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The map label for this gene is 20094371

Identifier: 20094371

GI number: 20094371

Start: 894329

End: 895165

Strand: Reverse

Name: 20094371

Synonym: MK0935

Alternate gene names: NA

Gene position: 895165-894329 (Counterclockwise)

Preceding gene: 20094373

Following gene: 20094370

Centisome position: 52.81

GC content: 62.25

Gene sequence:

>837_bases
ATGAAGGTGAGCCTAGCGGGGCAAACGGTGGATGTGAAGAAGATCCTGAACGAAATTCCGAAACGCACGGTCACAGCGGC
CTTGCTGGAGGGCGGAGAGATCGTAGCCGTCGAGGAAGCCGACGACGAGCATGCCGAGCGTAAGTTAGTACGACGACACG
ACGTCGAAGGAAAGGTGGTCTTCGTGACCGCCAGACCGTGCCTCTATTGCGCTCGGGAACTCGCGGAAGCCGGTGTGGCG
GGCGTCGTATACCTCGGCCGAGGCCGAGGTCTCGGTCCCTACTACCTGGCCAGGAGCGGCGTGGAGGTGGTGGAGGTCCA
CCCCGATGAGCCGTTAGGCTACGACCCGGTGGACCGGTTGGACGTGCTCCTGACGTTCGGGGGTAACCCCTATCTCACCG
AGGAGGACGTAGCCGCCCGAGTTTATTGCCTGCTGACGGGGCGTGGATTCGACGCCGATATCGCCCCAGCCCCCGAGAAC
CTCTCAGGTCGAGTCGAGATAATGGTGACCAGGGGCGACCCCGACGAAGCCGTCGAGCTCCTTAAGGAAGAGCTCCCCGT
GTTCCGTATCAGACGGTTCCTGATCAGCGGCGAGTTCGACCGTGACGAGCTCAGGGAAAGGATCCTCGAGGACATCGAAC
CTCGCATCCTCGACCCCTTCGCCGTCAGGGCCCGGATCGCACGAGCCGGGGCGTTCTCCTCCTCACGTGAAGCCGAGGTG
TTCATAGGGGACGTACTTACATCCGTCGGTCGCGAGGTTAACTTGAACGACCCGAGAACAGTCGTCACCGTAGACGTCCT
GGGACCGAGGGTGTCCGTCGGCGTTGAGAAGCGTTGA

Upstream 100 bases:

>100_bases
GTCATCCGGACCTGAGCGACACCTACGACCATGTAGTCCCTAACGTACAGGCGCTCCGGCATCTCGAATCTCCCTGTGGT
AGTTACAGGGGAGCGACGTT

Downstream 100 bases:

>100_bases
GTACCTCGCGTACCTGCGATCCAAGTACGGGATCCGTCCCAGGCGACGCTTGGGCCAGCACTTCATGGTAGACGATAATA
TCCTGGAGTTCATGGTGGAG

Product: RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKVSLAGQTVDVKKILNEIPKRTVTAALLEGGEIVAVEEADDEHAERKLVRRHDVEGKVVFVTARPCLYCARELAEAGVA
GVVYLGRGRGLGPYYLARSGVEVVEVHPDEPLGYDPVDRLDVLLTFGGNPYLTEEDVAARVYCLLTGRGFDADIAPAPEN
LSGRVEIMVTRGDPDEAVELLKEELPVFRIRRFLISGEFDRDELRERILEDIEPRILDPFAVRARIARAGAFSSSREAEV
FIGDVLTSVGREVNLNDPRTVVTVDVLGPRVSVGVEKR

Sequences:

>Translated_278_residues
MKVSLAGQTVDVKKILNEIPKRTVTAALLEGGEIVAVEEADDEHAERKLVRRHDVEGKVVFVTARPCLYCARELAEAGVA
GVVYLGRGRGLGPYYLARSGVEVVEVHPDEPLGYDPVDRLDVLLTFGGNPYLTEEDVAARVYCLLTGRGFDADIAPAPEN
LSGRVEIMVTRGDPDEAVELLKEELPVFRIRRFLISGEFDRDELRERILEDIEPRILDPFAVRARIARAGAFSSSREAEV
FIGDVLTSVGREVNLNDPRTVVTVDVLGPRVSVGVEKR
>Mature_278_residues
MKVSLAGQTVDVKKILNEIPKRTVTAALLEGGEIVAVEEADDEHAERKLVRRHDVEGKVVFVTARPCLYCARELAEAGVA
GVVYLGRGRGLGPYYLARSGVEVVEVHPDEPLGYDPVDRLDVLLTFGGNPYLTEEDVAARVYCLLTGRGFDADIAPAPEN
LSGRVEIMVTRGDPDEAVELLKEELPVFRIRRFLISGEFDRDELRERILEDIEPRILDPFAVRARIARAGAFSSSREAEV
FIGDVLTSVGREVNLNDPRTVVTVDVLGPRVSVGVEKR

Specific function: Unknown

COG id: COG2131

COG function: function code F; Deoxycytidylate deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30618; Mature: 30618

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS51165 THUMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSLAGQTVDVKKILNEIPKRTVTAALLEGGEIVAVEEADDEHAERKLVRRHDVEGKVV
CEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEE
FVTARPCLYCARELAEAGVAGVVYLGRGRGLGPYYLARSGVEVVEVHPDEPLGYDPVDRL
EEECCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCCCEEEEECCCCCCCCCCHHHE
DVLLTFGGNPYLTEEDVAARVYCLLTGRGFDADIAPAPENLSGRVEIMVTRGDPDEAVEL
EEEEEECCCCCCCCHHHHEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHH
LKEELPVFRIRRFLISGEFDRDELRERILEDIEPRILDPFAVRARIARAGAFSSSREAEV
HHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHCCCCCCCCCHH
FIGDVLTSVGREVNLNDPRTVVTVDVLGPRVSVGVEKR
HHHHHHHHCCCEECCCCCCEEEEEEECCCEEECCCCCC
>Mature Secondary Structure
MKVSLAGQTVDVKKILNEIPKRTVTAALLEGGEIVAVEEADDEHAERKLVRRHDVEGKVV
CEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEE
FVTARPCLYCARELAEAGVAGVVYLGRGRGLGPYYLARSGVEVVEVHPDEPLGYDPVDRL
EEECCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCCCEEEEECCCCCCCCCCHHHE
DVLLTFGGNPYLTEEDVAARVYCLLTGRGFDADIAPAPENLSGRVEIMVTRGDPDEAVEL
EEEEEECCCCCCCCHHHHEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHH
LKEELPVFRIRRFLISGEFDRDELRERILEDIEPRILDPFAVRARIARAGAFSSSREAEV
HHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHCCCCCCCCCHH
FIGDVLTSVGREVNLNDPRTVVTVDVLGPRVSVGVEKR
HHHHHHHHCCCEECCCCCCEEEEEEECCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA