVDISEIDPACKSAPTKTMKEEGVTKILHNIDSFIATGIVPKDWKPDMIFEDEIVWKG CCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCEEECE WLYALQYEENKNGEIIKHYVCLYPND EEEEEEECCCCCCCEEEEEEEEECCC >Mature Secondary Structure GEVDISEIDPACKSAPTKTMKEEGVTKILHNIDSFIATGIVPKDWKPDMIFEDEIVWKG CCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCEEECE WLYALQYEENKNGEIIKHYVCLYPND EEEEEEECCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA