| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094531
Identifier: 20094531
GI number: 20094531
Start: 1064771
End: 1065691
Strand: Reverse
Name: 20094531
Synonym: MK1095
Alternate gene names: NA
Gene position: 1065691-1064771 (Counterclockwise)
Preceding gene: 20094532
Following gene: 20094530
Centisome position: 62.87
GC content: 63.3
Gene sequence:
>921_bases ATGGAGTTCAGCTACGCCGCGATGGTGGCGGTTTTAGCCGCAGCCCGAGGTTTCGCGCCGGTCTTCGTCGAGCACCTACC TTGTGAGAGCTGCCGCGGGAAGAACTGCGAAATCATCCGCTCCAGTCGCTGCCTGATGGTGGCTACCACTGAGTTGCTCT GTGACGTTAACGTGGGTGCCCACGTGTTTTTCTCCGACGACCTGCTGGTCTACCGGGGCGTGGGCGACCCGGAGTCCGGG ATATCGATCCACGACGTCCACGACGCGGGTCCGGACGCCGCCCGTCGCATCTTGGACCGAGCCGGGGACGCTTTGAACCG TGGGCTGATGTTCATAGCCACGTGGGACGCGCGTCACGGTCCGCCCGAGGAGTTCGAGAGGCACGCACCCGAGGCGCTCA ACCTAGACGTGACGGGACTGACCCTCCCAATCCCGAGAATCGACACAGGACTTCACCCGACCGATTTCCGAGTCGTGAGC GCCGCCGAGGTACGTCCGGAGGACGTCGCGGACTTCTCCGATCTGGACTTGATCGTGGACGGTCGGAGGTACGTGGTCGA TCCGGTGCTCACCGCCGTAGCGGAGGTGCTCGGTGAGAGAGCCGTAGAGGGGTTAGGAGCCATTAGACTGGAGGCACCCC AGGGGGAAACACTGGAGTGGTGGATGGACTCCGTGAAGCGGTACTGGAAGCAGCTTCGGGTACGCAGCGCGCTGCGCAAC GGACCATCGGAGCTCGCGGCGGCCTTCTGGATCTCGATACTCGAAGTCGGGACACGGCTGGCTTCGGACGGCTGGAGTGT AGACCGCGATACCGTAGAAGACGCCATGAGGAAGTCCGCGCGGATGACGGAAGCTCTCGTACCGAAGGCGATCAGATCGC TGCTTTTAGGCCAACTCGCCGTCCTCGTCGAGGGGTTGTGA
Upstream 100 bases:
>100_bases CGCACGGGGACCGTGCTACCGAACGCTCGGACAAATCTACCCAAGCCACGGTCAGTCGAAGCCCCGGCTCGCACCGTGCG GTCAGGGGAGGATGCCGCAT
Downstream 100 bases:
>100_bases TGGGCCACATCCACGGCACGTACTGAATTCTCTCGCACGTACCTCGCCCGCCGTGCCTACCATGGCCTCGGAAGCTACGC GGACGAGTGTTCAGTACTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MEFSYAAMVAVLAAARGFAPVFVEHLPCESCRGKNCEIIRSSRCLMVATTELLCDVNVGAHVFFSDDLLVYRGVGDPESG ISIHDVHDAGPDAARRILDRAGDALNRGLMFIATWDARHGPPEEFERHAPEALNLDVTGLTLPIPRIDTGLHPTDFRVVS AAEVRPEDVADFSDLDLIVDGRRYVVDPVLTAVAEVLGERAVEGLGAIRLEAPQGETLEWWMDSVKRYWKQLRVRSALRN GPSELAAAFWISILEVGTRLASDGWSVDRDTVEDAMRKSARMTEALVPKAIRSLLLGQLAVLVEGL
Sequences:
>Translated_306_residues MEFSYAAMVAVLAAARGFAPVFVEHLPCESCRGKNCEIIRSSRCLMVATTELLCDVNVGAHVFFSDDLLVYRGVGDPESG ISIHDVHDAGPDAARRILDRAGDALNRGLMFIATWDARHGPPEEFERHAPEALNLDVTGLTLPIPRIDTGLHPTDFRVVS AAEVRPEDVADFSDLDLIVDGRRYVVDPVLTAVAEVLGERAVEGLGAIRLEAPQGETLEWWMDSVKRYWKQLRVRSALRN GPSELAAAFWISILEVGTRLASDGWSVDRDTVEDAMRKSARMTEALVPKAIRSLLLGQLAVLVEGL >Mature_306_residues MEFSYAAMVAVLAAARGFAPVFVEHLPCESCRGKNCEIIRSSRCLMVATTELLCDVNVGAHVFFSDDLLVYRGVGDPESG ISIHDVHDAGPDAARRILDRAGDALNRGLMFIATWDARHGPPEEFERHAPEALNLDVTGLTLPIPRIDTGLHPTDFRVVS AAEVRPEDVADFSDLDLIVDGRRYVVDPVLTAVAEVLGERAVEGLGAIRLEAPQGETLEWWMDSVKRYWKQLRVRSALRN GPSELAAAFWISILEVGTRLASDGWSVDRDTVEDAMRKSARMTEALVPKAIRSLLLGQLAVLVEGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33555; Mature: 33555
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFSYAAMVAVLAAARGFAPVFVEHLPCESCRGKNCEIIRSSRCLMVATTELLCDVNVGA CCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHCCCCCEEEECCCEEEEEEHHHHEECCCCE HVFFSDDLLVYRGVGDPESGISIHDVHDAGPDAARRILDRAGDALNRGLMFIATWDARHG EEEEECCEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHCHHHHCCEEEEEEECCCCC PPEEFERHAPEALNLDVTGLTLPIPRIDTGLHPTDFRVVSAAEVRPEDVADFSDLDLIVD CHHHHHHCCCCEECEEECCEEEECCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCEEEEC GRRYVVDPVLTAVAEVLGERAVEGLGAIRLEAPQGETLEWWMDSVKRYWKQLRVRSALRN CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHC GPSELAAAFWISILEVGTRLASDGWSVDRDTVEDAMRKSARMTEALVPKAIRSLLLGQLA CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVEGL HHHCCC >Mature Secondary Structure MEFSYAAMVAVLAAARGFAPVFVEHLPCESCRGKNCEIIRSSRCLMVATTELLCDVNVGA CCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHCCCCCEEEECCCEEEEEEHHHHEECCCCE HVFFSDDLLVYRGVGDPESGISIHDVHDAGPDAARRILDRAGDALNRGLMFIATWDARHG EEEEECCEEEEECCCCCCCCCEEEECCCCCHHHHHHHHHHHCHHHHCCEEEEEEECCCCC PPEEFERHAPEALNLDVTGLTLPIPRIDTGLHPTDFRVVSAAEVRPEDVADFSDLDLIVD CHHHHHHCCCCEECEEECCEEEECCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCEEEEC GRRYVVDPVLTAVAEVLGERAVEGLGAIRLEAPQGETLEWWMDSVKRYWKQLRVRSALRN CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHC GPSELAAAFWISILEVGTRLASDGWSVDRDTVEDAMRKSARMTEALVPKAIRSLLLGQLA CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVEGL HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA