| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094532
Identifier: 20094532
GI number: 20094532
Start: 1066239
End: 1067360
Strand: Reverse
Name: 20094532
Synonym: MK1096
Alternate gene names: NA
Gene position: 1067360-1066239 (Counterclockwise)
Preceding gene: 20094533
Following gene: 20094531
Centisome position: 62.97
GC content: 59.8
Gene sequence:
>1122_bases TTGAAGTGGTGGGAGGTCCCGGTCCGTCCGAAACCGTCGGTGCTGGAGAAGTTACACGCCGCGGTATCGGAACCTTGTGA GGTGCTCGAGAACTTCGAACTCTTTCGGCGCGCGATGATTTCGACGCTTGACCCGGATAAACCGCTCGTCCGCGCACTTC GAGGGGAGGAGATCCATCACGTTCATCCGGTTCGGTTCCTTTTGGAAGAGGTTTTGGATGATCCTGCTACACTGGTCGAT GCCGTGGAGCGAATCACCCGATGGTCGTTGAGCGGTGTGTTCGAGCTTCGCGTGGCCCTCGAAGAAGTTACCGAAACACC AGACGTCGCACTCGGGTACCTACTGGAGATACGTCGTGCCTTCCTATCGGCGGTACCCAAGTACCTCGAAGAACCCTGCC TAGAGACCGTAGCGGGTCCGTTGCTGGTAGAAGTCGCGCTCATGGCGTGTACGGAAGGGTTCTTAGAGGACGAGGACCTC GGGAAGGCCGCCGAGCTCGTGGCCAAGGCGGTAGACACGGACCAGTGCATCGTCGAGGCGCTCCCGTCGCTGGAGATTCA ATACGGAGACATCGTCCCGAAGTTCGCATCACCGGCCCGGGTTTGGACGATCTTCACACTCCTCTGTCATACGTGCGCGA ACAGGCTTCCCCCACTCGAAGAGCTGGCCGAGCCTCTGGAGAACGTCGAGCTCGGTCCCGTGGAGGAACTGGAGCTCCTC AACGGATACCTGGAGGAGGCCATCGCAGCTCTGGAAATCGAGGACGAGCGGGTGGAAAGATGGATATCGGACATACTCGT GGACACCGTGGAGAGGGCCGCGGAGCTGATACAGCTTCTGTCACAGCCGACGGAGCTCGCGGAGAACATCCTGAACTCGG GAGCGACGGTGAGGGTAGGATGGATCGAGATAGAGCCGAAGGAGTACGACCCCCTGTGGGAAGAGAAGGGCGCCCAGGAG AGCTTGTACTCGAGGATCAAGAGGATTCAGAACCTCATCGGAGTGGAACACGCGGACGAGGTCATCGAGCGGGCCTCGGC GTTGGGTGGTGTGGAACTCCCGGTCGGTGGAGGGGTGGAAGTAGAGTCATCGGTTGAGACACTCCGGCGGATGATTGGCT GA
Upstream 100 bases:
>100_bases ATAATATCTCTATATCTCTCTTAAGACTGCGACCACCTGACTGAACATTCCTGCAAACTTAACATTGTAATACGTCGACC GGAGTACCGGGGAGTGTCGG
Downstream 100 bases:
>100_bases TGTACGGCCGTCTCACCGACGGTACGGCCGCCCGGACGGCTCACGCCGCCTAAACCTTTCGTGTGAATCGGCCCGGCTCC CGTGCGCCGCGCCCGCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MKWWEVPVRPKPSVLEKLHAAVSEPCEVLENFELFRRAMISTLDPDKPLVRALRGEEIHHVHPVRFLLEEVLDDPATLVD AVERITRWSLSGVFELRVALEEVTETPDVALGYLLEIRRAFLSAVPKYLEEPCLETVAGPLLVEVALMACTEGFLEDEDL GKAAELVAKAVDTDQCIVEALPSLEIQYGDIVPKFASPARVWTIFTLLCHTCANRLPPLEELAEPLENVELGPVEELELL NGYLEEAIAALEIEDERVERWISDILVDTVERAAELIQLLSQPTELAENILNSGATVRVGWIEIEPKEYDPLWEEKGAQE SLYSRIKRIQNLIGVEHADEVIERASALGGVELPVGGGVEVESSVETLRRMIG
Sequences:
>Translated_373_residues MKWWEVPVRPKPSVLEKLHAAVSEPCEVLENFELFRRAMISTLDPDKPLVRALRGEEIHHVHPVRFLLEEVLDDPATLVD AVERITRWSLSGVFELRVALEEVTETPDVALGYLLEIRRAFLSAVPKYLEEPCLETVAGPLLVEVALMACTEGFLEDEDL GKAAELVAKAVDTDQCIVEALPSLEIQYGDIVPKFASPARVWTIFTLLCHTCANRLPPLEELAEPLENVELGPVEELELL NGYLEEAIAALEIEDERVERWISDILVDTVERAAELIQLLSQPTELAENILNSGATVRVGWIEIEPKEYDPLWEEKGAQE SLYSRIKRIQNLIGVEHADEVIERASALGGVELPVGGGVEVESSVETLRRMIG >Mature_373_residues MKWWEVPVRPKPSVLEKLHAAVSEPCEVLENFELFRRAMISTLDPDKPLVRALRGEEIHHVHPVRFLLEEVLDDPATLVD AVERITRWSLSGVFELRVALEEVTETPDVALGYLLEIRRAFLSAVPKYLEEPCLETVAGPLLVEVALMACTEGFLEDEDL GKAAELVAKAVDTDQCIVEALPSLEIQYGDIVPKFASPARVWTIFTLLCHTCANRLPPLEELAEPLENVELGPVEELELL NGYLEEAIAALEIEDERVERWISDILVDTVERAAELIQLLSQPTELAENILNSGATVRVGWIEIEPKEYDPLWEEKGAQE SLYSRIKRIQNLIGVEHADEVIERASALGGVELPVGGGVEVESSVETLRRMIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41660; Mature: 41660
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWWEVPVRPKPSVLEKLHAAVSEPCEVLENFELFRRAMISTLDPDKPLVRALRGEEIHH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHH VHPVRFLLEEVLDDPATLVDAVERITRWSLSGVFELRVALEEVTETPDVALGYLLEIRRA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FLSAVPKYLEEPCLETVAGPLLVEVALMACTEGFLEDEDLGKAAELVAKAVDTDQCIVEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHCHHHHHHHH LPSLEIQYGDIVPKFASPARVWTIFTLLCHTCANRLPPLEELAEPLENVELGPVEELELL CCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHH NGYLEEAIAALEIEDERVERWISDILVDTVERAAELIQLLSQPTELAENILNSGATVRVG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEE WIEIEPKEYDPLWEEKGAQESLYSRIKRIQNLIGVEHADEVIERASALGGVELPVGGGVE EEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCC VESSVETLRRMIG HHHHHHHHHHHHC >Mature Secondary Structure MKWWEVPVRPKPSVLEKLHAAVSEPCEVLENFELFRRAMISTLDPDKPLVRALRGEEIHH CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHH VHPVRFLLEEVLDDPATLVDAVERITRWSLSGVFELRVALEEVTETPDVALGYLLEIRRA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FLSAVPKYLEEPCLETVAGPLLVEVALMACTEGFLEDEDLGKAAELVAKAVDTDQCIVEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHCHHHHHHHH LPSLEIQYGDIVPKFASPARVWTIFTLLCHTCANRLPPLEELAEPLENVELGPVEELELL CCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHH NGYLEEAIAALEIEDERVERWISDILVDTVERAAELIQLLSQPTELAENILNSGATVRVG HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEE WIEIEPKEYDPLWEEKGAQESLYSRIKRIQNLIGVEHADEVIERASALGGVELPVGGGVE EEEECCCCCCCCHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCC VESSVETLRRMIG HHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA