Click here to switch to the map view.

The map label for this gene is 20094486

Identifier: 20094486

GI number: 20094486

Start: 1017228

End: 1018340

Strand: Direct

Name: 20094486

Synonym: MK1050

Alternate gene names: NA

Gene position: 1017228-1018340 (Clockwise)

Preceding gene: 20094485

Following gene: 20094487

Centisome position: 60.01

GC content: 66.49

Gene sequence:

>1113_bases
GTGAAGGACGGTGTGCTGACTGCCGAGGCGGGACTCGTCGGCAGGGACCTGGAGTTACTGTCCCCGATAACGATCGAGAT
CGAGGACGGTAGGGTACGACGGATCGAGGAGGGACGTGAACCCGGTGCGGACGACGACTTCGACGTCGTTCTGCCCGCAC
CGTTCAACGCACACGTCCACGCCGCTGACTGGGCGTTCCGACACGCCGGCCTCGGAATGCCGCTCGAGAAGGTCGTCGCC
CCGCCCGACGGCCTGAAACACCGGCTGCTCGAGAAGGTCGGGGAGCGGGAGCTCGAGGTCTCGATCCGGGACTTCCTCGA
GACCTCGCTGAGCTTCGGATGTCCTGGAGTCGCCGATTTCCGGGAGGGTGGCGTCGAGGGTCTGAAGCTGGGCCTCAGGG
CAGCCGAAGGCTTCCCGACCTACGTCCCGATGGGCCGGCCGAAGGCGCTCGACGACCCCGAGAGGGTCGAGGAGGAACTC
CGGGTCCTGTCGGAGCTGACGGAGTTCGTCGGGATCCCCGACGTACACCTGCCGGACGACGTGTTGGAGGCCGTGAGGGA
TTCCGGTCTCCGGGTGTACGTGCATGCGAACGAGAACTGGCGGTCCGTCCGCGAGTGCGTCCGCGAACACGGCGCCACCG
AGATCGAACGGGCAGTGGACCTGCTCGAACCGGAGGGGATCGTTCACTGCGTGGTCCTCACGGACCGCGACCGTGAGCTG
CTGGAGGAGCTGGATCCCGTCGTGATACTCTGTCCCAGGTCGAACGACTACTACCGGCTCGGGAACCCGGATCCCAGACG
ACTTCGGGGTCTCCGGGTGCTCCTGGGGACCGACAACGGAATGTCCGTGGAGCCGGATCCGTGGGCGGAGGCTTACCACG
CGTGGATCCGTACGGGCCTCTCGCCGCTCGGGGCGCTTCGGGCGCTGACAGTCGAAGCCGCGTCCGTCTTCGACCTGCCG
ATATTGGAGGAAGGGCGGCGACTCTCGGCGGTTGGGTTAAAGGGCCTCCCGCTCCCGGAAACCGTGCTCGGGTCCAGACA
GCGTCTGGCCGCCCACGTCCTCCAGTTGATCAAAACGTCGAGGGTTCACGTGCTGTTGGGGGCCGAGAGTTGA

Upstream 100 bases:

>100_bases
CGCTGGCCAACGTCCTCGGTATCGACGTGGAAGAGGTGTTGAAGGAGAAGTACCCGGGCCGGTGTCCCAAGTGCGGTGAG
ATACCGTGTCGTTGCAACGA

Downstream 100 bases:

>100_bases
CCCGGTACGTCGTGCTCCTCGACGGATCCGAGGCGTCTTTCGAGGCGTTGGAGCACGCGCTGGAAGAGGCGGACGAGGTG
ATAGGGGTCTACTTGATCGA

Product: metal-dependent hydrolase related to cytosine deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MKDGVLTAEAGLVGRDLELLSPITIEIEDGRVRRIEEGREPGADDDFDVVLPAPFNAHVHAADWAFRHAGLGMPLEKVVA
PPDGLKHRLLEKVGERELEVSIRDFLETSLSFGCPGVADFREGGVEGLKLGLRAAEGFPTYVPMGRPKALDDPERVEEEL
RVLSELTEFVGIPDVHLPDDVLEAVRDSGLRVYVHANENWRSVRECVREHGATEIERAVDLLEPEGIVHCVVLTDRDREL
LEELDPVVILCPRSNDYYRLGNPDPRRLRGLRVLLGTDNGMSVEPDPWAEAYHAWIRTGLSPLGALRALTVEAASVFDLP
ILEEGRRLSAVGLKGLPLPETVLGSRQRLAAHVLQLIKTSRVHVLLGAES

Sequences:

>Translated_370_residues
MKDGVLTAEAGLVGRDLELLSPITIEIEDGRVRRIEEGREPGADDDFDVVLPAPFNAHVHAADWAFRHAGLGMPLEKVVA
PPDGLKHRLLEKVGERELEVSIRDFLETSLSFGCPGVADFREGGVEGLKLGLRAAEGFPTYVPMGRPKALDDPERVEEEL
RVLSELTEFVGIPDVHLPDDVLEAVRDSGLRVYVHANENWRSVRECVREHGATEIERAVDLLEPEGIVHCVVLTDRDREL
LEELDPVVILCPRSNDYYRLGNPDPRRLRGLRVLLGTDNGMSVEPDPWAEAYHAWIRTGLSPLGALRALTVEAASVFDLP
ILEEGRRLSAVGLKGLPLPETVLGSRQRLAAHVLQLIKTSRVHVLLGAES
>Mature_370_residues
MKDGVLTAEAGLVGRDLELLSPITIEIEDGRVRRIEEGREPGADDDFDVVLPAPFNAHVHAADWAFRHAGLGMPLEKVVA
PPDGLKHRLLEKVGERELEVSIRDFLETSLSFGCPGVADFREGGVEGLKLGLRAAEGFPTYVPMGRPKALDDPERVEEEL
RVLSELTEFVGIPDVHLPDDVLEAVRDSGLRVYVHANENWRSVRECVREHGATEIERAVDLLEPEGIVHCVVLTDRDREL
LEELDPVVILCPRSNDYYRLGNPDPRRLRGLRVLLGTDNGMSVEPDPWAEAYHAWIRTGLSPLGALRALTVEAASVFDLP
ILEEGRRLSAVGLKGLPLPETVLGSRQRLAAHVLQLIKTSRVHVLLGAES

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: NA

Molecular weight: Translated: 40840; Mature: 40840

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDGVLTAEAGLVGRDLELLSPITIEIEDGRVRRIEEGREPGADDDFDVVLPAPFNAHVH
CCCCCEEECCCCCCCCHHHCCCEEEEECCCCCHHHHCCCCCCCCCCCCEEECCCCCCCEE
AADWAFRHAGLGMPLEKVVAPPDGLKHRLLEKVGERELEVSIRDFLETSLSFGCPGVADF
HHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHH
REGGVEGLKLGLRAAEGFPTYVPMGRPKALDDPERVEEELRVLSELTEFVGIPDVHLPDD
HHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH
VLEAVRDSGLRVYVHANENWRSVRECVREHGATEIERAVDLLEPEGIVHCVVLTDRDREL
HHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEECCCHHH
LEELDPVVILCPRSNDYYRLGNPDPRRLRGLRVLLGTDNGMSVEPDPWAEAYHAWIRTGL
HHHCCCEEEEEECCCCEEECCCCCHHHHCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCC
SPLGALRALTVEAASVFDLPILEEGRRLSAVGLKGLPLPETVLGSRQRLAAHVLQLIKTS
CHHHHHHHHHHHHHHHCCCCHHHCCCEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHCC
RVHVLLGAES
CEEEEEECCC
>Mature Secondary Structure
MKDGVLTAEAGLVGRDLELLSPITIEIEDGRVRRIEEGREPGADDDFDVVLPAPFNAHVH
CCCCCEEECCCCCCCCHHHCCCEEEEECCCCCHHHHCCCCCCCCCCCCEEECCCCCCCEE
AADWAFRHAGLGMPLEKVVAPPDGLKHRLLEKVGERELEVSIRDFLETSLSFGCPGVADF
HHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHH
REGGVEGLKLGLRAAEGFPTYVPMGRPKALDDPERVEEELRVLSELTEFVGIPDVHLPDD
HHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH
VLEAVRDSGLRVYVHANENWRSVRECVREHGATEIERAVDLLEPEGIVHCVVLTDRDREL
HHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEEECCCHHH
LEELDPVVILCPRSNDYYRLGNPDPRRLRGLRVLLGTDNGMSVEPDPWAEAYHAWIRTGL
HHHCCCEEEEEECCCCEEECCCCCHHHHCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCC
SPLGALRALTVEAASVFDLPILEEGRRLSAVGLKGLPLPETVLGSRQRLAAHVLQLIKTS
CHHHHHHHHHHHHHHHCCCCHHHCCCEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHCC
RVHVLLGAES
CEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]