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The map label for this gene is xp55 [H]

Identifier: 21226103

GI number: 21226103

Start: 522

End: 2126

Strand: Direct

Name: xp55 [H]

Synonym: MM_0001

Alternate gene names: 21226103

Gene position: 522-2126 (Clockwise)

Preceding gene: NA

Following gene: 21226104

Centisome position: 0.01

GC content: 47.04

Gene sequence:

>1605_bases
ATGTCCAGCCCTGCAGCAGATTCGAAACCCACAGAACAGACTTCCCAGGTTGCCGGGGAAACGGCGCTCCAGGGATCTGA
AGAACTGAGTTCTCCAGGGTCTGACGAACTGGTTGCAGCCGTAGGGACCCATGGCGGAGAGCCGGAAACCGGATTTGATC
CTATCTCCGGATGGGGTTATAACCACGAACCACTGGTCCAGAGCACGCTTTTCAAAAAGGACAGTGAGGCAAATCTGATC
AACGATCTGGCTACGGACTATACTATTAGCGATGATGGGCTGAAATGGACTGTCAAAATAAGGAGCGATGTAAAATTCCA
TGATGGAGAACCTCTAACAGCTAAGGACGTAGCCTTCACGTTTAATACGGCAGCAGATGCTAGCGGCAGTGTGGATTTGT
CCGTGCTGGAAAAAGCCACAGCAGTCGATGATTATACCGTTGAATTTAACTTGAACGACCCTCAGTCTACCTTCATCAAT
AAACTGGTAGCTCTTGGCATTGTCCCTGAACATGCTTACAACTCTGAAACTTACGGGTCCAATCCAGCAGGTTCGGGACC
ATACAAATTTGTACAGTGGGATAAAGGGCAGCAGGTAATCTTTGAAGCAAATCCGGACTATTACGGACAGGAACCGTACT
TTAAAAAGCTGACAATACTCTTTATGGACTCTGATGCTGCTTTTGCGGCAGCTAAATCCGGACAGATCGATCTGGCTGAG
GTTCCTTCCACATTTGCCGATCAGAAAGTTGATGGAATGAAAATAGTTTCTCTGGAGTCTATTGATGCCCGTGGAATAAG
TTTCCCGATGAACCCGAATACTGGAGAAAAAACTGAAAACGGCTACGTAATTGGAAACGATGTGACTTCTGATCCTGCAA
TAAGAAAAGCTCTGAACATCGGGATAGACAGGCAGGCACTGGTTGACGGTGCTTTGAACGGACAGGGAGAAGAAGAATTC
ACAGGCGTGGACAAACTGCCCTGGGGTAATAAAGAAGCCATTTTCGAAGACGGAGATATAGAAGGAGCAAAGAAAATCCT
TGCCGAAGGCGGCTGGACTGATACTGACGGAGACGGCATTGTTGAGAAAAGCGACCTGAAAGCCGAATTTACTCTCCTAT
ACCCTGCAAATGCCCAGGAAAGGCAGGCACTGGCGGTTTCAATGGGTGAAGAAGCTAAAAAACTGGGTATAAATATTAAA
GTTGAAGGTAAGAGCTGGGATGAAATTTACACCCTTTGCTATTCGACTCCAAATGTCTGGGGTTACGGATCACTGGACCC
TACTGACATATACTTAAGATACTACAGCAAGAGCTACGATCCCTCAACCCGTAATAACGTAATAATGTACAACAATCCTG
CTGTGGACAATTACCTGAGGACAGCCATAACCAGTCCTGACCAGGAAGCAGCCAACAAAAACTGGCAGCTGGCTGCATGG
GACGGGACAACAGGATTCTCCGCAGAAGGGGACGCTTCCTGGATGTGGATGGCAACCATTAATTATGTCTATATAATGGA
TGAAGACCTTGATATCGGAACTCCAAAAATACAGCCCCATGGGGCAGATATCTTTGGCAGCATTCTGGAATGGAAACGTG
CATGA

Upstream 100 bases:

>100_bases
TAATAAAAAACAAGGAGGAGTTTTGATTAAGAAAAATCAGCAGTATTTGCTCATAGGCTCAATAATCATAGTTATAGCAG
CTGCCATTATTGTCAGCTCT

Downstream 100 bases:

>100_bases
GATTAAACAGGGATTTGAGTATTCACTCAAATCCTCTTATTTTTACAGGTTATTCGGGGAGACTATCTTCATTCAATAGA
CAGGATCAAAATCGTTTAAT

Product: peptide ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 533

Protein sequence:

>534_residues
MSSPAADSKPTEQTSQVAGETALQGSEELSSPGSDELVAAVGTHGGEPETGFDPISGWGYNHEPLVQSTLFKKDSEANLI
NDLATDYTISDDGLKWTVKIRSDVKFHDGEPLTAKDVAFTFNTAADASGSVDLSVLEKATAVDDYTVEFNLNDPQSTFIN
KLVALGIVPEHAYNSETYGSNPAGSGPYKFVQWDKGQQVIFEANPDYYGQEPYFKKLTILFMDSDAAFAAAKSGQIDLAE
VPSTFADQKVDGMKIVSLESIDARGISFPMNPNTGEKTENGYVIGNDVTSDPAIRKALNIGIDRQALVDGALNGQGEEEF
TGVDKLPWGNKEAIFEDGDIEGAKKILAEGGWTDTDGDGIVEKSDLKAEFTLLYPANAQERQALAVSMGEEAKKLGINIK
VEGKSWDEIYTLCYSTPNVWGYGSLDPTDIYLRYYSKSYDPSTRNNVIMYNNPAVDNYLRTAITSPDQEAANKNWQLAAW
DGTTGFSAEGDASWMWMATINYVYIMDEDLDIGTPKIQPHGADIFGSILEWKRA

Sequences:

>Translated_534_residues
MSSPAADSKPTEQTSQVAGETALQGSEELSSPGSDELVAAVGTHGGEPETGFDPISGWGYNHEPLVQSTLFKKDSEANLI
NDLATDYTISDDGLKWTVKIRSDVKFHDGEPLTAKDVAFTFNTAADASGSVDLSVLEKATAVDDYTVEFNLNDPQSTFIN
KLVALGIVPEHAYNSETYGSNPAGSGPYKFVQWDKGQQVIFEANPDYYGQEPYFKKLTILFMDSDAAFAAAKSGQIDLAE
VPSTFADQKVDGMKIVSLESIDARGISFPMNPNTGEKTENGYVIGNDVTSDPAIRKALNIGIDRQALVDGALNGQGEEEF
TGVDKLPWGNKEAIFEDGDIEGAKKILAEGGWTDTDGDGIVEKSDLKAEFTLLYPANAQERQALAVSMGEEAKKLGINIK
VEGKSWDEIYTLCYSTPNVWGYGSLDPTDIYLRYYSKSYDPSTRNNVIMYNNPAVDNYLRTAITSPDQEAANKNWQLAAW
DGTTGFSAEGDASWMWMATINYVYIMDEDLDIGTPKIQPHGADIFGSILEWKRA
>Mature_533_residues
SSPAADSKPTEQTSQVAGETALQGSEELSSPGSDELVAAVGTHGGEPETGFDPISGWGYNHEPLVQSTLFKKDSEANLIN
DLATDYTISDDGLKWTVKIRSDVKFHDGEPLTAKDVAFTFNTAADASGSVDLSVLEKATAVDDYTVEFNLNDPQSTFINK
LVALGIVPEHAYNSETYGSNPAGSGPYKFVQWDKGQQVIFEANPDYYGQEPYFKKLTILFMDSDAAFAAAKSGQIDLAEV
PSTFADQKVDGMKIVSLESIDARGISFPMNPNTGEKTENGYVIGNDVTSDPAIRKALNIGIDRQALVDGALNGQGEEEFT
GVDKLPWGNKEAIFEDGDIEGAKKILAEGGWTDTDGDGIVEKSDLKAEFTLLYPANAQERQALAVSMGEEAKKLGINIKV
EGKSWDEIYTLCYSTPNVWGYGSLDPTDIYLRYYSKSYDPSTRNNVIMYNNPAVDNYLRTAITSPDQEAANKNWQLAAWD
GTTGFSAEGDASWMWMATINYVYIMDEDLDIGTPKIQPHGADIFGSILEWKRA

Specific function: Required for transport of an unidentified substrate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787762, Length=449, Percent_Identity=25.3897550111359, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1789887, Length=371, Percent_Identity=25.6064690026954, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1787052, Length=312, Percent_Identity=29.1666666666667, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1789966, Length=400, Percent_Identity=23.75, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI87082063, Length=425, Percent_Identity=22.5882352941176, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 58155; Mature: 58024

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPAADSKPTEQTSQVAGETALQGSEELSSPGSDELVAAVGTHGGEPETGFDPISGWGY
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
NHEPLVQSTLFKKDSEANLINDLATDYTISDDGLKWTVKIRSDVKFHDGEPLTAKDVAFT
CCCHHHHHHHHCCCCCCHHHHHHHCCEEECCCCEEEEEEEECCCEECCCCCCCCCEEEEE
FNTAADASGSVDLSVLEKATAVDDYTVEFNLNDPQSTFINKLVALGIVPEHAYNSETYGS
EECCCCCCCCEEHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
NPAGSGPYKFVQWDKGQQVIFEANPDYYGQEPYFKKLTILFMDSDAAFAAAKSGQIDLAE
CCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEECCCCCEEHHH
VPSTFADQKVDGMKIVSLESIDARGISFPMNPNTGEKTENGYVIGNDVTSDPAIRKALNI
CCCHHHCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHC
GIDRQALVDGALNGQGEEEFTGVDKLPWGNKEAIFEDGDIEGAKKILAEGGWTDTDGDGI
CCCHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCCC
VEKSDLKAEFTLLYPANAQERQALAVSMGEEAKKLGINIKVEGKSWDEIYTLCYSTPNVW
EECCCCCEEEEEEECCCCCHHHEEEECCCCHHHHCCCEEEECCCCHHHEEEEEECCCCCC
GYGSLDPTDIYLRYYSKSYDPSTRNNVIMYNNPAVDNYLRTAITSPDQEAANKNWQLAAW
CCCCCCHHEEEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHCCCCCEEEEE
DGTTGFSAEGDASWMWMATINYVYIMDEDLDIGTPKIQPHGADIFGSILEWKRA
CCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
SSPAADSKPTEQTSQVAGETALQGSEELSSPGSDELVAAVGTHGGEPETGFDPISGWGY
CCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
NHEPLVQSTLFKKDSEANLINDLATDYTISDDGLKWTVKIRSDVKFHDGEPLTAKDVAFT
CCCHHHHHHHHCCCCCCHHHHHHHCCEEECCCCEEEEEEEECCCEECCCCCCCCCEEEEE
FNTAADASGSVDLSVLEKATAVDDYTVEFNLNDPQSTFINKLVALGIVPEHAYNSETYGS
EECCCCCCCCEEHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
NPAGSGPYKFVQWDKGQQVIFEANPDYYGQEPYFKKLTILFMDSDAAFAAAKSGQIDLAE
CCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCCEEECCCCCEEHHH
VPSTFADQKVDGMKIVSLESIDARGISFPMNPNTGEKTENGYVIGNDVTSDPAIRKALNI
CCCHHHCCCCCCEEEEEEECCCCCCEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHC
GIDRQALVDGALNGQGEEEFTGVDKLPWGNKEAIFEDGDIEGAKKILAEGGWTDTDGDGI
CCCHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCCC
VEKSDLKAEFTLLYPANAQERQALAVSMGEEAKKLGINIKVEGKSWDEIYTLCYSTPNVW
EECCCCCEEEEEEECCCCCHHHEEEECCCCHHHHCCCEEEECCCCHHHEEEEEECCCCCC
GYGSLDPTDIYLRYYSKSYDPSTRNNVIMYNNPAVDNYLRTAITSPDQEAANKNWQLAAW
CCCCCCHHEEEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCHHHCCCCCEEEEE
DGTTGFSAEGDASWMWMATINYVYIMDEDLDIGTPKIQPHGADIFGSILEWKRA
CCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]