| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094714
Identifier: 20094714
GI number: 20094714
Start: 1275808
End: 1277502
Strand: Reverse
Name: 20094714
Synonym: MK1278
Alternate gene names: NA
Gene position: 1277502-1275808 (Counterclockwise)
Preceding gene: 20094717
Following gene: 20094712
Centisome position: 75.37
GC content: 70.44
Gene sequence:
>1695_bases GTGCGGTTGCACGTCCTCCTGACCCTCGGGGACGTGTCGAACTACCGGAAACCGAAGGAACCCTGGCTGGTCGAGGTGTC GCTGCTCGAGCGGCTGACCGGCGAATCGCCCGAGGACACCCTGGAGTGGACCGTGGAGGGTCGGAAGGTCGAGGTCGTGG AGACCTCGGACCGAGAGCTGGGTACCCTCGCGCTCCTCGAGGCCCTGCACGACGGGTTCGACGTCGAGCCCGGCGAGGCC GTGGTCGTGTCCACGGGGATCATCGAGGAGGATGAGAAGCGCGAGAAGTACGAAGAGAAGGTCCGAGAGCCGCTCGAGGA CCTCGAGTACGGGGTCGAAGAGCACACGGACGCGCGGTTGACCGAACCGGAAGGCCTGGTCGACCGAGTGTGCGAGGTGA CGCTGGAACTCCTGAGGACGGGCGACGCGGTCCTCTTCGACCTGACGCACGGCGCCCGCGTGATGCCGTTCGCCTCGGCC CTGGGCCTGGTACCCGCCCTCCGGGCGCTGACCTTCCGCCGGGCGGTGCTCGGGGACGACGAGGGGAGCCTCTGGGAGCG TGTGGCGTTCTCGTACTGCATCTCGGGGAAGGAGGTCGAGGGCGTCGTGGAGGGGGACCGGTGGCTCGTGGCGGACGTGA CCGACCACGTGCTGGCCTGGAGGATCCGCGACACGGTGGCGACGTACCTGGCGGACCCGTCCCCCAGGTGGGTCGACGAG GCCGAGGAGGCGCTCCGGACGATACGCTCGGAGCCCGTGGAGTGGGTCGAGACGCTCCGGGAGTTCGCCCGGGTGGAGCG GGCGTCGTCCCCCGGTCCGGTCCACGAGTTCGTGCGCGAGGAGGACGTCCCCGACCGGGATTCCCTGGTGGAACTCGTCT GGGGGACGCTCCGGCGGGTGTTCTTGGGGGACGTGGAACCTCGTGAGCCCGCCCGCCGGACGGTCTCGGAGGGACCGCTG ACGCCGGAGGAGCGCCGCGAGCTGGCGGCTCGGCTGTCCGAGGTGCGGGACTTCCTGCGGGATTACTGCCGATACATGCT GGACCGGGGTAGAGTGGCGGAGGCCGCGAGCCTGATGAACGAGACGCACCTGCTGCTGCGGGCCTTCGCGAAGCTCGTCG AGCCGTTCCTGAACGAGGGCGCTTACAAGCGGGCGCGCCTGAAGCGCTCGGACGGGGAGTTAAGGCGGCTGAAGGAGCTG GCCGCCGCGACCCTGGACGAGCTGTACTTCAAGCTCTTCGACCCGTTCGGGGGGCTCCCGGCCGCTCGGGGCGCCATACG TCGCATCCTCGGGGAGCTCGGCGAGGACGTGGGGGAGTCGACCGAGACCGTGTGGGAGAGCTGGAGCCGGAGCGGGGAGC TCCTGAGGTCCCTGGTGGGCGGGGGACTACCCCTCAAGCGGGACCTCGAGGAGCGCCTCGGGGACGCGTTCCGGGACGAC CCGAGGCTCCGCGAGCTCGCGGAGCTCTCCGGGACCGACGACCCGACCGAGCTCGCGCTGGAGAAGCCGCCGATCCGTCG CATCAGGAACAAGCTGCAGCACGGGGACCCGGTCTCGGACCGCAGGGAGGTCCACCGGAGGCTCGTGGAGCTGTGCCGGG CACATCTCGAGGGGCTGACCCTGCCCCTGATAGAGCTCCTGACGGAGACCGTCGAGGGACGCACCCGCGGGGACGGTCCG GCGCGTGGCTCGTAG
Upstream 100 bases:
>100_bases CGCGGAAACGTTTCAGAATCCTTCCAATACTCTCAGGTTTCCCGGAGAGGTCCGACGGCGGTTTAACGTTCCGTGAATCG TCTGACCGGGGCCGCGCCCG
Downstream 100 bases:
>100_bases TACCCCTCGTGCCGGTTCCTCGCGCCCTACTTCGCTTTGAAGGGATAATCGATCCGAACTACCCGTGGAGACCTCCGGCA GGCCGGCGGTGCACCTAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MRLHVLLTLGDVSNYRKPKEPWLVEVSLLERLTGESPEDTLEWTVEGRKVEVVETSDRELGTLALLEALHDGFDVEPGEA VVVSTGIIEEDEKREKYEEKVREPLEDLEYGVEEHTDARLTEPEGLVDRVCEVTLELLRTGDAVLFDLTHGARVMPFASA LGLVPALRALTFRRAVLGDDEGSLWERVAFSYCISGKEVEGVVEGDRWLVADVTDHVLAWRIRDTVATYLADPSPRWVDE AEEALRTIRSEPVEWVETLREFARVERASSPGPVHEFVREEDVPDRDSLVELVWGTLRRVFLGDVEPREPARRTVSEGPL TPEERRELAARLSEVRDFLRDYCRYMLDRGRVAEAASLMNETHLLLRAFAKLVEPFLNEGAYKRARLKRSDGELRRLKEL AAATLDELYFKLFDPFGGLPAARGAIRRILGELGEDVGESTETVWESWSRSGELLRSLVGGGLPLKRDLEERLGDAFRDD PRLRELAELSGTDDPTELALEKPPIRRIRNKLQHGDPVSDRREVHRRLVELCRAHLEGLTLPLIELLTETVEGRTRGDGP ARGS
Sequences:
>Translated_564_residues MRLHVLLTLGDVSNYRKPKEPWLVEVSLLERLTGESPEDTLEWTVEGRKVEVVETSDRELGTLALLEALHDGFDVEPGEA VVVSTGIIEEDEKREKYEEKVREPLEDLEYGVEEHTDARLTEPEGLVDRVCEVTLELLRTGDAVLFDLTHGARVMPFASA LGLVPALRALTFRRAVLGDDEGSLWERVAFSYCISGKEVEGVVEGDRWLVADVTDHVLAWRIRDTVATYLADPSPRWVDE AEEALRTIRSEPVEWVETLREFARVERASSPGPVHEFVREEDVPDRDSLVELVWGTLRRVFLGDVEPREPARRTVSEGPL TPEERRELAARLSEVRDFLRDYCRYMLDRGRVAEAASLMNETHLLLRAFAKLVEPFLNEGAYKRARLKRSDGELRRLKEL AAATLDELYFKLFDPFGGLPAARGAIRRILGELGEDVGESTETVWESWSRSGELLRSLVGGGLPLKRDLEERLGDAFRDD PRLRELAELSGTDDPTELALEKPPIRRIRNKLQHGDPVSDRREVHRRLVELCRAHLEGLTLPLIELLTETVEGRTRGDGP ARGS >Mature_564_residues MRLHVLLTLGDVSNYRKPKEPWLVEVSLLERLTGESPEDTLEWTVEGRKVEVVETSDRELGTLALLEALHDGFDVEPGEA VVVSTGIIEEDEKREKYEEKVREPLEDLEYGVEEHTDARLTEPEGLVDRVCEVTLELLRTGDAVLFDLTHGARVMPFASA LGLVPALRALTFRRAVLGDDEGSLWERVAFSYCISGKEVEGVVEGDRWLVADVTDHVLAWRIRDTVATYLADPSPRWVDE AEEALRTIRSEPVEWVETLREFARVERASSPGPVHEFVREEDVPDRDSLVELVWGTLRRVFLGDVEPREPARRTVSEGPL TPEERRELAARLSEVRDFLRDYCRYMLDRGRVAEAASLMNETHLLLRAFAKLVEPFLNEGAYKRARLKRSDGELRRLKEL AAATLDELYFKLFDPFGGLPAARGAIRRILGELGEDVGESTETVWESWSRSGELLRSLVGGGLPLKRDLEERLGDAFRDD PRLRELAELSGTDDPTELALEKPPIRRIRNKLQHGDPVSDRREVHRRLVELCRAHLEGLTLPLIELLTETVEGRTRGDGP ARGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63877; Mature: 63877
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLHVLLTLGDVSNYRKPKEPWLVEVSLLERLTGESPEDTLEWTVEGRKVEVVETSDREL CEEEEEEEECCCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCHH GTLALLEALHDGFDVEPGEAVVVSTGIIEEDEKREKYEEKVREPLEDLEYGVEEHTDARL HHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCC TEPEGLVDRVCEVTLELLRTGDAVLFDLTHGARVMPFASALGLVPALRALTFRRAVLGDD CCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC EGSLWERVAFSYCISGKEVEGVVEGDRWLVADVTDHVLAWRIRDTVATYLADPSPRWVDE CHHHHHHHHHHHHHCCCCCCCEECCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AEEALRTIRSEPVEWVETLREFARVERASSPGPVHEFVREEDVPDRDSLVELVWGTLRRV HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH FLGDVEPREPARRTVSEGPLTPEERRELAARLSEVRDFLRDYCRYMLDRGRVAEAASLMN HHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH ETHLLLRAFAKLVEPFLNEGAYKRARLKRSDGELRRLKELAAATLDELYFKLFDPFGGLP HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH AARGAIRRILGELGEDVGESTETVWESWSRSGELLRSLVGGGLPLKRDLEERLGDAFRDD HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC PRLRELAELSGTDDPTELALEKPPIRRIRNKLQHGDPVSDRREVHRRLVELCRAHLEGLT HHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCH LPLIELLTETVEGRTRGDGPARGS HHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRLHVLLTLGDVSNYRKPKEPWLVEVSLLERLTGESPEDTLEWTVEGRKVEVVETSDREL CEEEEEEEECCCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCHH GTLALLEALHDGFDVEPGEAVVVSTGIIEEDEKREKYEEKVREPLEDLEYGVEEHTDARL HHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCC TEPEGLVDRVCEVTLELLRTGDAVLFDLTHGARVMPFASALGLVPALRALTFRRAVLGDD CCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC EGSLWERVAFSYCISGKEVEGVVEGDRWLVADVTDHVLAWRIRDTVATYLADPSPRWVDE CHHHHHHHHHHHHHCCCCCCCEECCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AEEALRTIRSEPVEWVETLREFARVERASSPGPVHEFVREEDVPDRDSLVELVWGTLRRV HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH FLGDVEPREPARRTVSEGPLTPEERRELAARLSEVRDFLRDYCRYMLDRGRVAEAASLMN HHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH ETHLLLRAFAKLVEPFLNEGAYKRARLKRSDGELRRLKELAAATLDELYFKLFDPFGGLP HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH AARGAIRRILGELGEDVGESTETVWESWSRSGELLRSLVGGGLPLKRDLEERLGDAFRDD HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC PRLRELAELSGTDDPTELALEKPPIRRIRNKLQHGDPVSDRREVHRRLVELCRAHLEGLT HHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCH LPLIELLTETVEGRTRGDGPARGS HHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA