| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094487
Identifier: 20094487
GI number: 20094487
Start: 1018337
End: 1018726
Strand: Direct
Name: 20094487
Synonym: MK1051
Alternate gene names: NA
Gene position: 1018337-1018726 (Clockwise)
Preceding gene: 20094486
Following gene: 20094489
Centisome position: 60.08
GC content: 64.1
Gene sequence:
>390_bases TTGACCCGGTACGTCGTGCTCCTCGACGGATCCGAGGCGTCTTTCGAGGCGTTGGAGCACGCGCTGGAAGAGGCGGACGA GGTGATAGGGGTCTACTTGATCGACTGTCGGGCATTCAAGGGGCTGAACGAAGACATGGCGAGGGCGCTGGAGGAGTTCA TGCGGCAGGAGGCGGAGCTGATCCGGGAGACCGTCGAGAAGCGCGGTGCGGAGTTCGAGATCGTGCGAGGTGAGGGTCCC GAGGCCGTGATGGAGTACGCCCGGGAGGTGGGCGCGGACGCCGTGGTGGTAGGCGTGGGTCACATCCCCAGGTTCGAGGA TATAACGTTCCGACGGGGGATCGAGGGGCACGTGAGGGACGTTCCCGTGGTTCTGGTGCCTTCACGTTAA
Upstream 100 bases:
>100_bases CGCTCCCGGAAACCGTGCTCGGGTCCAGACAGCGTCTGGCCGCCCACGTCCTCCAGTTGATCAAAACGTCGAGGGTTCAC GTGCTGTTGGGGGCCGAGAG
Downstream 100 bases:
>100_bases ATCCTTACCCATGTACGGGCCGACGCGCTCGTACCCGAGCTTCCGGTAGTACTCGCGCGTCCCGATGGCACTGATCACGA TGATCTTGTCCGCATCCAGC
Product: nucleotide-binding protein related to universal stress protein, UspA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MTRYVVLLDGSEASFEALEHALEEADEVIGVYLIDCRAFKGLNEDMARALEEFMRQEAELIRETVEKRGAEFEIVRGEGP EAVMEYAREVGADAVVVGVGHIPRFEDITFRRGIEGHVRDVPVVLVPSR
Sequences:
>Translated_129_residues MTRYVVLLDGSEASFEALEHALEEADEVIGVYLIDCRAFKGLNEDMARALEEFMRQEAELIRETVEKRGAEFEIVRGEGP EAVMEYAREVGADAVVVGVGHIPRFEDITFRRGIEGHVRDVPVVLVPSR >Mature_128_residues TRYVVLLDGSEASFEALEHALEEADEVIGVYLIDCRAFKGLNEDMARALEEFMRQEAELIRETVEKRGAEFEIVRGEGPE AVMEYAREVGADAVVVGVGHIPRFEDITFRRGIEGHVRDVPVVLVPSR
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14477; Mature: 14345
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYVVLLDGSEASFEALEHALEEADEVIGVYLIDCRAFKGLNEDMARALEEFMRQEAEL CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCHHHHHHHHHHHHHHHHH IRETVEKRGAEFEIVRGEGPEAVMEYAREVGADAVVVGVGHIPRFEDITFRRGIEGHVRD HHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCC VPVVLVPSR CCEEEECCC >Mature Secondary Structure TRYVVLLDGSEASFEALEHALEEADEVIGVYLIDCRAFKGLNEDMARALEEFMRQEAEL CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEEHHHHCCCCHHHHHHHHHHHHHHHHH IRETVEKRGAEFEIVRGEGPEAVMEYAREVGADAVVVGVGHIPRFEDITFRRGIEGHVRD HHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCC VPVVLVPSR CCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA