| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is wrbA [C]
Identifier: 20094374
GI number: 20094374
Start: 896885
End: 897463
Strand: Reverse
Name: wrbA [C]
Synonym: MK0938
Alternate gene names: 20094374
Gene position: 897463-896885 (Counterclockwise)
Preceding gene: 20094376
Following gene: 20094373
Centisome position: 52.95
GC content: 59.59
Gene sequence:
>579_bases ATGATTTTAGGCATCTCCGGGAGCCCGCGGGAAGGGAACACGGAGTACCTCGTGAGGATCGCCCTCGAGGCCGCGGAGGA GGTGTCCGGTGAGGAGACGGAGTTCATCACCGTGCGAGATCTGGATATCTCCCCCTGCGAAGCGTGTGGCGAGTGTCTGG AAACGGGCGAGTGCGCCATAGATGACGACATGCAGGACGTTTACGAGCTGATGCGCGAGTGTGACGGGATGATCGTGGGC TCCCCCGTGTACTACGGCGGCGTGAGTGCGCAACTGAAGGCGCTGATAGATAGAACACGCCCACTGAGGATAAATTGGGA GTTGAAAGACAAAGTCGGGGGAGCCATCGCCATAGGAGGTGCCCGTAACGGAGGTCAGGAGCACACACTACGGGACATCC AGAACTTCTTCATGATCCACGCCATGATCGTGGTCGGAGACTCGGACCCCACGGCGCACTTCGGTGGTGCGGGCGTAGGA CTCGAGCCCGGAGACGTGGAGGAGGATGAAACGGGTATCGAAACGGCGCGTAATACCGGCCGTCGTGTGGGCGAAGTCGT CAAATTGATCAAGGGTTGA
Upstream 100 bases:
>100_bases CCTCGGTCAGGCTTTCCGCGATGTTTTTAGAGGCTGGGTCGTCCGGGTTCCATAGTATCACGACGCGTCTCAACTCGAAA CCCCGGGGGTGCGACGTAGG
Downstream 100 bases:
>100_bases TAAGGGCCGGGCTGTTCAGGGATGGAGGAGGCCGATAACCCCGTACTTAATCTGGTCGCCTGCCTCTCTCGCGCCTTTGA CTCTCTCGACTCCGCCGAAA
Product: WrbA family multimeric flavodoxin
Products: NA
Alternate protein names: Isf-2; MCJ-2; Mj2 [H]
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MILGISGSPREGNTEYLVRIALEAAEEVSGEETEFITVRDLDISPCEACGECLETGECAIDDDMQDVYELMRECDGMIVG SPVYYGGVSAQLKALIDRTRPLRINWELKDKVGGAIAIGGARNGGQEHTLRDIQNFFMIHAMIVVGDSDPTAHFGGAGVG LEPGDVEEDETGIETARNTGRRVGEVVKLIKG
Sequences:
>Translated_192_residues MILGISGSPREGNTEYLVRIALEAAEEVSGEETEFITVRDLDISPCEACGECLETGECAIDDDMQDVYELMRECDGMIVG SPVYYGGVSAQLKALIDRTRPLRINWELKDKVGGAIAIGGARNGGQEHTLRDIQNFFMIHAMIVVGDSDPTAHFGGAGVG LEPGDVEEDETGIETARNTGRRVGEVVKLIKG >Mature_192_residues MILGISGSPREGNTEYLVRIALEAAEEVSGEETEFITVRDLDISPCEACGECLETGECAIDDDMQDVYELMRECDGMIVG SPVYYGGVSAQLKALIDRTRPLRINWELKDKVGGAIAIGGARNGGQEHTLRDIQNFFMIHAMIVVGDSDPTAHFGGAGVG LEPGDVEEDETGIETARNTGRRVGEVVKLIKG
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 20661; Mature: 20661
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILGISGSPREGNTEYLVRIALEAAEEVSGEETEFITVRDLDISPCEACGECLETGECAI CEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCC DDDMQDVYELMRECDGMIVGSPVYYGGVSAQLKALIDRTRPLRINWELKDKVGGAIAIGG CCCHHHHHHHHHHHCCEEECCCEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEECC ARNGGQEHTLRDIQNFFMIHAMIVVGDSDPTAHFGGAGVGLEPGDVEEDETGIETARNTG CCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH RRVGEVVKLIKG HHHHHHHHHHCC >Mature Secondary Structure MILGISGSPREGNTEYLVRIALEAAEEVSGEETEFITVRDLDISPCEACGECLETGECAI CEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCC DDDMQDVYELMRECDGMIVGSPVYYGGVSAQLKALIDRTRPLRINWELKDKVGGAIAIGG CCCHHHHHHHHHHHCCEEECCCEEECCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEECC ARNGGQEHTLRDIQNFFMIHAMIVVGDSDPTAHFGGAGVGLEPGDVEEDETGIETARNTG CCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH RRVGEVVKLIKG HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]