Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094456

Identifier: 20094456

GI number: 20094456

Start: 982920

End: 983942

Strand: Reverse

Name: 20094456

Synonym: MK1020

Alternate gene names: NA

Gene position: 983942-982920 (Counterclockwise)

Preceding gene: 20094458

Following gene: 20094455

Centisome position: 58.05

GC content: 60.8

Gene sequence:

>1023_bases
ATGCTAACGGTGTTTTTGCTAGCGTTGTTGATATCACCGGTTGGATGCTCGGGGATGAAGCTCGGAGCGGTATGGATATC
GCGTGAAAGCGGTTACACACATCATCTATTCCTGGTGGACAACGCCAGTGGAGCGCTCTGGTACCTGGGCACCGACGCGT
CGCCCGGACCGCGACCGTGGGTCCTTGAGCGTACACTGCGGAAGCCTGAGCCGTTGATACCGGGCGAGGTGCATCCGGAC
GCACTGGGTGCCGTCGTGATCCCGTTCAAGCCCGGTGAATGGCCGGGAGTAGCACTGTGCTCGGACCCCACGACCGCGGC
GACGTTCCGGAGGCTGTTGGATCGTCCGGAACTGCGAACGATCCTCAACGGTCCGGTGATCGTGACGACGGAGGTACAGG
GTAGGCCTTGCTGTATCGTCAGGAGGACACCGGACGGGTTCGAGTTCGCGTTCGAGGATGGGACCGACGCCGACTACAAC
GATGCCGTCATAGAGGTGACCCTTGAGGCGGTCGTGGTCTCGGTAGGGGAGTTGAAGATCTCGATCAAGCGCGAATCTCC
GGAGGAGTACGACGTTTTGTTGCTGGACCGGTCCACGGGCTCAGTGATACGAATAACCCCGGATGGTGAAGCTTCACCGA
TTATCGGAACACTGGACGTGCACCCGGAACGTCTCGGCATCGCGCTGAAAGGTGAAGACACTGTCCTATGCTCGGACGCG
GAGACGGCCGAGGTGCTCAGGAAGTTGGCCGAAGAGTCGCCGGAACTCCGGGCATTCCTCGACGGCGCCATAATAGCGTG
GACGACGGAGGTCGTCGGACGGAGGGTAGACGCGTGTCGCGGGTCGACCAAGTGCGAGCACGGTGTATGGTACCTGAGGT
TCGGGTTCGAGGATGGTTGGGACGGGGTAGTGGACTACGACGACGTGATCGTCGAGATCACCGGACCGCGTGGTAACTTC
AATCCTTTATCCGTGCTCCCGTTGATTCTGATGCCGAGGGGGCGGAACCCGTGGCGGTCGTGA

Upstream 100 bases:

>100_bases
GCTCGTTCACGCGCTCCGGATCTGCCCACCAATCGCCCAGTGCAAGAGTCGAAACCAGAACGGTCACGTAGGTTACCCCC
CACGGATCGGGGGAGCGGCG

Downstream 100 bases:

>100_bases
TGGAGATTTCGTTCTACCCGATCGGAACCGGATCACCGAGCGTCAGTGATGAGATAGTCGAGGTAGTGAAAGCCCTGAAG
GAAGCCGGGTTCGAGCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MLTVFLLALLISPVGCSGMKLGAVWISRESGYTHHLFLVDNASGALWYLGTDASPGPRPWVLERTLRKPEPLIPGEVHPD
ALGAVVIPFKPGEWPGVALCSDPTTAATFRRLLDRPELRTILNGPVIVTTEVQGRPCCIVRRTPDGFEFAFEDGTDADYN
DAVIEVTLEAVVVSVGELKISIKRESPEEYDVLLLDRSTGSVIRITPDGEASPIIGTLDVHPERLGIALKGEDTVLCSDA
ETAEVLRKLAEESPELRAFLDGAIIAWTTEVVGRRVDACRGSTKCEHGVWYLRFGFEDGWDGVVDYDDVIVEITGPRGNF
NPLSVLPLILMPRGRNPWRS

Sequences:

>Translated_340_residues
MLTVFLLALLISPVGCSGMKLGAVWISRESGYTHHLFLVDNASGALWYLGTDASPGPRPWVLERTLRKPEPLIPGEVHPD
ALGAVVIPFKPGEWPGVALCSDPTTAATFRRLLDRPELRTILNGPVIVTTEVQGRPCCIVRRTPDGFEFAFEDGTDADYN
DAVIEVTLEAVVVSVGELKISIKRESPEEYDVLLLDRSTGSVIRITPDGEASPIIGTLDVHPERLGIALKGEDTVLCSDA
ETAEVLRKLAEESPELRAFLDGAIIAWTTEVVGRRVDACRGSTKCEHGVWYLRFGFEDGWDGVVDYDDVIVEITGPRGNF
NPLSVLPLILMPRGRNPWRS
>Mature_340_residues
MLTVFLLALLISPVGCSGMKLGAVWISRESGYTHHLFLVDNASGALWYLGTDASPGPRPWVLERTLRKPEPLIPGEVHPD
ALGAVVIPFKPGEWPGVALCSDPTTAATFRRLLDRPELRTILNGPVIVTTEVQGRPCCIVRRTPDGFEFAFEDGTDADYN
DAVIEVTLEAVVVSVGELKISIKRESPEEYDVLLLDRSTGSVIRITPDGEASPIIGTLDVHPERLGIALKGEDTVLCSDA
ETAEVLRKLAEESPELRAFLDGAIIAWTTEVVGRRVDACRGSTKCEHGVWYLRFGFEDGWDGVVDYDDVIVEITGPRGNF
NPLSVLPLILMPRGRNPWRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37225; Mature: 37225

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTVFLLALLISPVGCSGMKLGAVWISRESGYTHHLFLVDNASGALWYLGTDASPGPRPW
CHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCEEEEEECCCCCCCCCH
VLERTLRKPEPLIPGEVHPDALGAVVIPFKPGEWPGVALCSDPTTAATFRRLLDRPELRT
HHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHCCCHHHH
ILNGPVIVTTEVQGRPCCIVRRTPDGFEFAFEDGTDADYNDAVIEVTLEAVVVSVGELKI
HHCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEEEEHEEEEEEEEEE
SIKRESPEEYDVLLLDRSTGSVIRITPDGEASPIIGTLDVHPERLGIALKGEDTVLCSDA
EEECCCCCCEEEEEEECCCCCEEEECCCCCCCCEEEEEECCHHHEEEEECCCCEEEECCC
ETAEVLRKLAEESPELRAFLDGAIIAWTTEVVGRRVDACRGSTKCEHGVWYLRFGFEDGW
HHHHHHHHHHHCCCCEEHHHCCEEEEEEHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
DGVVDYDDVIVEITGPRGNFNPLSVLPLILMPRGRNPWRS
CCCEECCEEEEEEECCCCCCCHHHEEEEEEECCCCCCCCC
>Mature Secondary Structure
MLTVFLLALLISPVGCSGMKLGAVWISRESGYTHHLFLVDNASGALWYLGTDASPGPRPW
CHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCEEEEEECCCCCCCCCH
VLERTLRKPEPLIPGEVHPDALGAVVIPFKPGEWPGVALCSDPTTAATFRRLLDRPELRT
HHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHCCCHHHH
ILNGPVIVTTEVQGRPCCIVRRTPDGFEFAFEDGTDADYNDAVIEVTLEAVVVSVGELKI
HHCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEEEEHEEEEEEEEEE
SIKRESPEEYDVLLLDRSTGSVIRITPDGEASPIIGTLDVHPERLGIALKGEDTVLCSDA
EEECCCCCCEEEEEEECCCCCEEEECCCCCCCCEEEEEECCHHHEEEEECCCCEEEECCC
ETAEVLRKLAEESPELRAFLDGAIIAWTTEVVGRRVDACRGSTKCEHGVWYLRFGFEDGW
HHHHHHHHHHHCCCCEEHHHCCEEEEEEHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCC
DGVVDYDDVIVEITGPRGNFNPLSVLPLILMPRGRNPWRS
CCCEECCEEEEEEECCCCCCCHHHEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA