| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094404
Identifier: 20094404
GI number: 20094404
Start: 928083
End: 928427
Strand: Direct
Name: 20094404
Synonym: MK0968
Alternate gene names: NA
Gene position: 928083-928427 (Clockwise)
Preceding gene: 20094403
Following gene: 20094405
Centisome position: 54.76
GC content: 61.74
Gene sequence:
>345_bases ATGGCTCGGGTGCTCTTGAACATCCACGGGACCGGAGACACCGTGGTCCTCGCCCTATGCGACGAGGATCTCCTGGGTGT GGAGTTGAAGTACAAAGGGCGCACCCTACATATCTCCGAGCCCTTCTACAGTGGAAAGTCCCTCGAACCGGACCGCGCCG CGAAGAAGATCCGGGAGGCCGTCCAGGAGTACGAGGACGAGAAGACAGTTGCAATCAACGCCCTAGGCGAGCTCGCTTGC TCCGTCGTCGTCGACGCGGGTCTCGCCAGGGAGGATGAGATAGGGGAGCTGGGAGGGGTCCCACACGTCCAGATCTACAT CCTCCCGCGGGAGCCGTTCCTTTGA
Upstream 100 bases:
>100_bases GTGCGGGAAACCCGACACCAAGCTCGTCAGAGAGGATCGGCAGTGGATTCTCAAATGCGAAGCTTGCGGTGCCTGGTCCT CGGTTCGGAGGCTGAAGTGA
Downstream 100 bases:
>100_bases CCTCGGGAGTACTGTGCACGACCGCTCCGGGCCTCGAGGACGTCTGTGCCCAGGAACTCGGCGAGATCACCGGAAAATCC GTGCGTGAGAACTACCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MARVLLNIHGTGDTVVLALCDEDLLGVELKYKGRTLHISEPFYSGKSLEPDRAAKKIREAVQEYEDEKTVAINALGELAC SVVVDAGLAREDEIGELGGVPHVQIYILPREPFL
Sequences:
>Translated_114_residues MARVLLNIHGTGDTVVLALCDEDLLGVELKYKGRTLHISEPFYSGKSLEPDRAAKKIREAVQEYEDEKTVAINALGELAC SVVVDAGLAREDEIGELGGVPHVQIYILPREPFL >Mature_113_residues ARVLLNIHGTGDTVVLALCDEDLLGVELKYKGRTLHISEPFYSGKSLEPDRAAKKIREAVQEYEDEKTVAINALGELACS VVVDAGLAREDEIGELGGVPHVQIYILPREPFL
Specific function: Unknown
COG id: COG2412
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12488; Mature: 12357
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVLLNIHGTGDTVVLALCDEDLLGVELKYKGRTLHISEPFYSGKSLEPDRAAKKIREA CCEEEEEEECCCCEEEEEEECCCCEEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHH VQEYEDEKTVAINALGELACSVVVDAGLAREDEIGELGGVPHVQIYILPREPFL HHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEEECCCCCC >Mature Secondary Structure ARVLLNIHGTGDTVVLALCDEDLLGVELKYKGRTLHISEPFYSGKSLEPDRAAKKIREA CEEEEEEECCCCEEEEEEECCCCEEEEEEECCCEEEECCCCCCCCCCCHHHHHHHHHHH VQEYEDEKTVAINALGELACSVVVDAGLAREDEIGELGGVPHVQIYILPREPFL HHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA