| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094185
Identifier: 20094185
GI number: 20094185
Start: 709231
End: 709587
Strand: Direct
Name: 20094185
Synonym: MK0748
Alternate gene names: NA
Gene position: 709231-709587 (Clockwise)
Preceding gene: 20094184
Following gene: 20094197
Centisome position: 41.84
GC content: 54.62
Gene sequence:
>357_bases TTGGGTGAGGAGACTGGCGGTGACTATCACGTCGTGCTCGAGGCCGCGTGGATCGTGTACAACGTCGACGACGAGGACGA CGCTATCAACATCGCCATTGCCGAGGCGGGTAAGCGCTTGAACCGACACGGCCTCGATTACGTGGATATCGATGTCGGGT TTTACGAGTGTCCTGAATGTGGTAATGAAATCGAAGGTGTGTGGATAGTAGCAGGTACAGCCCTCGTCCGACTGATTCTA TCGATGCGAGTGTTCAACGCGGAAAGCGAGGAACACGCCATTCGCATCGCTAAGTACGAGATCGGTCAAGCGCTGGAGGA TGTACCCTTAGGTGTCGTTGAAGTAACTCCGCTCTGA
Upstream 100 bases:
>100_bases GCAAGCTCTAATACTGCCCGCCTCCCGACTCCGTGAAGCGGAGCGCGAATACATCCGCCGCGTCCTCCCACACATCCGAG ATGTGCGTGGGGTCTAGCCT
Downstream 100 bases:
>100_bases CCATTTACTTACCCCTTACGAGATGCGCCCATATTAGCGCCGAGAGCAACGTGAACGTAGCCAAGGCGAAGGAGTTCATC GCCCTAGAGAACAGGAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MGEETGGDYHVVLEAAWIVYNVDDEDDAINIAIAEAGKRLNRHGLDYVDIDVGFYECPECGNEIEGVWIVAGTALVRLIL SMRVFNAESEEHAIRIAKYEIGQALEDVPLGVVEVTPL
Sequences:
>Translated_118_residues MGEETGGDYHVVLEAAWIVYNVDDEDDAINIAIAEAGKRLNRHGLDYVDIDVGFYECPECGNEIEGVWIVAGTALVRLIL SMRVFNAESEEHAIRIAKYEIGQALEDVPLGVVEVTPL >Mature_117_residues GEETGGDYHVVLEAAWIVYNVDDEDDAINIAIAEAGKRLNRHGLDYVDIDVGFYECPECGNEIEGVWIVAGTALVRLILS MRVFNAESEEHAIRIAKYEIGQALEDVPLGVVEVTPL
Specific function: Unknown
COG id: COG1885
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0212 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y748_METKA (Q8TXC6)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614032.1 - GeneID: 1476849 - GenomeReviews: AE009439_GR - KEGG: mka:MK0748 - NMPDR: fig|190192.1.peg.745 - HOGENOM: HBG497080 - OMA: AHFESAF - ProtClustDB: PRK03922 - BioCyc: MKAN190192:MK0748-MONOMER - HAMAP: MF_01223 - InterPro: IPR007564 - PIRSF: PIRSF016934 - ProDom: PD020367
Pfam domain/function: PF04475 DUF555
EC number: NA
Molecular weight: Translated: 12990; Mature: 12859
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEETGGDYHVVLEAAWIVYNVDDEDDAINIAIAEAGKRLNRHGLDYVDIDVGFYECPEC CCCCCCCCEEEEEEEEEEEEECCCCCCEEEEEEEHHCHHHHHCCCCEEEEECCEEECCCC GNEIEGVWIVAGTALVRLILSMRVFNAESEEHAIRIAKYEIGQALEDVPLGVVEVTPL CCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHEEEEEEEHHHHHHHHCCCCEEEEECC >Mature Secondary Structure GEETGGDYHVVLEAAWIVYNVDDEDDAINIAIAEAGKRLNRHGLDYVDIDVGFYECPEC CCCCCCCEEEEEEEEEEEEECCCCCCEEEEEEEHHCHHHHHCCCCEEEEECCEEECCCC GNEIEGVWIVAGTALVRLILSMRVFNAESEEHAIRIAKYEIGQALEDVPLGVVEVTPL CCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHEEEEEEEHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014