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The map label for this gene is 20094458

Identifier: 20094458

GI number: 20094458

Start: 984769

End: 984969

Strand: Reverse

Name: 20094458

Synonym: MK1022

Alternate gene names: NA

Gene position: 984969-984769 (Counterclockwise)

Preceding gene: 20094459

Following gene: 20094456

Centisome position: 58.11

GC content: 51.24

Gene sequence:

>201_bases
TTGGAAGGGAAGGACAAGCCCGTGGATGTTGGGGACGTCTACGAGGTAAAGATCGAGGACACAGGGAAGCGAGGTGACGG
TGTCGCGAGGGTCAATGGGTTCGTAATATTCGTACCAGAAGCGGAGAAGGGTGACAAGGTGCTAGTGAAAATAGTGTCAG
TACGTGACACGTACGCCATAGGCAGAATTGTTGAAATCTAG

Upstream 100 bases:

>100_bases
CCGTGTCCGCATCTGAACCGTCGGGAGACACGCTGGGGGAAAACTATAAGTAATGTGAATTCCCGGAAATCCGCGTTCTC
GGTGAAGGAGGTGTGAAGGT

Downstream 100 bases:

>100_bases
TGGGGCGGTTCCCCCACCGCCCACACGTATCGTTTCAGTTCTCAGGACGTTCCATGATCTCGCGGACCGTCCTCACAGCC
TCACGTGCCTTCTCGATCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MEGKDKPVDVGDVYEVKIEDTGKRGDGVARVNGFVIFVPEAEKGDKVLVKIVSVRDTYAIGRIVEI

Sequences:

>Translated_66_residues
MEGKDKPVDVGDVYEVKIEDTGKRGDGVARVNGFVIFVPEAEKGDKVLVKIVSVRDTYAIGRIVEI
>Mature_66_residues
MEGKDKPVDVGDVYEVKIEDTGKRGDGVARVNGFVIFVPEAEKGDKVLVKIVSVRDTYAIGRIVEI

Specific function: Unknown

COG id: COG3269

COG function: function code R; Predicted RNA-binding protein, contains TRAM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016027
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01938 TRAM [H]

EC number: NA

Molecular weight: Translated: 7220; Mature: 7220

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGKDKPVDVGDVYEVKIEDTGKRGDGVARVNGFVIFVPEAEKGDKVLVKIVSVRDTYAI
CCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCEEEEEECCCCCCEEEEEEEECCCCCCE
GRIVEI
EEEEEC
>Mature Secondary Structure
MEGKDKPVDVGDVYEVKIEDTGKRGDGVARVNGFVIFVPEAEKGDKVLVKIVSVRDTYAI
CCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCEEEEEECCCCCCEEEEEEEECCCCCCE
GRIVEI
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]