Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226179
Identifier: 21226179
GI number: 21226179
Start: 102801
End: 103499
Strand: Direct
Name: 21226179
Synonym: MM_0077
Alternate gene names: NA
Gene position: 102801-103499 (Clockwise)
Preceding gene: 21226178
Following gene: 21226181
Centisome position: 2.51
GC content: 44.92
Gene sequence:
>699_bases ATGCTGCAAAGCATAAACCAGCTGAATCCGGACATTGTTGTAATTACAGGCGACCTGACAGAAAACGGGTTTTCAGCCGA ATATGATGGAGTAAAGATGTTTATTGACAGGATCGAGTGCAAAAACAGGGTCCTTGTCCCTGGAAATCACGACTCCAAAA ACGCCGGATATCTGCACTTTGAAGATCTTTTCGAAAACCGGTTCCAGACCCGGAACCTTGGAAATATGACTATTGTGGGA GCTGATTCCTCTCAACCTGACATTGATGACGGCCATCTGGGAAGGGAAAATTATGGCTGGATCAAAGAAGCTTTTTCAGG AGAAAATTTCAAGGTATTTGCCCTGCACCATCACCTTGTCCCTATTCCTCTTGCCGGCAGGGAAAATACTGTCCTTGTCG ATGCCGGAGATGTACTTGACCTCCTGAACAAATGCAGGGTAAACCTTGTACTTTGTGGGCACTGCCACATTCCGCATGTA TGGAACCTGAACAACATGCTTGTTGTAAACGCGGGAACTTTCTGTTCTTCCAAGACCAGAGGCAAAACCACTCAGTGCTT TAATCTGATCCAGGCAGAGAACAGCGAGAAAAACGGAAATGGAGAATCTGAAAAAATTGAAGACGGCGGCTGGAAAGTCC GTGTTTCAAGGGTTTTCCCTCAAGGAAATATTGAATTTATTACAGAAACAGTGATGTGA
Upstream 100 bases:
>100_bases AATTTCACTATAAAAGAGGGAATAGAAAATTATACAGATTGTACACCTATCAGATATTCATTATTCGGAAGCGTACTTTG TCCCGGAAATTGCCGAATCC
Downstream 100 bases:
>100_bases GGTGTTTAAAGCGCCTCCTTTTTTCCTCCAATTTCCTCCCTTTTTCCTCCAATTTCTCCCCTTTTTCCCCTAATTCCCTT ATCCCTCCCTTAAATTCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphohydrolase; LacZ Expression Regulatory Protein; Icc Related Protein; Transcriptional Regulator Icc Related Protein; 3 5'-Cyclic-Nucleotide Phosphodiesterase; 3 5-Cyclic-Nucleotide Phosphodiesterase; Calcineurin Superfamily Metallophosphoesterase; Phosphohydrolase Calcineurin-Like Superfamily; Calcineurin Superfamily Phosphohydrolase
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MLQSINQLNPDIVVITGDLTENGFSAEYDGVKMFIDRIECKNRVLVPGNHDSKNAGYLHFEDLFENRFQTRNLGNMTIVG ADSSQPDIDDGHLGRENYGWIKEAFSGENFKVFALHHHLVPIPLAGRENTVLVDAGDVLDLLNKCRVNLVLCGHCHIPHV WNLNNMLVVNAGTFCSSKTRGKTTQCFNLIQAENSEKNGNGESEKIEDGGWKVRVSRVFPQGNIEFITETVM
Sequences:
>Translated_232_residues MLQSINQLNPDIVVITGDLTENGFSAEYDGVKMFIDRIECKNRVLVPGNHDSKNAGYLHFEDLFENRFQTRNLGNMTIVG ADSSQPDIDDGHLGRENYGWIKEAFSGENFKVFALHHHLVPIPLAGRENTVLVDAGDVLDLLNKCRVNLVLCGHCHIPHV WNLNNMLVVNAGTFCSSKTRGKTTQCFNLIQAENSEKNGNGESEKIEDGGWKVRVSRVFPQGNIEFITETVM >Mature_232_residues MLQSINQLNPDIVVITGDLTENGFSAEYDGVKMFIDRIECKNRVLVPGNHDSKNAGYLHFEDLFENRFQTRNLGNMTIVG ADSSQPDIDDGHLGRENYGWIKEAFSGENFKVFALHHHLVPIPLAGRENTVLVDAGDVLDLLNKCRVNLVLCGHCHIPHV WNLNNMLVVNAGTFCSSKTRGKTTQCFNLIQAENSEKNGNGESEKIEDGGWKVRVSRVFPQGNIEFITETVM
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25930; Mature: 25930
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQSINQLNPDIVVITGDLTENGFSAEYDGVKMFIDRIECKNRVLVPGNHDSKNAGYLHF CCCCCHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCEEEH EDLFENRFQTRNLGNMTIVGADSSQPDIDDGHLGRENYGWIKEAFSGENFKVFALHHHLV HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCEE PIPLAGRENTVLVDAGDVLDLLNKCRVNLVLCGHCHIPHVWNLNNMLVVNAGTFCSSKTR EEEECCCCCEEEEECCHHHHHHHHCEEEEEEECCCCCCCEECCCCEEEEECCCCCCCCCC GKTTQCFNLIQAENSEKNGNGESEKIEDGGWKVRVSRVFPQGNIEFITETVM CCHHHHHHHHHCCCCCCCCCCCCCEECCCCEEEEEEEECCCCCEEEEEEECC >Mature Secondary Structure MLQSINQLNPDIVVITGDLTENGFSAEYDGVKMFIDRIECKNRVLVPGNHDSKNAGYLHF CCCCCHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCEEEH EDLFENRFQTRNLGNMTIVGADSSQPDIDDGHLGRENYGWIKEAFSGENFKVFALHHHLV HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEEECCEE PIPLAGRENTVLVDAGDVLDLLNKCRVNLVLCGHCHIPHVWNLNNMLVVNAGTFCSSKTR EEEECCCCCEEEEECCHHHHHHHHCEEEEEEECCCCCCCEECCCCEEEEECCCCCCCCCC GKTTQCFNLIQAENSEKNGNGESEKIEDGGWKVRVSRVFPQGNIEFITETVM CCHHHHHHHHHCCCCCCCCCCCCCEECCCCEEEEEEEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA