Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226120
Identifier: 21226120
GI number: 21226120
Start: 21863
End: 22201
Strand: Direct
Name: 21226120
Synonym: MM_0018
Alternate gene names: NA
Gene position: 21863-22201 (Clockwise)
Preceding gene: 21226118
Following gene: 21226123
Centisome position: 0.53
GC content: 37.46
Gene sequence:
>339_bases TTGTTTTTAACCAAAGAGTCGTATACAATCTTATTTTTCAGCAATAAACAACAACTAAAAACCAAAGGTGAAACAAAATG GCCTTTAATGACAGAGGAAGTAGGGGAAGAGACAGCCACCGCGGAGGTTTCGGAGCTCCAAGGGAAATGCACAAGACAAA ATGTTCTGATTGTGGTGTTGAAACCGAAGTACCTTTCAAACCTGATCCGGAAAGACCGGTTTACTGCAGAGAATGTCTTC CTAAACACAGGAAACCAAGAGAAGACAGATACTAAGTGTTATAGTTTAACTGAGTTTATATTAATACTCATTCTTTTCCA CTTTTTTAATGTAACTTAG
Upstream 100 bases:
>100_bases ATTTTTTTTATAATTATAGAAATAGTTATATATTTTAAATGCCATGTAGATATATTGAAAATAAAAAGATGTATAACAAT CTGTTGTTAAAAACCAATTT
Downstream 100 bases:
>100_bases ATCCAGAATATATTTTTTCATAATCCAGAAATTTTGCAGATTGATAAAATCTTCTTCGGGACAATCAGTTTTACTTTTAT CGATAGGTTTTGCCCTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MFLTKESYTILFFSNKQQLKTKGETKWPLMTEEVGEETATAEVSELQGKCTRQNVLIVVLKPKYLSNLIRKDRFTAENVF LNTGNQEKTDTKCYSLTEFILILILFHFFNVT
Sequences:
>Translated_112_residues MFLTKESYTILFFSNKQQLKTKGETKWPLMTEEVGEETATAEVSELQGKCTRQNVLIVVLKPKYLSNLIRKDRFTAENVF LNTGNQEKTDTKCYSLTEFILILILFHFFNVT >Mature_112_residues MFLTKESYTILFFSNKQQLKTKGETKWPLMTEEVGEETATAEVSELQGKCTRQNVLIVVLKPKYLSNLIRKDRFTAENVF LNTGNQEKTDTKCYSLTEFILILILFHFFNVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13036; Mature: 13036
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLTKESYTILFFSNKQQLKTKGETKWPLMTEEVGEETATAEVSELQGKCTRQNVLIVVL CCCCCCCEEEEEECCCHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCEEEEEE KPKYLSNLIRKDRFTAENVFLNTGNQEKTDTKCYSLTEFILILILFHFFNVT CCHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFLTKESYTILFFSNKQQLKTKGETKWPLMTEEVGEETATAEVSELQGKCTRQNVLIVVL CCCCCCCEEEEEECCCHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCEEEEEE KPKYLSNLIRKDRFTAENVFLNTGNQEKTDTKCYSLTEFILILILFHFFNVT CCHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA