| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20094472
Identifier: 20094472
GI number: 20094472
Start: 998337
End: 999296
Strand: Reverse
Name: 20094472
Synonym: MK1036
Alternate gene names: NA
Gene position: 999296-998337 (Counterclockwise)
Preceding gene: 20094473
Following gene: 20094470
Centisome position: 58.96
GC content: 61.88
Gene sequence:
>960_bases TTGCCCGCCCTCGTGCTGATAATCGCGGTATCCATCGCGATGACGCCCGCTCACGGTCGAGTGGGAGGGTTCGTCTCCGG TCATTACTACTTAGACCCGGAGTTCGACGCTCCGAACACCTCTTTCGGGTCCGATATCGACGGAGATGGGCGCGTTGACA GGATCTGGTGCGCGGAGGCGTGCGCGGTGGACATGTACAACTTGGGTGTCGCCATGGGATGGTGGAACGGCGATCCCGTG ACCCCACTTCAGTACGAGATTTCGGCTACGGGGGAACACGACGACGATAACCTCGACATCATCGACGCCTTCCAGGCGAT CGCGGGCTCGGATGCGGCCTCGAAAGTGTTCGAGGTAGCCGTGGTCTCGTTGTTGAACCGTCCCTCGGTGTACCACGCGG TACTCGTCCTCGGGGCCGTCCAAGAGGGATCTCGTCGCTACTTCGTCGTGGACGACGAGTCCACGAGCGACGTGGGGGAG CTTTTGCTGGTCCCTTACGATCTCTTCCTTTCCAACCTTCACCCCGGTATCCTGGAGTTCTTCGGGCCCGTGGAGGTCGT GAACAGGTTGTACTCGGTACTCTCCGGCGCTATCTCCCCGCTGACGGTTATCGTGTCCTCTAAGCGCGGTCGTACCCTCA CGGTCGTCCTGTTGACAGACCTACCCGGTGACTCCCTGGCGGCGTTCACGGAAGAGTTGTGGAAGGCCGCTCTGGAGGGG TACCCCGTCGCCGTCGCGGTTTCCAAACCGTTCCTGGACCTCGGCGGTGTGACCCGGATCCGCTGCGACGCACCGGTGAC GGGAGACGTCGAGACGCGGAGACCACTGAACGGTGTGGAGAGCGGGGAGGGTCCATCACCCCCCCTAGGGATACCGATAC CTTTCATCGGGACCGTCGGGATCGCGGGATTGTTCTTCCTTCTGCTGACGTTCCTCGGGCTCTCTTACCTACCGGTCTAG
Upstream 100 bases:
>100_bases GGTGTGGGGAGAAGGGAAGGTCCTCCGGCGGGGGACGCTGTTCTCGGGGATGAGAACGTCCTACCTGGCGCTCTTCGAGC CCGAGAGGTGAACCCGAATG
Downstream 100 bases:
>100_bases TCCCAGAACCGACGGGTGCGGAGGTAACGGAGGCGCTCCTGCAGTAGCTCACGGTAGAAGTGCGGCTCACGTCCGCCGGT CGATCGGAGCACCTTAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MPALVLIIAVSIAMTPAHGRVGGFVSGHYYLDPEFDAPNTSFGSDIDGDGRVDRIWCAEACAVDMYNLGVAMGWWNGDPV TPLQYEISATGEHDDDNLDIIDAFQAIAGSDAASKVFEVAVVSLLNRPSVYHAVLVLGAVQEGSRRYFVVDDESTSDVGE LLLVPYDLFLSNLHPGILEFFGPVEVVNRLYSVLSGAISPLTVIVSSKRGRTLTVVLLTDLPGDSLAAFTEELWKAALEG YPVAVAVSKPFLDLGGVTRIRCDAPVTGDVETRRPLNGVESGEGPSPPLGIPIPFIGTVGIAGLFFLLLTFLGLSYLPV
Sequences:
>Translated_319_residues MPALVLIIAVSIAMTPAHGRVGGFVSGHYYLDPEFDAPNTSFGSDIDGDGRVDRIWCAEACAVDMYNLGVAMGWWNGDPV TPLQYEISATGEHDDDNLDIIDAFQAIAGSDAASKVFEVAVVSLLNRPSVYHAVLVLGAVQEGSRRYFVVDDESTSDVGE LLLVPYDLFLSNLHPGILEFFGPVEVVNRLYSVLSGAISPLTVIVSSKRGRTLTVVLLTDLPGDSLAAFTEELWKAALEG YPVAVAVSKPFLDLGGVTRIRCDAPVTGDVETRRPLNGVESGEGPSPPLGIPIPFIGTVGIAGLFFLLLTFLGLSYLPV >Mature_318_residues PALVLIIAVSIAMTPAHGRVGGFVSGHYYLDPEFDAPNTSFGSDIDGDGRVDRIWCAEACAVDMYNLGVAMGWWNGDPVT PLQYEISATGEHDDDNLDIIDAFQAIAGSDAASKVFEVAVVSLLNRPSVYHAVLVLGAVQEGSRRYFVVDDESTSDVGEL LLVPYDLFLSNLHPGILEFFGPVEVVNRLYSVLSGAISPLTVIVSSKRGRTLTVVLLTDLPGDSLAAFTEELWKAALEGY PVAVAVSKPFLDLGGVTRIRCDAPVTGDVETRRPLNGVESGEGPSPPLGIPIPFIGTVGIAGLFFLLLTFLGLSYLPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33968; Mature: 33837
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALVLIIAVSIAMTPAHGRVGGFVSGHYYLDPEFDAPNTSFGSDIDGDGRVDRIWCAEA CCHHHEEEHHHHHCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCCCCEEEEEEHHH CAVDMYNLGVAMGWWNGDPVTPLQYEISATGEHDDDNLDIIDAFQAIAGSDAASKVFEVA HHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH VVSLLNRPSVYHAVLVLGAVQEGSRRYFVVDDESTSDVGELLLVPYDLFLSNLHPGILEF HHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHEEEHHHHHHHHCCCHHHHHH FGPVEVVNRLYSVLSGAISPLTVIVSSKRGRTLTVVLLTDLPGDSLAAFTEELWKAALEG CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCC YPVAVAVSKPFLDLGGVTRIRCDAPVTGDVETRRPLNGVESGEGPSPPLGIPIPFIGTVG CCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH IAGLFFLLLTFLGLSYLPV HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PALVLIIAVSIAMTPAHGRVGGFVSGHYYLDPEFDAPNTSFGSDIDGDGRVDRIWCAEA CHHHEEEHHHHHCCCCCCCCCCEEECEEEECCCCCCCCCCCCCCCCCCCCEEEEEEHHH CAVDMYNLGVAMGWWNGDPVTPLQYEISATGEHDDDNLDIIDAFQAIAGSDAASKVFEVA HHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH VVSLLNRPSVYHAVLVLGAVQEGSRRYFVVDDESTSDVGELLLVPYDLFLSNLHPGILEF HHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHEEEHHHHHHHHCCCHHHHHH FGPVEVVNRLYSVLSGAISPLTVIVSSKRGRTLTVVLLTDLPGDSLAAFTEELWKAALEG CCHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCC YPVAVAVSKPFLDLGGVTRIRCDAPVTGDVETRRPLNGVESGEGPSPPLGIPIPFIGTVG CCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH IAGLFFLLLTFLGLSYLPV HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA