| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094244
Identifier: 20094244
GI number: 20094244
Start: 768031
End: 768816
Strand: Direct
Name: 20094244
Synonym: MK0807
Alternate gene names: NA
Gene position: 768031-768816 (Clockwise)
Preceding gene: 20094241
Following gene: 20094246
Centisome position: 45.31
GC content: 63.1
Gene sequence:
>786_bases CTGATCACGTTGACCACGGACTTCGGGCTCGGTTCTCCGTATCCGGCCCAGGTTAAAGCTGTGATTCTCAGAATCGCGGC CCCAGGCGTCGATATCGTCGACGTAACCCACGAAGTCCCGGCACAGGACGTGGTGGCTGGTTCCTACGTGATGTCAGTCG CGTGTCCGTGGTTTCCACCGGGGTCCGTCCACGTGGGTGTGGTGGATCCCGGAGTGGGGACCGAGCGTAGGGCCGTCCTA CTGGAGGCGGAGCGCGGGGACTTCTTGGTGGGACCGGACAACGGCCTCCTGATACCTCTCGCCGAAGAGCTCGGTGGAAT CGTCCGGGCCTTTCGTATCCTCGAGGACGAAGTCTCGGACTGGGAAGTCTCCGCTACCTTCCACGGACGCGACGTATTCG CCCCAGCCGCCGCGCGAGTGGCGTCAGGTGAGAGTCCGGAGAGGTTCTGTGAACCCCTAGACCCAGAGGAACTAGTCGAG CCACCGATCGCCGAACCTGAAGTGGACGACGGCCACGTGCGTGCCCAGGTGTGGTTCGTGGATGACTTCGGGAACATCAT CACGAACGTCCTGTACGACGAGGTGGACCTGCCCGAGACCGTGACGATCCGCGTCTCCGGGGAATCCTTCGAGGCTAGGC ACGTCCACACGTATGGGGAGGCGGACTCCGGTGATCTGGTTGTCCTACGGTCTTCCTCCGACCACCTGGAAATCGCGGTC GTAGAGGGGAGCGCTGCCGAACTGCTCGGCGTCTCGACGGCCGACCGGCTCGAGATTCTCTACTGA
Upstream 100 bases:
>100_bases AGTATACTGGGTTCATGAGGTCCGCGGACCCTGGAACCGCTGCGATCGATAGAATAAGTGCGACGATTGTGATCCGTTGC AAGGGGAGCTCCCCTTGCGT
Downstream 100 bases:
>100_bases CCGTGCGGAAGCGGACCGCGCGGGGTTCCCCGGTGCGGATTAATCCCGTCGCACCTCTGTTACGGCCTCGGGCTCAGCCG CCCACGGGTTTCTGAGGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MITLTTDFGLGSPYPAQVKAVILRIAAPGVDIVDVTHEVPAQDVVAGSYVMSVACPWFPPGSVHVGVVDPGVGTERRAVL LEAERGDFLVGPDNGLLIPLAEELGGIVRAFRILEDEVSDWEVSATFHGRDVFAPAAARVASGESPERFCEPLDPEELVE PPIAEPEVDDGHVRAQVWFVDDFGNIITNVLYDEVDLPETVTIRVSGESFEARHVHTYGEADSGDLVVLRSSSDHLEIAV VEGSAAELLGVSTADRLEILY
Sequences:
>Translated_261_residues MITLTTDFGLGSPYPAQVKAVILRIAAPGVDIVDVTHEVPAQDVVAGSYVMSVACPWFPPGSVHVGVVDPGVGTERRAVL LEAERGDFLVGPDNGLLIPLAEELGGIVRAFRILEDEVSDWEVSATFHGRDVFAPAAARVASGESPERFCEPLDPEELVE PPIAEPEVDDGHVRAQVWFVDDFGNIITNVLYDEVDLPETVTIRVSGESFEARHVHTYGEADSGDLVVLRSSSDHLEIAV VEGSAAELLGVSTADRLEILY >Mature_261_residues MITLTTDFGLGSPYPAQVKAVILRIAAPGVDIVDVTHEVPAQDVVAGSYVMSVACPWFPPGSVHVGVVDPGVGTERRAVL LEAERGDFLVGPDNGLLIPLAEELGGIVRAFRILEDEVSDWEVSATFHGRDVFAPAAARVASGESPERFCEPLDPEELVE PPIAEPEVDDGHVRAQVWFVDDFGNIITNVLYDEVDLPETVTIRVSGESFEARHVHTYGEADSGDLVVLRSSSDHLEIAV VEGSAAELLGVSTADRLEILY
Specific function: Unknown
COG id: COG1912
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002747 - InterPro: IPR023227 - InterPro: IPR023228 [H]
Pfam domain/function: PF01887 DUF62 [H]
EC number: NA
Molecular weight: Translated: 28023; Mature: 28023
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLTTDFGLGSPYPAQVKAVILRIAAPGVDIVDVTHEVPAQDVVAGSYVMSVACPWFPP CEEEEECCCCCCCCHHHHEEEEEEEECCCCEEEECCCCCCHHHHHHCEEEEEEECCCCCC GSVHVGVVDPGVGTERRAVLLEAERGDFLVGPDNGLLIPLAEELGGIVRAFRILEDEVSD CCEEEEEECCCCCCCCEEEEEEECCCCEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCCC WEVSATFHGRDVFAPAAARVASGESPERFCEPLDPEELVEPPIAEPEVDDGHVRAQVWFV EEEEEEECCCEEECCHHHHHCCCCCHHHHCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEE DDFGNIITNVLYDEVDLPETVTIRVSGESFEARHVHTYGEADSGDLVVLRSSSDHLEIAV CCHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEE VEGSAAELLGVSTADRLEILY EECCCHHEEECCCCCCEEEEC >Mature Secondary Structure MITLTTDFGLGSPYPAQVKAVILRIAAPGVDIVDVTHEVPAQDVVAGSYVMSVACPWFPP CEEEEECCCCCCCCHHHHEEEEEEEECCCCEEEECCCCCCHHHHHHCEEEEEEECCCCCC GSVHVGVVDPGVGTERRAVLLEAERGDFLVGPDNGLLIPLAEELGGIVRAFRILEDEVSD CCEEEEEECCCCCCCCEEEEEEECCCCEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCCC WEVSATFHGRDVFAPAAARVASGESPERFCEPLDPEELVEPPIAEPEVDDGHVRAQVWFV EEEEEEECCCEEECCHHHHHCCCCCHHHHCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEE DDFGNIITNVLYDEVDLPETVTIRVSGESFEARHVHTYGEADSGDLVVLRSSSDHLEIAV CCHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCEEEEE VEGSAAELLGVSTADRLEILY EECCCHHEEECCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]