| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094709
Identifier: 20094709
GI number: 20094709
Start: 1269348
End: 1270529
Strand: Reverse
Name: 20094709
Synonym: MK1273
Alternate gene names: NA
Gene position: 1270529-1269348 (Counterclockwise)
Preceding gene: 20094710
Following gene: 20094708
Centisome position: 74.96
GC content: 64.38
Gene sequence:
>1182_bases GTGGTACCGGCGGCCCGTCGGGCGATCCCGACGTTGGTGTCGTTGGCGTCTTTGGTCGTCGTCCTCACGGTCCCGGTGTC GGGGGAGGAGTACGCGCTTCGGGACCACGGGTCCGGACTCACCACTGTCTGGTTCTACGACCCGAACACGATGGGATCGC AGCTGCCCTCGAACTGGAAAGACTACCTGTGGGTGGGCAAGCCGACCAGCGTGGCCCTCGGGTTCGAGCTCACCGCGAAC AACTGCACCTCCTACTTCGACAGCCCGTTCGCCCACGATATCGTCGGCAGGCTTACGGCCCAGGGGTTCGACGTGACCTC CGTGGACTACGCCGAGGCGAACGGGCCCGTGTCGAGTCCCGACGACCTGTTGAACGCCACCAACCGGCGCGGTACACCGC TGACGCCCGCCGGACTATCCCTCAGGGTGACCGACGGGACGAGCACGTACTACTTGATACCGTGTTACGGTGGTCCCGAC CGCGTGCCGTACTACCTGGACGAGGACTCGTGGCCGGCCAAGGGCGAGCGGACGGTGATCTGGGTCCCGACGACCTCGGG TCCCGTGCCGTTCCTGCTTCGGGGTGCGGACGAGCCGAACGCGCTGTTGGTGGTCGAGCGTCCGGGGTCGGAGCGGCTCG ACCTAGACGGGGACGGGAACCCCGACGTCGACCTCTCCGGCCTAGCCTCGCTCAGTATGGTCTGGATGCTGGCCCTCACG ATCAGGACGGTCACCGGCGATTACCTGCTGGTTCAGGGGCCGGACCTGTACTACGAGGTGTCACCGGACGAACACCTACT GAACGTCGCGTCGTTCCGCGCGAGCGATGTGGAGTTCTCCGATGACGGCACCATGAAGCTGAAGCTACACATCGGGGTCG AGAAAGGTACCTCCGTGTCGCTGGAAGGTGTCGATCTGGCGTTCCTGGATCGGGACGGCACGGCATTGAACGTCACGCCT TCGGAGGGGGATCTGGAGAATGAGCTGTTGAACTCGTTGAAATCGGCGCTGTCATGGGATTCGAGCGAGATCACCCTCTC GCACCCGAGTGGCGACATCCGCGAGCACCTACCCGCGATCATCACCCTACGCGTGATGGGGAGCACGGAACTGACCGACA ACCTCGGCAACACCTCGCAGTTCACGGTTATGGCGTCAGGGAGGTGGACGTCCTACCACTGA
Upstream 100 bases:
>100_bases AGGCGTGGATCGGGAGGCGGGGCGGGAAGCTGGAGTTACCGTGAACTCATGCGATACGTTGATATACCGGAGAGCGAACG GGGGAATCGGGGTTCCGGCG
Downstream 100 bases:
>100_bases GTTTCGAGTGCCGGATATCACAGACCGAGTGGCGACAGAACGGGGACGAGGCAATCGTCCGCGGCACCGTGACCGTCGAT CACCTGACGCCTCCGGGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MVPAARRAIPTLVSLASLVVVLTVPVSGEEYALRDHGSGLTTVWFYDPNTMGSQLPSNWKDYLWVGKPTSVALGFELTAN NCTSYFDSPFAHDIVGRLTAQGFDVTSVDYAEANGPVSSPDDLLNATNRRGTPLTPAGLSLRVTDGTSTYYLIPCYGGPD RVPYYLDEDSWPAKGERTVIWVPTTSGPVPFLLRGADEPNALLVVERPGSERLDLDGDGNPDVDLSGLASLSMVWMLALT IRTVTGDYLLVQGPDLYYEVSPDEHLLNVASFRASDVEFSDDGTMKLKLHIGVEKGTSVSLEGVDLAFLDRDGTALNVTP SEGDLENELLNSLKSALSWDSSEITLSHPSGDIREHLPAIITLRVMGSTELTDNLGNTSQFTVMASGRWTSYH
Sequences:
>Translated_393_residues MVPAARRAIPTLVSLASLVVVLTVPVSGEEYALRDHGSGLTTVWFYDPNTMGSQLPSNWKDYLWVGKPTSVALGFELTAN NCTSYFDSPFAHDIVGRLTAQGFDVTSVDYAEANGPVSSPDDLLNATNRRGTPLTPAGLSLRVTDGTSTYYLIPCYGGPD RVPYYLDEDSWPAKGERTVIWVPTTSGPVPFLLRGADEPNALLVVERPGSERLDLDGDGNPDVDLSGLASLSMVWMLALT IRTVTGDYLLVQGPDLYYEVSPDEHLLNVASFRASDVEFSDDGTMKLKLHIGVEKGTSVSLEGVDLAFLDRDGTALNVTP SEGDLENELLNSLKSALSWDSSEITLSHPSGDIREHLPAIITLRVMGSTELTDNLGNTSQFTVMASGRWTSYH >Mature_393_residues MVPAARRAIPTLVSLASLVVVLTVPVSGEEYALRDHGSGLTTVWFYDPNTMGSQLPSNWKDYLWVGKPTSVALGFELTAN NCTSYFDSPFAHDIVGRLTAQGFDVTSVDYAEANGPVSSPDDLLNATNRRGTPLTPAGLSLRVTDGTSTYYLIPCYGGPD RVPYYLDEDSWPAKGERTVIWVPTTSGPVPFLLRGADEPNALLVVERPGSERLDLDGDGNPDVDLSGLASLSMVWMLALT IRTVTGDYLLVQGPDLYYEVSPDEHLLNVASFRASDVEFSDDGTMKLKLHIGVEKGTSVSLEGVDLAFLDRDGTALNVTP SEGDLENELLNSLKSALSWDSSEITLSHPSGDIREHLPAIITLRVMGSTELTDNLGNTSQFTVMASGRWTSYH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42537; Mature: 42537
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPAARRAIPTLVSLASLVVVLTVPVSGEEYALRDHGSGLTTVWFYDPNTMGSQLPSNWK CCCCHHHHHHHHHHHHHEEEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCC DYLWVGKPTSVALGFELTANNCTSYFDSPFAHDIVGRLTAQGFDVTSVDYAEANGPVSSP CEEEECCCCEEEEEEEEECCCCCHHCCCCHHHHHHHHHHCCCCCEEEECHHCCCCCCCCH DDLLNATNRRGTPLTPAGLSLRVTDGTSTYYLIPCYGGPDRVPYYLDEDSWPAKGERTVI HHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCEEECCCCCCCCCCEEEE WVPTTSGPVPFLLRGADEPNALLVVERPGSERLDLDGDGNPDVDLSGLASLSMVWMLALT EEECCCCCCCEEEECCCCCCEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHH IRTVTGDYLLVQGPDLYYEVSPDEHLLNVASFRASDVEFSDDGTMKLKLHIGVEKGTSVS HHEECCCEEEEECCCEEEEECCCHHHHHHHHCCCCCCEECCCCEEEEEEEEEECCCCEEE LEGVDLAFLDRDGTALNVTPSEGDLENELLNSLKSALSWDSSEITLSHPSGDIREHLPAI ECCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCEE ITLRVMGSTELTDNLGNTSQFTVMASGRWTSYH EEEEEECCCHHHHCCCCCEEEEEEECCCEECCC >Mature Secondary Structure MVPAARRAIPTLVSLASLVVVLTVPVSGEEYALRDHGSGLTTVWFYDPNTMGSQLPSNWK CCCCHHHHHHHHHHHHHEEEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCC DYLWVGKPTSVALGFELTANNCTSYFDSPFAHDIVGRLTAQGFDVTSVDYAEANGPVSSP CEEEECCCCEEEEEEEEECCCCCHHCCCCHHHHHHHHHHCCCCCEEEECHHCCCCCCCCH DDLLNATNRRGTPLTPAGLSLRVTDGTSTYYLIPCYGGPDRVPYYLDEDSWPAKGERTVI HHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCEEECCCCCCCCCCEEEE WVPTTSGPVPFLLRGADEPNALLVVERPGSERLDLDGDGNPDVDLSGLASLSMVWMLALT EEECCCCCCCEEEECCCCCCEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHH IRTVTGDYLLVQGPDLYYEVSPDEHLLNVASFRASDVEFSDDGTMKLKLHIGVEKGTSVS HHEECCCEEEEECCCEEEEECCCHHHHHHHHCCCCCCEECCCCEEEEEEEEEECCCCEEE LEGVDLAFLDRDGTALNVTPSEGDLENELLNSLKSALSWDSSEITLSHPSGDIREHLPAI ECCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCEE ITLRVMGSTELTDNLGNTSQFTVMASGRWTSYH EEEEEECCCHHHHCCCCCEEEEEEECCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA