Definition | Methanopyrus kandleri AV19, complete genome. |
---|---|
Accession | NC_003551 |
Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20094330
Identifier: 20094330
GI number: 20094330
Start: 842475
End: 843281
Strand: Direct
Name: 20094330
Synonym: MK0894
Alternate gene names: NA
Gene position: 842475-843281 (Clockwise)
Preceding gene: 20094327
Following gene: 20094335
Centisome position: 49.7
GC content: 66.54
Gene sequence:
>807_bases TTGTTCGCGTTCCTACTCGCCGGGGATAACGTTGAGTTGGCGCTAATGGAATTAAAGGGCGCGCTCCGGGCGGAGGTCGG CGAGATCGAAGTCGAGGTCCACGATCGGGTCGCGGTGGTCGAAGGACTCACTGACGAGGAGGCGGAGCGGGTCGTCCGGC GGCTCGCCCGGACGCATGCGGTCTACCGGGTCGGCGAGGGGAGGGTCAGGGTCGAGATTGGGGGTGAGCGTAGACCAGTC CGGCTCCTCGCGGAGCGTGAGAAGCTGTCCGATCGTAAGCCGCACAAGCGCCCCGAGTTCATGCCCGACTCCACGGAGCC TTTCCTGGCCCGGGTCCTGGTCAACCTGGCCGAGGCGCGGCGCGGGGAGCGCTTACTGGACCCGATGTGCAACGTGGGCG GTATCCTCATCGAGGCGGGACTGATCGGCTGCGTGCCCGTCGGGGTGGAGGTCCGGGAGGAACTCGTGGAGCGGACCGAG CGTAACCTGCGGCACTACAGGATCGAGGAGTACGAGCTACACACGGGTCGGGCGGAGGAGGTAGACGAGATCCTAGACGA GCCCGTCCAGGCCGCCGCCGTGGACCCGCCATACGGCCGCTCTTCGTACATCGAGGGCGGGCCGGTGGAGCGGCTGCTAC TCAACACGTTGGACGCGTTGTCTGAGGTGGTCGAGGGCAAGGTCTCCCTGACCGCGCCCGTGGACGCCTGGGAAGAAGTT AAAGAGAGTGTGAAGAGGGTAGAGGGCGAGGTTCGGGACCGGGTCCACGGCAGCCTTACCCGGGTCATCGCCGTCGTCGT GCCTTAG
Upstream 100 bases:
>100_bases AGCGCGTCCAGCTCGAAGTGCGAGCTCTGGAGTTAGGAACTCCCCTACTCTACCGCGGATACCGGACGTACCGAAGTATT TACCCACGGGGGGTCCCCCT
Downstream 100 bases:
>100_bases CGGTGATGACCGCGGACCGCTCCTGATCTGTGATGAGTTTTCGGGGAGCTGATCACCGGCTCAGGTACGACAGCACCGCG CGGATCCCGGACTTAACGAT
Product: DNA-modification methylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MFAFLLAGDNVELALMELKGALRAEVGEIEVEVHDRVAVVEGLTDEEAERVVRRLARTHAVYRVGEGRVRVEIGGERRPV RLLAEREKLSDRKPHKRPEFMPDSTEPFLARVLVNLAEARRGERLLDPMCNVGGILIEAGLIGCVPVGVEVREELVERTE RNLRHYRIEEYELHTGRAEEVDEILDEPVQAAAVDPPYGRSSYIEGGPVERLLLNTLDALSEVVEGKVSLTAPVDAWEEV KESVKRVEGEVRDRVHGSLTRVIAVVVP
Sequences:
>Translated_268_residues MFAFLLAGDNVELALMELKGALRAEVGEIEVEVHDRVAVVEGLTDEEAERVVRRLARTHAVYRVGEGRVRVEIGGERRPV RLLAEREKLSDRKPHKRPEFMPDSTEPFLARVLVNLAEARRGERLLDPMCNVGGILIEAGLIGCVPVGVEVREELVERTE RNLRHYRIEEYELHTGRAEEVDEILDEPVQAAAVDPPYGRSSYIEGGPVERLLLNTLDALSEVVEGKVSLTAPVDAWEEV KESVKRVEGEVRDRVHGSLTRVIAVVVP >Mature_268_residues MFAFLLAGDNVELALMELKGALRAEVGEIEVEVHDRVAVVEGLTDEEAERVVRRLARTHAVYRVGEGRVRVEIGGERRPV RLLAEREKLSDRKPHKRPEFMPDSTEPFLARVLVNLAEARRGERLLDPMCNVGGILIEAGLIGCVPVGVEVREELVERTE RNLRHYRIEEYELHTGRAEEVDEILDEPVQAAAVDPPYGRSSYIEGGPVERLLLNTLDALSEVVEGKVSLTAPVDAWEEV KESVKRVEGEVRDRVHGSLTRVIAVVVP
Specific function: Unknown
COG id: COG1041
COG function: function code L; Predicted DNA modification methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 THUMP domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005885 - InterPro: IPR002052 - InterPro: IPR002296 - InterPro: IPR000241 - InterPro: IPR004114 [H]
Pfam domain/function: PF02926 THUMP; PF01170 UPF0020 [H]
EC number: NA
Molecular weight: Translated: 29972; Mature: 29972
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAFLLAGDNVELALMELKGALRAEVGEIEVEVHDRVAVVEGLTDEEAERVVRRLARTHA CEEEEEECCCCEEHHHHHHHHHHHHHCEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHH VYRVGEGRVRVEIGGERRPVRLLAEREKLSDRKPHKRPEFMPDSTEPFLARVLVNLAEAR HEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RGERLLDPMCNVGGILIEAGLIGCVPVGVEVREELVERTERNLRHYRIEEYELHTGRAEE CCHHHHHHHHCCCHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHCCCHHEEECCCCHHH VDEILDEPVQAAAVDPPYGRSSYIEGGPVERLLLNTLDALSEVVEGKVSLTAPVDAWEEV HHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHH KESVKRVEGEVRDRVHGSLTRVIAVVVP HHHHHHHHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MFAFLLAGDNVELALMELKGALRAEVGEIEVEVHDRVAVVEGLTDEEAERVVRRLARTHA CEEEEEECCCCEEHHHHHHHHHHHHHCEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHH VYRVGEGRVRVEIGGERRPVRLLAEREKLSDRKPHKRPEFMPDSTEPFLARVLVNLAEAR HEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH RGERLLDPMCNVGGILIEAGLIGCVPVGVEVREELVERTERNLRHYRIEEYELHTGRAEE CCHHHHHHHHCCCHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHCCCHHEEECCCCHHH VDEILDEPVQAAAVDPPYGRSSYIEGGPVERLLLNTLDALSEVVEGKVSLTAPVDAWEEV HHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHH KESVKRVEGEVRDRVHGSLTRVIAVVVP HHHHHHHHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]