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The map label for this gene is dppC [H]

Identifier: 21226107

GI number: 21226107

Start: 5630

End: 6487

Strand: Direct

Name: dppC [H]

Synonym: MM_0005

Alternate gene names: 21226107

Gene position: 5630-6487 (Clockwise)

Preceding gene: 21226106

Following gene: 21226108

Centisome position: 0.14

GC content: 44.64

Gene sequence:

>858_bases
ATGAGCACTGCTGTTGTAACAGCTAACAAAGGAGTATTCCGGGGACTGAACCTGAGACAGAAGACCCTGCTGATTATAGG
TCTGACATCACTTTTGCTGCTTACGATAGTGGTTTCAAGTGTCACTATGGATGAAGATTCCTTGAAGACCGATTTTGGCT
CTAAAAACCTTAACCCTTCAGCTGAACATCCGTTTGGGACAGACTGGATGGGAAGGGACATGTTTATACGTACCGTCAAG
GGGCTTGGTTTAAGCATTCTGGTCGGAGCTTTTGCTTCTACAATCAGTACTGTACTGGCTGTAGTGTTGGGCCTTCTATC
AAGTGCAGGGAAAGCTGTAGATTCCTTTGTTTCCTGGCTGGTGGACCTGTTTCTTTCGATCCCTCACCTTCTTTTGATAA
TTCTTATCTCCATAGGGCTCGGAGGAGGAGCTTATGGAGTCATTATGGGTGTTGCGTTAACGCACTGGACAAGCCTGACA
AGGGTGGTCAGAGCAGAGATCAAGCAGCTCAAGACCCAGGAATACATCCATATTTCGAAAAACCTTGGAAAATCAAAATG
GTGGATAGCCACAAAACACATTCTACCCCATTTAATTCCGCAGATATTGCTTGGCACTATTTTGATGTTTCCTCATGCTA
TTCTGCACGAAGCTTCGGTCACATTCCTTGGATTTGGGCTTTCCCCTCACGAACCGGCAATTGGTATCATTTTATCAGAG
TCTATGAAATACCTTTCCGCAGGATACTGGTGGCTTGCATTTTTCCCAGGGTTATCACTCCTGATTGTGGTTCTGGCATT
TGACATGATAGGAGACAATCTGGGAAAAATAATTGATCCGAAAACTGCTCATGAATGA

Upstream 100 bases:

>100_bases
TTTTGCGGAAACCTGATTGCTGACACTATTTACGAATTCGTTGACCCCAGAATAAAACAGCAGGAGGCAACAGTATGAAC
ATTATAGAGGAGGCTGGATT

Downstream 100 bases:

>100_bases
GTTGTATGTGAAAATTTCAATCTAAAGGTGGGAACATGAAAAATAAAGCTAAGAATAATGCTGAAGAAAGCAGGAAAACT
GAAGCCCTGTTAAAAGTAAA

Product: peptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSTAVVTANKGVFRGLNLRQKTLLIIGLTSLLLLTIVVSSVTMDEDSLKTDFGSKNLNPSAEHPFGTDWMGRDMFIRTVK
GLGLSILVGAFASTISTVLAVVLGLLSSAGKAVDSFVSWLVDLFLSIPHLLLIILISIGLGGGAYGVIMGVALTHWTSLT
RVVRAEIKQLKTQEYIHISKNLGKSKWWIATKHILPHLIPQILLGTILMFPHAILHEASVTFLGFGLSPHEPAIGIILSE
SMKYLSAGYWWLAFFPGLSLLIVVLAFDMIGDNLGKIIDPKTAHE

Sequences:

>Translated_285_residues
MSTAVVTANKGVFRGLNLRQKTLLIIGLTSLLLLTIVVSSVTMDEDSLKTDFGSKNLNPSAEHPFGTDWMGRDMFIRTVK
GLGLSILVGAFASTISTVLAVVLGLLSSAGKAVDSFVSWLVDLFLSIPHLLLIILISIGLGGGAYGVIMGVALTHWTSLT
RVVRAEIKQLKTQEYIHISKNLGKSKWWIATKHILPHLIPQILLGTILMFPHAILHEASVTFLGFGLSPHEPAIGIILSE
SMKYLSAGYWWLAFFPGLSLLIVVLAFDMIGDNLGKIIDPKTAHE
>Mature_284_residues
STAVVTANKGVFRGLNLRQKTLLIIGLTSLLLLTIVVSSVTMDEDSLKTDFGSKNLNPSAEHPFGTDWMGRDMFIRTVKG
LGLSILVGAFASTISTVLAVVLGLLSSAGKAVDSFVSWLVDLFLSIPHLLLIILISIGLGGGAYGVIMGVALTHWTSLTR
VVRAEIKQLKTQEYIHISKNLGKSKWWIATKHILPHLIPQILLGTILMFPHAILHEASVTFLGFGLSPHEPAIGIILSES
MKYLSAGYWWLAFFPGLSLLIVVLAFDMIGDNLGKIIDPKTAHE

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=253, Percent_Identity=29.6442687747036, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1787054, Length=266, Percent_Identity=31.203007518797, Blast_Score=127, Evalue=6e-31,
Organism=Escherichia coli, GI1789889, Length=245, Percent_Identity=30.6122448979592, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1787498, Length=236, Percent_Identity=30.0847457627119, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1789964, Length=227, Percent_Identity=34.8017621145374, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788505, Length=230, Percent_Identity=30, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787549, Length=215, Percent_Identity=26.046511627907, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30908; Mature: 30777

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAVVTANKGVFRGLNLRQKTLLIIGLTSLLLLTIVVSSVTMDEDSLKTDFGSKNLNPS
CCCEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
AEHPFGTDWMGRDMFIRTVKGLGLSILVGAFASTISTVLAVVLGLLSSAGKAVDSFVSWL
CCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VDLFLSIPHLLLIILISIGLGGGAYGVIMGVALTHWTSLTRVVRAEIKQLKTQEYIHISK
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLGKSKWWIATKHILPHLIPQILLGTILMFPHAILHEASVTFLGFGLSPHEPAIGIILSE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEHHHHH
SMKYLSAGYWWLAFFPGLSLLIVVLAFDMIGDNLGKIIDPKTAHE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC
>Mature Secondary Structure 
STAVVTANKGVFRGLNLRQKTLLIIGLTSLLLLTIVVSSVTMDEDSLKTDFGSKNLNPS
CCEEEECCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
AEHPFGTDWMGRDMFIRTVKGLGLSILVGAFASTISTVLAVVLGLLSSAGKAVDSFVSWL
CCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VDLFLSIPHLLLIILISIGLGGGAYGVIMGVALTHWTSLTRVVRAEIKQLKTQEYIHISK
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLGKSKWWIATKHILPHLIPQILLGTILMFPHAILHEASVTFLGFGLSPHEPAIGIILSE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEHHHHH
SMKYLSAGYWWLAFFPGLSLLIVVLAFDMIGDNLGKIIDPKTAHE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]