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The map label for this gene is HypB_1

Identifier: 20094246

GI number: 20094246

Start: 771251

End: 771961

Strand: Direct

Name: HypB_1

Synonym: MK0810

Alternate gene names: NA

Gene position: 771251-771961 (Clockwise)

Preceding gene: 20094244

Following gene: 20094247

Centisome position: 45.5

GC content: 61.6

Gene sequence:

>711_bases
GTGAAGCTGGTAATAGTCTCGGGCACGCCCGGATCCGGTAAGACCGCCGTCATCCTCCACGCACTGGAACGACTACTCGA
CCAGTACAACCCCGCTGTCGTCAAAGTCGACTGTCTCCGCACCGACGACCATGAGGTGTACCGTGAGCGCTTAGGGATTC
CCGCCACCGACGCCCTAGCTAAGGACATGTGTCCCGACCACTTCGCAGCTTATAACCTCGAACACATGGTTCGCTGGGCC
GAAGAACACGGTGCGGACCTGCTCGTCGTGGAAACCGCGGGTCTCTGCCTCCGCTGCGCACCCTACGTCGATGCCTGTCT
TGGAGTCTGCGTCGCCGACGTCACCTTAGGTCCGAACTCCCCAGCCAAGGTCGGTCCCTTCCTGCAGACAGCCGACGTTG
TCTGCGTCAACAAGGGCGACCTGGTCTCCCAGGCCGAACGTGAGGTCTACGTTCGGAAGGTGGCCGAGGTGAATCCAGAC
TGTCGGGTCATCGAAACCAACGGACTCACCGGAGCCGGCTGTGAACTACTAGCTCGACTGATCGAAGAGGAAGCCCCCGA
GCTGCCCGATACCCTCGACGAAGTCAGACTCCGTGAGAAGGCTCCGCTCGCCGTCTGCACGCTCTGCGTGGGCGAGACAC
GGGTTGCCGAGCGTTACCACCGTGGGGTGCTCAGGCGCATTGACGGATTCACGGAGTACCGAGGTGAGTAA

Upstream 100 bases:

>100_bases
AGCTCCTCGAGCGCGTGGACACGTGGCTCCTCGACCTCCGAAACCGCGTCCGCTGTGGTGAGCGCCTGGACGATGTCGAA
CCACCTGCGGGGATCGAGAC

Downstream 100 bases:

>100_bases
GCTCGTCGAACTGCTTCCTGGGTTCCACTGTGGAGCCTGCGGGTACGACCGATGCGATGACTTCGCCGAGGCACTGGTCC
GCGGGGAGGCCAAGCTTGAC

Product: Ni2+-binding GTPase involved in regulation of expression and maturation of hydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKLVIVSGTPGSGKTAVILHALERLLDQYNPAVVKVDCLRTDDHEVYRERLGIPATDALAKDMCPDHFAAYNLEHMVRWA
EEHGADLLVVETAGLCLRCAPYVDACLGVCVADVTLGPNSPAKVGPFLQTADVVCVNKGDLVSQAEREVYVRKVAEVNPD
CRVIETNGLTGAGCELLARLIEEEAPELPDTLDEVRLREKAPLAVCTLCVGETRVAERYHRGVLRRIDGFTEYRGE

Sequences:

>Translated_236_residues
MKLVIVSGTPGSGKTAVILHALERLLDQYNPAVVKVDCLRTDDHEVYRERLGIPATDALAKDMCPDHFAAYNLEHMVRWA
EEHGADLLVVETAGLCLRCAPYVDACLGVCVADVTLGPNSPAKVGPFLQTADVVCVNKGDLVSQAEREVYVRKVAEVNPD
CRVIETNGLTGAGCELLARLIEEEAPELPDTLDEVRLREKAPLAVCTLCVGETRVAERYHRGVLRRIDGFTEYRGE
>Mature_236_residues
MKLVIVSGTPGSGKTAVILHALERLLDQYNPAVVKVDCLRTDDHEVYRERLGIPATDALAKDMCPDHFAAYNLEHMVRWA
EEHGADLLVVETAGLCLRCAPYVDACLGVCVADVTLGPNSPAKVGPFLQTADVVCVNKGDLVSQAEREVYVRKVAEVNPD
CRVIETNGLTGAGCELLARLIEEEAPELPDTLDEVRLREKAPLAVCTLCVGETRVAERYHRGVLRRIDGFTEYRGE

Specific function: Unknown

COG id: COG0378

COG function: function code OK; Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR012202 [H]

Pfam domain/function: PF02492 cobW [H]

EC number: NA

Molecular weight: Translated: 25840; Mature: 25840

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVIVSGTPGSGKTAVILHALERLLDQYNPAVVKVDCLRTDDHEVYRERLGIPATDALA
CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHCCCCCHHHHH
KDMCPDHFAAYNLEHMVRWAEEHGADLLVVETAGLCLRCAPYVDACLGVCVADVTLGPNS
HHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCC
PAKVGPFLQTADVVCVNKGDLVSQAEREVYVRKVAEVNPDCRVIETNGLTGAGCELLARL
CCCCCCCHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH
IEEEAPELPDTLDEVRLREKAPLAVCTLCVGETRVAERYHRGVLRRIDGFTEYRGE
HHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCC
>Mature Secondary Structure
MKLVIVSGTPGSGKTAVILHALERLLDQYNPAVVKVDCLRTDDHEVYRERLGIPATDALA
CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHCCCCCHHHHH
KDMCPDHFAAYNLEHMVRWAEEHGADLLVVETAGLCLRCAPYVDACLGVCVADVTLGPNS
HHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCC
PAKVGPFLQTADVVCVNKGDLVSQAEREVYVRKVAEVNPDCRVIETNGLTGAGCELLARL
CCCCCCCHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH
IEEEAPELPDTLDEVRLREKAPLAVCTLCVGETRVAERYHRGVLRRIDGFTEYRGE
HHHHCCCCCCHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]