| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20094398
Identifier: 20094398
GI number: 20094398
Start: 923454
End: 923702
Strand: Direct
Name: 20094398
Synonym: MK0962
Alternate gene names: NA
Gene position: 923454-923702 (Clockwise)
Preceding gene: 20094396
Following gene: 20094399
Centisome position: 54.48
GC content: 61.04
Gene sequence:
>249_bases TTGCCGGAAGACCCCCTTCGCGGCTACGAGCCTTCGGTGAGGGATTACTTGGCCCGATGTGACACCGACGAGGAGGCGCT GGAGGTGCTCCAGTACCTGGTGAAGCGGGGTGAGCTGGACGAGGAGCGTGCGTCCGAACTCGAACGGGAAATCCGAGAAA AGGGAGTTAGATCGCTGGTGGAACGCAGGCACTTCGGCTATTACCTGGAGCGCTATTACGACCCGGAGGAACGAAGGTAC CGCGGGTGA
Upstream 100 bases:
>100_bases TCCCGGTACCGCGCGGCGGCCTCACGCGCTCTCCTGTCTTCACTGAGTAACCCGCGACCGATATTATCGACCACCTCTCC TACCCCCATGGGGACCGCTC
Downstream 100 bases:
>100_bases GCCGACGTGTCATCGGGGGCCGTGGAGCGATCCCCGGCCGTCGCGGGTCAGTTCTACCCCGCCGACCCGGAGGAGTTGAG GAAGATGATCGAGTGGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MPEDPLRGYEPSVRDYLARCDTDEEALEVLQYLVKRGELDEERASELEREIREKGVRSLVERRHFGYYLERYYDPEERRY RG
Sequences:
>Translated_82_residues MPEDPLRGYEPSVRDYLARCDTDEEALEVLQYLVKRGELDEERASELEREIREKGVRSLVERRHFGYYLERYYDPEERRY RG >Mature_81_residues PEDPLRGYEPSVRDYLARCDTDEEALEVLQYLVKRGELDEERASELEREIREKGVRSLVERRHFGYYLERYYDPEERRYR G
Specific function: Unknown
COG id: COG4003
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10046; Mature: 9915
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEDPLRGYEPSVRDYLARCDTDEEALEVLQYLVKRGELDEERASELEREIREKGVRSLV CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ERRHFGYYLERYYDPEERRYRG HHHHHHHHHHHHCCHHHHCCCC >Mature Secondary Structure PEDPLRGYEPSVRDYLARCDTDEEALEVLQYLVKRGELDEERASELEREIREKGVRSLV CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ERRHFGYYLERYYDPEERRYRG HHHHHHHHHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA