Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226123
Identifier: 21226123
GI number: 21226123
Start: 25929
End: 26186
Strand: Direct
Name: 21226123
Synonym: MM_0021
Alternate gene names: NA
Gene position: 25929-26186 (Clockwise)
Preceding gene: 21226120
Following gene: 21226124
Centisome position: 0.63
GC content: 37.6
Gene sequence:
>258_bases TTGTTTTTAATCAAAGAGTCTATACAATCTTATTTTCAAACAAATAAAAAACTAAAACAAGGTGAAACAAAAATGGCTTT TAATGACAGAAATATGTTTAGAGGAAATAATTTCGGCGCTCCCAGAGAAATGCACAAGGTAGTCTGTTCTGACTGCGGTG TTGAAACCGAAGTACCTTTCAAACCTGACCCCGAAAGACCTGTTTACTGCAGAGAGTGTCTTCCTAACCACAGGAAGCCC AGAGAAAACCGCTATTAA
Upstream 100 bases:
>100_bases CGGTTTTCATTTTTATAAGTAGATTTATATATTATAAGCGCTGTGTATGTGTGTTGATAAATTAAGAGACGTATGATAAT CTGCTATTAAAAACCAATTT
Downstream 100 bases:
>100_bases GTGTTATTCGTGTAACTTAGTTTACAAACACTTATTTCTTTTCCACTTTTTTAAATACACGTTAGACTCGGAATATACTT TTTACAGGCCAATTAATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MFLIKESIQSYFQTNKKLKQGETKMAFNDRNMFRGNNFGAPREMHKVVCSDCGVETEVPFKPDPERPVYCRECLPNHRKP RENRY
Sequences:
>Translated_85_residues MFLIKESIQSYFQTNKKLKQGETKMAFNDRNMFRGNNFGAPREMHKVVCSDCGVETEVPFKPDPERPVYCRECLPNHRKP RENRY >Mature_85_residues MFLIKESIQSYFQTNKKLKQGETKMAFNDRNMFRGNNFGAPREMHKVVCSDCGVETEVPFKPDPERPVYCRECLPNHRKP RENRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10115; Mature: 10115
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLIKESIQSYFQTNKKLKQGETKMAFNDRNMFRGNNFGAPREMHKVVCSDCGVETEVPF CCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC KPDPERPVYCRECLPNHRKPRENRY CCCCCCCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure MFLIKESIQSYFQTNKKLKQGETKMAFNDRNMFRGNNFGAPREMHKVVCSDCGVETEVPF CCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC KPDPERPVYCRECLPNHRKPRENRY CCCCCCCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA