| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094718
Identifier: 20094718
GI number: 20094718
Start: 1280956
End: 1281933
Strand: Reverse
Name: 20094718
Synonym: MK1282
Alternate gene names: NA
Gene position: 1281933-1280956 (Counterclockwise)
Preceding gene: 20094719
Following gene: 20094717
Centisome position: 75.63
GC content: 71.68
Gene sequence:
>978_bases GTGCCCGACCCCACCCTGACCCTGCTCCTGGTCGCCCTCCAGCACCCGACCCACGGGGACTGCAGCGCCGTCCTCGTCCG CACCCACGGGGGCTACGCCGTCGCCTACCGGCGGGACGCGACCTACCGGGCGACCCTTCACCTGGAGGTGACGACGTGGG CCGGTCGTGGGGCCCTGCGGGAGTACAAGCTCAGGAACGGCCGCTTCTGCCACACGGTGATCACCGAGGACGGCTGGGTG ATCACGATAGGCGGCGCGGACGACGAGTCGGTCAACCGCGGGCTCGAGGAGCTGGGCGAGCGCGTCGTACTCGCGGGCGA GGTGACCGAGTGGGACCTCGAGCGCGCCCTGGACCTCCTCCGGAGGATCGGGATCGGCCACTTCCTCGTCGGATCGCCGG ACGGGACCGTGGGCGTCGCCGTCTACCGCTACGGTAGGACCCTGCTGGAGGTACTCCGGCTGGCCGAGGGCGAGTACGTG CTCGTCCCGAACGACCCGAGGTACTACGACCGAGGGAGGTTCGAGGACTACGACACCGACCCCGTCCGGGCGGCGGCCGA GATCGCCGGGCTCGACCCGTACGGCGTCAACCGCCGGGACGTGCTCGTCTACTTGGTGGAACCCCGTGACGGCCGCGCGA CCGTCCGAGTGTGGGTCGCCTACGACGGGGGAGCGCTGCTCGGGAGGCGCGGAGCCGGACCCGACCCCGTGGAGTTCATG GGTTGCTACGTACCGGCCGAGTGGATCCCGAGACTACCCGACCTCTTCGAGCTCGGGACGGTGACGCTGGGACGGCCGAT GCCGACTCGCGCGCCGGAGGGGAACTCGAGGTCCGCGGGCTCCCCGGTGTGGTGGCCGGTGCCCGTACCCGCGGGTCGCC CTGGGGGAAGTCGATGGCGTCGCGCGACGGACGACCTCCACGCCCGCGATCCTACTACGGAGGGCGTTCGCAGGGTAGGA ACCGCGGTCGACCCGTGA
Upstream 100 bases:
>100_bases ACCGTGGGGGTAGTACCCGCGGCCGCGTGACCCGCGGGAGGGTCCCCGACGTGGACACGGACGCACCTCCAACCCGGGCG AACCCGCGGGGGAGGATCGC
Downstream 100 bases:
>100_bases TGGCACGACGGTCTGGGATAAACAAGAAACTAAAATGTTAAACTAAAATGTTCTCTTATAATAAGTGGCGGTTTCTATAG ATCGTCCGAACCCGCGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MPDPTLTLLLVALQHPTHGDCSAVLVRTHGGYAVAYRRDATYRATLHLEVTTWAGRGALREYKLRNGRFCHTVITEDGWV ITIGGADDESVNRGLEELGERVVLAGEVTEWDLERALDLLRRIGIGHFLVGSPDGTVGVAVYRYGRTLLEVLRLAEGEYV LVPNDPRYYDRGRFEDYDTDPVRAAAEIAGLDPYGVNRRDVLVYLVEPRDGRATVRVWVAYDGGALLGRRGAGPDPVEFM GCYVPAEWIPRLPDLFELGTVTLGRPMPTRAPEGNSRSAGSPVWWPVPVPAGRPGGSRWRRATDDLHARDPTTEGVRRVG TAVDP
Sequences:
>Translated_325_residues MPDPTLTLLLVALQHPTHGDCSAVLVRTHGGYAVAYRRDATYRATLHLEVTTWAGRGALREYKLRNGRFCHTVITEDGWV ITIGGADDESVNRGLEELGERVVLAGEVTEWDLERALDLLRRIGIGHFLVGSPDGTVGVAVYRYGRTLLEVLRLAEGEYV LVPNDPRYYDRGRFEDYDTDPVRAAAEIAGLDPYGVNRRDVLVYLVEPRDGRATVRVWVAYDGGALLGRRGAGPDPVEFM GCYVPAEWIPRLPDLFELGTVTLGRPMPTRAPEGNSRSAGSPVWWPVPVPAGRPGGSRWRRATDDLHARDPTTEGVRRVG TAVDP >Mature_324_residues PDPTLTLLLVALQHPTHGDCSAVLVRTHGGYAVAYRRDATYRATLHLEVTTWAGRGALREYKLRNGRFCHTVITEDGWVI TIGGADDESVNRGLEELGERVVLAGEVTEWDLERALDLLRRIGIGHFLVGSPDGTVGVAVYRYGRTLLEVLRLAEGEYVL VPNDPRYYDRGRFEDYDTDPVRAAAEIAGLDPYGVNRRDVLVYLVEPRDGRATVRVWVAYDGGALLGRRGAGPDPVEFMG CYVPAEWIPRLPDLFELGTVTLGRPMPTRAPEGNSRSAGSPVWWPVPVPAGRPGGSRWRRATDDLHARDPTTEGVRRVGT AVDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35847; Mature: 35716
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDPTLTLLLVALQHPTHGDCSAVLVRTHGGYAVAYRRDATYRATLHLEVTTWAGRGALR CCCCHHEEEEEECCCCCCCCCEEEEEEECCCEEEEEECCCEEEEEEEEEEEEECCCCCHH EYKLRNGRFCHTVITEDGWVITIGGADDESVNRGLEELGERVVLAGEVTEWDLERALDLL HHHCCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHH RRIGIGHFLVGSPDGTVGVAVYRYGRTLLEVLRLAEGEYVLVPNDPRYYDRGRFEDYDTD HHCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC PVRAAAEIAGLDPYGVNRRDVLVYLVEPRDGRATVRVWVAYDGGALLGRRGAGPDPVEFM HHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCEEEECCCCCCCHHHHE GCYVPAEWIPRLPDLFELGTVTLGRPMPTRAPEGNSRSAGSPVWWPVPVPAGRPGGSRWR EEECCHHHHCCCCCHHHHCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHH RATDDLHARDPTTEGVRRVGTAVDP HCCCCCCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure PDPTLTLLLVALQHPTHGDCSAVLVRTHGGYAVAYRRDATYRATLHLEVTTWAGRGALR CCCHHEEEEEECCCCCCCCCEEEEEEECCCEEEEEECCCEEEEEEEEEEEEECCCCCHH EYKLRNGRFCHTVITEDGWVITIGGADDESVNRGLEELGERVVLAGEVTEWDLERALDLL HHHCCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHH RRIGIGHFLVGSPDGTVGVAVYRYGRTLLEVLRLAEGEYVLVPNDPRYYDRGRFEDYDTD HHCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCC PVRAAAEIAGLDPYGVNRRDVLVYLVEPRDGRATVRVWVAYDGGALLGRRGAGPDPVEFM HHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCEEEECCCCCCCHHHHE GCYVPAEWIPRLPDLFELGTVTLGRPMPTRAPEGNSRSAGSPVWWPVPVPAGRPGGSRWR EEECCHHHHCCCCCHHHHCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHH RATDDLHARDPTTEGVRRVGTAVDP HCCCCCCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA