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The map label for this gene is CooC_2

Identifier: 20094163

GI number: 20094163

Start: 693907

End: 694650

Strand: Direct

Name: CooC_2

Synonym: MK0726

Alternate gene names: NA

Gene position: 693907-694650 (Clockwise)

Preceding gene: 20094162

Following gene: 20094164

Centisome position: 40.94

GC content: 64.25

Gene sequence:

>744_bases
GTGAAAGTGGGAGTCGTGGGTAAAGGGGGCGTCGGCAAGACCACCGTAGCCGCCGCTCTCGCCAAGGCTCTCACGGACGT
AGGGTACGAGGTGCTGGCCGTAGACGCCGATCCCGACCCCGACCTGGCTTACTCCTTGGGCCTCCCTGAATCACCCACTC
CGATCGTCGAACGGCGCGAGCTCGTCCGGGAACGTACGGGTGCGGAACCGGGCACGACCTACGGCCCTGTGTTCAAGGTC
AATCCGCGGGTCTCTGATCTCCCCGACGAGCTCGCCGTGAGGGTCGCGCCCGGTCTCCGACTCCTGGTGGTCGGAAGCGT
TGAGAACCCCGGTGAGGGTTGCTTCTGCCCGGCCGCCGCGTTGGCACGCAGGTTAATCCGTTACGTCATCGCCGACAGGG
ACGAGTCCGTAGTGGTGGACACCGACGCGGGTCTGGAGCACTTCGGAAGGAGGGTACTGGAGTCCGTCGACTGGGTAGTG
GTGGTGTGCGAACCCTCTGTTAAGTCCATGAAAAATGCCCGAGAGTCGGTGCGCCTCGCCCGTGAGATGGGGATCGAGAG
GGTAGCCCTCGTCAAGAACAAGTGGCGGGAGGACGCTCCGGAGCCCGATCTCGACGTCGACTTCGAGCTGACGGTCCCGT
ACTCCGACAAGCTCGTGGAGCTGGAGATGGAGGGGAGACCGGTATGGGAGGATCCGGTGGTGAGGAAGGCGGGAGAGGAG
CTGGCAAGACGTCTTACGAGGTAG

Upstream 100 bases:

>100_bases
TCGCAGGTCGCGGAGGAGAAACGCGAACGGTTCGCCATCGAGATGGAACGGATATACCGGACGCTCGCGAAGCTCGAATC
GGAGGAGGGGTCCCTTCGGG

Downstream 100 bases:

>100_bases
TAATCCGCGAGGAGCACTGCAAGGGATGCTTCCTCTGCTCCTGGGTCTGCCCGATCGACGCGCTGAAGAGGTCGAACCGG
AGGAACGAGCGCGGTTACCT

Product: CO dehydrogenase maturation factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKVGVVGKGGVGKTTVAAALAKALTDVGYEVLAVDADPDPDLAYSLGLPESPTPIVERRELVRERTGAEPGTTYGPVFKV
NPRVSDLPDELAVRVAPGLRLLVVGSVENPGEGCFCPAAALARRLIRYVIADRDESVVVDTDAGLEHFGRRVLESVDWVV
VVCEPSVKSMKNARESVRLAREMGIERVALVKNKWREDAPEPDLDVDFELTVPYSDKLVELEMEGRPVWEDPVVRKAGEE
LARRLTR

Sequences:

>Translated_247_residues
MKVGVVGKGGVGKTTVAAALAKALTDVGYEVLAVDADPDPDLAYSLGLPESPTPIVERRELVRERTGAEPGTTYGPVFKV
NPRVSDLPDELAVRVAPGLRLLVVGSVENPGEGCFCPAAALARRLIRYVIADRDESVVVDTDAGLEHFGRRVLESVDWVV
VVCEPSVKSMKNARESVRLAREMGIERVALVKNKWREDAPEPDLDVDFELTVPYSDKLVELEMEGRPVWEDPVVRKAGEE
LARRLTR
>Mature_247_residues
MKVGVVGKGGVGKTTVAAALAKALTDVGYEVLAVDADPDPDLAYSLGLPESPTPIVERRELVRERTGAEPGTTYGPVFKV
NPRVSDLPDELAVRVAPGLRLLVVGSVENPGEGCFCPAAALARRLIRYVIADRDESVVVDTDAGLEHFGRRVLESVDWVV
VVCEPSVKSMKNARESVRLAREMGIERVALVKNKWREDAPEPDLDVDFELTVPYSDKLVELEMEGRPVWEDPVVRKAGEE
LARRLTR

Specific function: Unknown

COG id: COG3640

COG function: function code D; CO dehydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0084 and MJ0685 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR014433 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 26995; Mature: 26995

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVGVVGKGGVGKTTVAAALAKALTDVGYEVLAVDADPDPDLAYSLGLPESPTPIVERRE
CEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEECCCCCCCCHHHHHHH
LVRERTGAEPGTTYGPVFKVNPRVSDLPDELAVRVAPGLRLLVVGSVENPGEGCFCPAAA
HHHHHCCCCCCCCCCCEEEECCCCCCCCHHHHEEECCCEEEEEEECCCCCCCCCCCCHHH
LARRLIRYVIADRDESVVVDTDAGLEHFGRRVLESVDWVVVVCEPSVKSMKNARESVRLA
HHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHH
REMGIERVALVKNKWREDAPEPDLDVDFELTVPYSDKLVELEMEGRPVWEDPVVRKAGEE
HHHCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHH
LARRLTR
HHHHHCC
>Mature Secondary Structure
MKVGVVGKGGVGKTTVAAALAKALTDVGYEVLAVDADPDPDLAYSLGLPESPTPIVERRE
CEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCEEECCCCCCCCHHHHHHH
LVRERTGAEPGTTYGPVFKVNPRVSDLPDELAVRVAPGLRLLVVGSVENPGEGCFCPAAA
HHHHHCCCCCCCCCCCEEEECCCCCCCCHHHHEEECCCEEEEEEECCCCCCCCCCCCHHH
LARRLIRYVIADRDESVVVDTDAGLEHFGRRVLESVDWVVVVCEPSVKSMKNARESVRLA
HHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHH
REMGIERVALVKNKWREDAPEPDLDVDFELTVPYSDKLVELEMEGRPVWEDPVVRKAGEE
HHHCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHH
LARRLTR
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]