| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094567
Identifier: 20094567
GI number: 20094567
Start: 1107532
End: 1108419
Strand: Reverse
Name: 20094567
Synonym: MK1131
Alternate gene names: NA
Gene position: 1108419-1107532 (Counterclockwise)
Preceding gene: 20094569
Following gene: 20094564
Centisome position: 65.39
GC content: 68.92
Gene sequence:
>888_bases GTGTCCGACGCCCACGAGCTGGCGCTCAGGAGAAGGTTGAAGGTGGATCTGAGCCTGCTGAAGAGGTTGGGACTCGAGGG GTCGGTCGTGAGGAACGTCAGGCATCCCCTGGGCCTGCTGGTGAAGCTCGCGGAGGAGGAGCTCGTGGAGCCGGGCCGCG TCCACGCTCACCTCCCGCTCTACACCCCTCCGATCTCGACCGTGCTCAGGCTACTGGAGGCCTCCGAGGAGGTCGGGTAC GAGGTGACCGCGTCGGTGGAGGTGATCGCGGAGGACGACGGTCGGGTGGAGGAAGTTCGCGAGGTAGTGGACCGTGTCGA ACCCGTGATCCTGGGCCTCCCGGGCGTGCTGACGCTCTCGGACCGCGTCTTCGAGCTCGCGTCGGAGAGGGCACCCCTGT TCCTGGACCTGGGATGGGCGCTGCACCCGCATCGGGCCGTTCCCTCGGTCGACCTGACCACGGTCCCGACGTTGGCGGCC CTGAGGGCGGTGGAGAGCGTCTCGGGCGAGGACGCGTTCGAGCGCGTGGTGGCGGTCGCGAGGCTGGGTCACGGTCTAAC CGTGGACCGTGGGAAGGTGAGGGGATCGGGGGGCGGGGGTCTCAAGCTCGTGGACGTCACGGACGTCCTACGCGCGCTCT CGGTCGTGCTCGACCTGGCGCGGTACCCGGTGGCCCCCGCCCTGGGGCCCACGGTGAGGAGGGAGTTGGAGAGGCTCCTG GACGGTTTCGACGGACCGGAGCGGGAGGACCTCACCGAGGCGGCGCGGGCCTTCGAGCTCCTCTCCAACCTCACCCCGGG ACAGACCGAGGAGGACGTCAAGATACCGGAACACCCGAGCATAATCCGAGAGGTGCTCGAGGACAGGCTCCGGGACCTCG TCGAGTGA
Upstream 100 bases:
>100_bases GGAGACTGGGAGACTACGAGCCCTTCTCGCCCCCACCGGACGTCCGTGATGTGATGCCAAGGGGGTAACCGGGCTGGAGC TCAACGCCTTTCTCCGCCTG
Downstream 100 bases:
>100_bases CCGCCGGTGATCGACGAGCATCGCCGCCCTGGAAGAGGCCTCCTGGATCGTCCTCGGACCGGGTCGTAACGCCTTCATCC GATGCTTTTCTAGGACGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSDAHELALRRRLKVDLSLLKRLGLEGSVVRNVRHPLGLLVKLAEEELVEPGRVHAHLPLYTPPISTVLRLLEASEEVGY EVTASVEVIAEDDGRVEEVREVVDRVEPVILGLPGVLTLSDRVFELASERAPLFLDLGWALHPHRAVPSVDLTTVPTLAA LRAVESVSGEDAFERVVAVARLGHGLTVDRGKVRGSGGGGLKLVDVTDVLRALSVVLDLARYPVAPALGPTVRRELERLL DGFDGPEREDLTEAARAFELLSNLTPGQTEEDVKIPEHPSIIREVLEDRLRDLVE
Sequences:
>Translated_295_residues MSDAHELALRRRLKVDLSLLKRLGLEGSVVRNVRHPLGLLVKLAEEELVEPGRVHAHLPLYTPPISTVLRLLEASEEVGY EVTASVEVIAEDDGRVEEVREVVDRVEPVILGLPGVLTLSDRVFELASERAPLFLDLGWALHPHRAVPSVDLTTVPTLAA LRAVESVSGEDAFERVVAVARLGHGLTVDRGKVRGSGGGGLKLVDVTDVLRALSVVLDLARYPVAPALGPTVRRELERLL DGFDGPEREDLTEAARAFELLSNLTPGQTEEDVKIPEHPSIIREVLEDRLRDLVE >Mature_294_residues SDAHELALRRRLKVDLSLLKRLGLEGSVVRNVRHPLGLLVKLAEEELVEPGRVHAHLPLYTPPISTVLRLLEASEEVGYE VTASVEVIAEDDGRVEEVREVVDRVEPVILGLPGVLTLSDRVFELASERAPLFLDLGWALHPHRAVPSVDLTTVPTLAAL RAVESVSGEDAFERVVAVARLGHGLTVDRGKVRGSGGGGLKLVDVTDVLRALSVVLDLARYPVAPALGPTVRRELERLLD GFDGPEREDLTEAARAFELLSNLTPGQTEEDVKIPEHPSIIREVLEDRLRDLVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32279; Mature: 32148
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAHELALRRRLKVDLSLLKRLGLEGSVVRNVRHPLGLLVKLAEEELVEPGRVHAHLPL CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC YTPPISTVLRLLEASEEVGYEVTASVEVIAEDDGRVEEVREVVDRVEPVILGLPGVLTLS CCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHH DRVFELASERAPLFLDLGWALHPHRAVPSVDLTTVPTLAALRAVESVSGEDAFERVVAVA HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH RLGHGLTVDRGKVRGSGGGGLKLVDVTDVLRALSVVLDLARYPVAPALGPTVRRELERLL HHCCCCEECCCCEECCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH DGFDGPEREDLTEAARAFELLSNLTPGQTEEDVKIPEHPSIIREVLEDRLRDLVE HCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDAHELALRRRLKVDLSLLKRLGLEGSVVRNVRHPLGLLVKLAEEELVEPGRVHAHLPL CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC YTPPISTVLRLLEASEEVGYEVTASVEVIAEDDGRVEEVREVVDRVEPVILGLPGVLTLS CCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHH DRVFELASERAPLFLDLGWALHPHRAVPSVDLTTVPTLAALRAVESVSGEDAFERVVAVA HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH RLGHGLTVDRGKVRGSGGGGLKLVDVTDVLRALSVVLDLARYPVAPALGPTVRRELERLL HHCCCCEECCCCEECCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH DGFDGPEREDLTEAARAFELLSNLTPGQTEEDVKIPEHPSIIREVLEDRLRDLVE HCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA