| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094719
Identifier: 20094719
GI number: 20094719
Start: 1282214
End: 1283809
Strand: Reverse
Name: 20094719
Synonym: MK1283
Alternate gene names: NA
Gene position: 1283809-1282214 (Counterclockwise)
Preceding gene: 20094720
Following gene: 20094718
Centisome position: 75.74
GC content: 63.22
Gene sequence:
>1596_bases TTGAGGTCCTCGGGCGTCCTCATCACGCACCTCCTCCTCTTTTCCCTAACCCTCCCGATCCCCGCGCACTCGACACCGGT ACTCCACGGTGACACCGCGACCGACTGCCTCGAAGCCCTAACACGCCTGTCCCACGAGGCCCGCCACCTGGATTCCTACC ACCTAGTACTGATAGGCAGCCCTCCATACCGATACCTCACCGTGCTCCCGAACGCCGGACTCGTGACGGACGACCCCTCC ACGAACGCCTCCCTCCACGGACGCGAGCTCGGGGTTCGAACCCCCTTCGGGGAAGTCCGCACGACCCTCCGAGCGCCCGC CGTGATCCTCGGACTCGTCAACCTGGAAGACACCGACGTCGACCCATCGTACGTGACCGTCCTCTGGAACGATCGAGTAG CCTTCCTGACAACGTACTCCGTCGTCTTCGCGAGACTCGAGTCCGACGGGAGGATCGAACTCGAACGGCAGGCGTGGTTC GACAAGTACCGGGACGTACTCCCCGTCTACAGGCCGAGAGCCGATTACTGCGAGTACCGGTTCGACACCCGAGACGGTAC CGTCGAGGTCAAGTTCTACGACCTATGGGGCAGGACCCTGGTCACCGTCCGGGCGAACCTCGGCGACGAGAACGCGACCT TCGACGAGACGACCGCCGACCCGGAGACCCTGGAGGAGATCGAGTCCAAGCTGGCCCACCTCCCCGAGAGGCTCCGGGAG TACTGGAGCTTCCTACTGGTCAGGACCCCCGAGGGCGTCGAACCCGTCGCGATCACGATCGACCCGCTCGAACTCGCTCC CGACTCCCACCTCGCCGAGTTCCTGAGGACCCTCAACCTGGCGGACAGGCTCCAGCTGAGCAGCCCGCTCTCGCTCGCGC CCGCGCTACTCGCCCTCACCGCCAGACTGTACGCCGCGGTCGGTCTGAGCGTCGAGATCCGGTGGGGGCGCGACGACGTC TTCGAGCGGTTGTACGACGAGGTGTGGTCGGCACTTCCGGTGGCCGCGTGCTGGAACCTGTTGTACCCGCTGGTCTCCAA CGCGATCCTGAAGTCGATCGTGGAGCGGTTGCGATCGTTCGGACTCCCGGCGATCGTCCCGTGCTGCGTGAGCGTGGCGG TGTGGGAGTGGGTGACCGAGAACGCCGTCTTCCCCGTCCTGGAGCGGTGGTACTGGGGTTATACGGTTTCAATGGGGATG GCTCCCGTCGTGGAGGAGCCGTTCAAGCGGTTGGTGGCGGTCGAGTTCGGGATCCCCAGGATCGTCTCGGGGGCGGTGTA CGGTCTCCTCGAGGGCCTCTGGCACTGGGTGTCGGGGATAGAGACTGGCCCCCTACTATCGATACTGTTGGACAAGGCAG CGACCCATGCACTCCTCACCGTCCTTCCATTACCACTGGCCATGGAATTACACTCTCGCACGTTCGGTATAATCGGCGGT ACGACCGCATTCCAGGATTCGATCCACCTACTCAACGGGATAATTACCGGGGTACTCACCGGTGACGTACCCACTATACT CGACTTACTCTACTACACGGCCCTGTCTGTTATATTAGAGAACACCTTCGGAATACCGGTAACGCCGGGGTTGTAA
Upstream 100 bases:
>100_bases GAGGTCACCGGGGTGCCGGAGGCCGCGCAGGGACGGTGGAGCTCCGAGCCGCCTCACCGATCCCAGTCCTAGTGACGGCG TTCGGGAGGGGACCGACGGC
Downstream 100 bases:
>100_bases ACCCGCATGAACTGCCCGCGGAGGGCGACGATACGACGCCGGTACGGCCTCCGATGGGGTTTCTAGTGTGTCGGTCGGGG CGTCACGGATAGGGTTAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MRSSGVLITHLLLFSLTLPIPAHSTPVLHGDTATDCLEALTRLSHEARHLDSYHLVLIGSPPYRYLTVLPNAGLVTDDPS TNASLHGRELGVRTPFGEVRTTLRAPAVILGLVNLEDTDVDPSYVTVLWNDRVAFLTTYSVVFARLESDGRIELERQAWF DKYRDVLPVYRPRADYCEYRFDTRDGTVEVKFYDLWGRTLVTVRANLGDENATFDETTADPETLEEIESKLAHLPERLRE YWSFLLVRTPEGVEPVAITIDPLELAPDSHLAEFLRTLNLADRLQLSSPLSLAPALLALTARLYAAVGLSVEIRWGRDDV FERLYDEVWSALPVAACWNLLYPLVSNAILKSIVERLRSFGLPAIVPCCVSVAVWEWVTENAVFPVLERWYWGYTVSMGM APVVEEPFKRLVAVEFGIPRIVSGAVYGLLEGLWHWVSGIETGPLLSILLDKAATHALLTVLPLPLAMELHSRTFGIIGG TTAFQDSIHLLNGIITGVLTGDVPTILDLLYYTALSVILENTFGIPVTPGL
Sequences:
>Translated_531_residues MRSSGVLITHLLLFSLTLPIPAHSTPVLHGDTATDCLEALTRLSHEARHLDSYHLVLIGSPPYRYLTVLPNAGLVTDDPS TNASLHGRELGVRTPFGEVRTTLRAPAVILGLVNLEDTDVDPSYVTVLWNDRVAFLTTYSVVFARLESDGRIELERQAWF DKYRDVLPVYRPRADYCEYRFDTRDGTVEVKFYDLWGRTLVTVRANLGDENATFDETTADPETLEEIESKLAHLPERLRE YWSFLLVRTPEGVEPVAITIDPLELAPDSHLAEFLRTLNLADRLQLSSPLSLAPALLALTARLYAAVGLSVEIRWGRDDV FERLYDEVWSALPVAACWNLLYPLVSNAILKSIVERLRSFGLPAIVPCCVSVAVWEWVTENAVFPVLERWYWGYTVSMGM APVVEEPFKRLVAVEFGIPRIVSGAVYGLLEGLWHWVSGIETGPLLSILLDKAATHALLTVLPLPLAMELHSRTFGIIGG TTAFQDSIHLLNGIITGVLTGDVPTILDLLYYTALSVILENTFGIPVTPGL >Mature_531_residues MRSSGVLITHLLLFSLTLPIPAHSTPVLHGDTATDCLEALTRLSHEARHLDSYHLVLIGSPPYRYLTVLPNAGLVTDDPS TNASLHGRELGVRTPFGEVRTTLRAPAVILGLVNLEDTDVDPSYVTVLWNDRVAFLTTYSVVFARLESDGRIELERQAWF DKYRDVLPVYRPRADYCEYRFDTRDGTVEVKFYDLWGRTLVTVRANLGDENATFDETTADPETLEEIESKLAHLPERLRE YWSFLLVRTPEGVEPVAITIDPLELAPDSHLAEFLRTLNLADRLQLSSPLSLAPALLALTARLYAAVGLSVEIRWGRDDV FERLYDEVWSALPVAACWNLLYPLVSNAILKSIVERLRSFGLPAIVPCCVSVAVWEWVTENAVFPVLERWYWGYTVSMGM APVVEEPFKRLVAVEFGIPRIVSGAVYGLLEGLWHWVSGIETGPLLSILLDKAATHALLTVLPLPLAMELHSRTFGIIGG TTAFQDSIHLLNGIITGVLTGDVPTILDLLYYTALSVILENTFGIPVTPGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59054; Mature: 59054
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSGVLITHLLLFSLTLPIPAHSTPVLHGDTATDCLEALTRLSHEARHLDSYHLVLIGS CCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC PPYRYLTVLPNAGLVTDDPSTNASLHGRELGVRTPFGEVRTTLRAPAVILGLVNLEDTDV CCCEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCC DPSYVTVLWNDRVAFLTTYSVVFARLESDGRIELERQAWFDKYRDVLPVYRPRADYCEYR CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHEE FDTRDGTVEVKFYDLWGRTLVTVRANLGDENATFDETTADPETLEEIESKLAHLPERLRE ECCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YWSFLLVRTPEGVEPVAITIDPLELAPDSHLAEFLRTLNLADRLQLSSPLSLAPALLALT HHHEEEEECCCCCCCEEEEEECHHCCCCHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHH ARLYAAVGLSVEIRWGRDDVFERLYDEVWSALPVAACWNLLYPLVSNAILKSIVERLRSF HHHHHHHCCEEEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GLPAIVPCCVSVAVWEWVTENAVFPVLERWYWGYTVSMGMAPVVEEPFKRLVAVEFGIPR CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCHH IVSGAVYGLLEGLWHWVSGIETGPLLSILLDKAATHALLTVLPLPLAMELHSRTFGIIGG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEECC TTAFQDSIHLLNGIITGVLTGDVPTILDLLYYTALSVILENTFGIPVTPGL CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRSSGVLITHLLLFSLTLPIPAHSTPVLHGDTATDCLEALTRLSHEARHLDSYHLVLIGS CCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC PPYRYLTVLPNAGLVTDDPSTNASLHGRELGVRTPFGEVRTTLRAPAVILGLVNLEDTDV CCCEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCC DPSYVTVLWNDRVAFLTTYSVVFARLESDGRIELERQAWFDKYRDVLPVYRPRADYCEYR CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHEE FDTRDGTVEVKFYDLWGRTLVTVRANLGDENATFDETTADPETLEEIESKLAHLPERLRE ECCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YWSFLLVRTPEGVEPVAITIDPLELAPDSHLAEFLRTLNLADRLQLSSPLSLAPALLALT HHHEEEEECCCCCCCEEEEEECHHCCCCHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHH ARLYAAVGLSVEIRWGRDDVFERLYDEVWSALPVAACWNLLYPLVSNAILKSIVERLRSF HHHHHHHCCEEEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GLPAIVPCCVSVAVWEWVTENAVFPVLERWYWGYTVSMGMAPVVEEPFKRLVAVEFGIPR CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCHH IVSGAVYGLLEGLWHWVSGIETGPLLSILLDKAATHALLTVLPLPLAMELHSRTFGIIGG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEECC TTAFQDSIHLLNGIITGVLTGDVPTILDLLYYTALSVILENTFGIPVTPGL CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA