| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is CdhA_1
Identifier: 20094156
GI number: 20094156
Start: 685725
End: 687623
Strand: Direct
Name: CdhA_1
Synonym: MK0719
Alternate gene names: 20094156
Gene position: 685725-687623 (Clockwise)
Preceding gene: 20094155
Following gene: 20094157
Centisome position: 40.46
GC content: 62.35
Gene sequence:
>1899_bases TTGGGCATAGAATGGGAGGGAGTCAAAGTCGAGATAGGAGAGCTCGTGGTGGAAGGAGACTCCGAAAGTGAGATGGAGGG GCCGACCCGCCGCGAGTTGCTCCCGTGGGATCGGACGTTGGCGTCGGTCTACGACCTGGCCGTGGTTCCCGGTGATTCGG AAGAGGAGCGACGAGAGGTAGCTCGTACGATAGTAACGCTCTGTTGCGAGGGGACGGCAGGGCTCATCTCCACGGCCCGA CTCGTGGTGGAACTGCTGCGTCAAACGGGGGAGAACCTGGACCCTGGATTCGACGCGGAGACGCCGCTCCCCCTCTACGA GACGCTACTGGGGAGTTCCCCCGAGTGTGCAGATGACCTCGAGGCCGGATTATCCTACGCGGAGCGGGAACTAACGTCCT CGGTTTCGGAGCTCCTGCGGTCGCATTCCCTAAAGGGTTACGAGTCCGTGGCCATGCACGCCGGTGCGATCGGTCTCCTC GCGATGGAGATAGCCGATGCGACCCCCTCCACGCTGATGGAGGTCACGGAGTCGGAGGAAGTGTTTGAGATCGGGACGGA TGATCTGCCGAGACGTCCCACGGTGTTACTGGTCGGTCATCTACCGCTCTTGGGGCACATCATCACCGAAGAGCTAGGAA CGCTCGCGAGACAGGTGGAGCTCGTCGGACTAACACACACCGCGTGGCCTAACCGAGAGGACCACGTCAGGGTCGTAGGT CCCCTGTCTATGTACCATGAATACCTCTCTTCCGGGTTCGCGGATGTGGTAGTGGTCGACGGGGCGTGTCCGGGAGAAGA CGTGATCGAAGCGGCACGTGAGGGCGGATCCAAGCTCGTCGCCACCGTCGGGGCCCGCGTGGCGGACCTACTCGACGTCA CCGACTACCCGGTTGAGGAGGCGGTCGAAGTCCTCGTCACCGAGGAGGACGCCGTTTACGTGGAGGAACCCATCAAGGCC GTGGAAATCGCCGCGTGGGCGGCGCTTCGAGTCGAGGGATCGCGCGACCGAAGAGAACCTCCTCGGAGGGCTTTCCGGGT CGGCCCGCCGACTCGCCTCACGGACGTAGTGATCCGAAACGTAGGTGTTCCGGTAGTAGCCGGCAACATTCCGGGAATCG TCGTCTTGGTATCCTGCCCCGAGAAATCCGCGGACGTCGAAGAGCCCGCCAAGATCGCCGAAGTCCTCCTGGAGCGCGGG TACCTCGTGCTGGTTCCGGGTTGTCTAGCCGTCGCGCTAGGTTCGTACCTGGACGACGATGGTAAAACTCTGTACGAACG GTACCCCGACACGCTTCTCAACACCGGTCCCTGTACCTCCGCCGCGCACTTAGTCGGGGCTTGCATCCGTGTGGGGGTCA TCTTCGGTAAGCTCCCTATCAGAGGGGAGTTCGTGCGGGTCGCCGATTACGTACTCAACCGGGTCGGGGCTTGCGTAATA GCCTGGGGTGGCGAGTACTCGGAACACCTGGTTTCGGCCGCCTACGGGGTCACTCGATGGGGTATTCCGGTGGTACTGGG TCCCGACCCGGAGGCTGGTTCGTTGTTGGTCGAGAAGAACCCGAAGGTTATCGACGCTTGCTCGGGAGAGGAGGTGGAGG ATCCCACCCCGGAGCACCTGAGGTGCGTGGTTTCGGATTGGAAGGAGGCGGCGATCACAGCCGCGCGGCTTTGTATGCGT CCCAACGATACCCCGGAAGGCCGCCAGAACAAGGTCGAGTCGTACGTCGAGCTGTACCGGGAGTTGTACGGAGAATTACC CCCCGATCTTGACCTGCTCATCCGGGATGAGAGCGATATCCCGGTGACGCTCAGGTCCGAGATACGGGAGCTGCTGGAGG AGACCGGGTGGACACCTAGATCGCGCGCATCCGATCCTACCCTACTACCCGAGGGGTGA
Upstream 100 bases:
>100_bases CCCGAGTACTGTCCCAGCGCAGATTACTCGCTACCTACAGTGAAGAGGGATCAGTTCCTCCAAGAGTTGAAGGCTTTAGT GGGAATCTAGGGGTGAGAAG
Downstream 100 bases:
>100_bases ATGTAACATTGACGAGTCTTGCGGATCTACCCGTGGACGTGAGCCCGAGGCACGAGGGCGAGCGGATACGAAGCGGCGAC ATGTACGTCGAGCTAGCGGG
Product: acetyl-CoA decarbonylase/synthase complex subunit alpha
Products: CO2; AH2
Alternate protein names: NA
Number of amino acids: Translated: 632; Mature: 631
Protein sequence:
>632_residues MGIEWEGVKVEIGELVVEGDSESEMEGPTRRELLPWDRTLASVYDLAVVPGDSEEERREVARTIVTLCCEGTAGLISTAR LVVELLRQTGENLDPGFDAETPLPLYETLLGSSPECADDLEAGLSYAERELTSSVSELLRSHSLKGYESVAMHAGAIGLL AMEIADATPSTLMEVTESEEVFEIGTDDLPRRPTVLLVGHLPLLGHIITEELGTLARQVELVGLTHTAWPNREDHVRVVG PLSMYHEYLSSGFADVVVVDGACPGEDVIEAAREGGSKLVATVGARVADLLDVTDYPVEEAVEVLVTEEDAVYVEEPIKA VEIAAWAALRVEGSRDRREPPRRAFRVGPPTRLTDVVIRNVGVPVVAGNIPGIVVLVSCPEKSADVEEPAKIAEVLLERG YLVLVPGCLAVALGSYLDDDGKTLYERYPDTLLNTGPCTSAAHLVGACIRVGVIFGKLPIRGEFVRVADYVLNRVGACVI AWGGEYSEHLVSAAYGVTRWGIPVVLGPDPEAGSLLVEKNPKVIDACSGEEVEDPTPEHLRCVVSDWKEAAITAARLCMR PNDTPEGRQNKVESYVELYRELYGELPPDLDLLIRDESDIPVTLRSEIRELLEETGWTPRSRASDPTLLPEG
Sequences:
>Translated_632_residues MGIEWEGVKVEIGELVVEGDSESEMEGPTRRELLPWDRTLASVYDLAVVPGDSEEERREVARTIVTLCCEGTAGLISTAR LVVELLRQTGENLDPGFDAETPLPLYETLLGSSPECADDLEAGLSYAERELTSSVSELLRSHSLKGYESVAMHAGAIGLL AMEIADATPSTLMEVTESEEVFEIGTDDLPRRPTVLLVGHLPLLGHIITEELGTLARQVELVGLTHTAWPNREDHVRVVG PLSMYHEYLSSGFADVVVVDGACPGEDVIEAAREGGSKLVATVGARVADLLDVTDYPVEEAVEVLVTEEDAVYVEEPIKA VEIAAWAALRVEGSRDRREPPRRAFRVGPPTRLTDVVIRNVGVPVVAGNIPGIVVLVSCPEKSADVEEPAKIAEVLLERG YLVLVPGCLAVALGSYLDDDGKTLYERYPDTLLNTGPCTSAAHLVGACIRVGVIFGKLPIRGEFVRVADYVLNRVGACVI AWGGEYSEHLVSAAYGVTRWGIPVVLGPDPEAGSLLVEKNPKVIDACSGEEVEDPTPEHLRCVVSDWKEAAITAARLCMR PNDTPEGRQNKVESYVELYRELYGELPPDLDLLIRDESDIPVTLRSEIRELLEETGWTPRSRASDPTLLPEG >Mature_631_residues GIEWEGVKVEIGELVVEGDSESEMEGPTRRELLPWDRTLASVYDLAVVPGDSEEERREVARTIVTLCCEGTAGLISTARL VVELLRQTGENLDPGFDAETPLPLYETLLGSSPECADDLEAGLSYAERELTSSVSELLRSHSLKGYESVAMHAGAIGLLA MEIADATPSTLMEVTESEEVFEIGTDDLPRRPTVLLVGHLPLLGHIITEELGTLARQVELVGLTHTAWPNREDHVRVVGP LSMYHEYLSSGFADVVVVDGACPGEDVIEAAREGGSKLVATVGARVADLLDVTDYPVEEAVEVLVTEEDAVYVEEPIKAV EIAAWAALRVEGSRDRREPPRRAFRVGPPTRLTDVVIRNVGVPVVAGNIPGIVVLVSCPEKSADVEEPAKIAEVLLERGY LVLVPGCLAVALGSYLDDDGKTLYERYPDTLLNTGPCTSAAHLVGACIRVGVIFGKLPIRGEFVRVADYVLNRVGACVIA WGGEYSEHLVSAAYGVTRWGIPVVLGPDPEAGSLLVEKNPKVIDACSGEEVEDPTPEHLRCVVSDWKEAAITAARLCMRP NDTPEGRQNKVESYVELYRELYGELPPDLDLLIRDESDIPVTLRSEIRELLEETGWTPRSRASDPTLLPEG
Specific function: Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2)
COG id: COG1152
COG function: function code C; CO dehydrogenase/acetyl-CoA synthase alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ni-containing carbon monoxide dehydrogenase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACDA2_METKA (Q8TXF5)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614003.1 - ProteinModelPortal: Q8TXF5 - SMR: Q8TXF5 - GeneID: 1476820 - GenomeReviews: AE009439_GR - KEGG: mka:MK0719 - NMPDR: fig|190192.1.peg.716 - HOGENOM: HBG539676 - BioCyc: MKAN190192:MK0719-MONOMER - GO: GO:0005737 - HAMAP: MF_01137 - InterPro: IPR004137 - InterPro: IPR011254 - InterPro: IPR016099 - Gene3D: G3DSA:3.40.50.2030
Pfam domain/function: PF03063 Prismane; SSF56821 Prismane_like
EC number: 1.2.99.2
Molecular weight: Translated: 68559; Mature: 68428
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIEWEGVKVEIGELVVEGDSESEMEGPTRRELLPWDRTLASVYDLAVVPGDSEEERREV CCCCCCCCEEEEEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHEECCCCCHHHHHHH ARTIVTLCCEGTAGLISTARLVVELLRQTGENLDPGFDAETPLPLYETLLGSSPECADDL HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHH EAGLSYAERELTSSVSELLRSHSLKGYESVAMHAGAIGLLAMEIADATPSTLMEVTESEE HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHCCCH VFEIGTDDLPRRPTVLLVGHLPLLGHIITEELGTLARQVELVGLTHTAWPNREDHVRVVG HEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEC PLSMYHEYLSSGFADVVVVDGACPGEDVIEAAREGGSKLVATVGARVADLLDVTDYPVEE CHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH AVEVLVTEEDAVYVEEPIKAVEIAAWAALRVEGSRDRREPPRRAFRVGPPTRLTDVVIRN HHHHHCCCCCCEEHHCCHHHHHHHHHHEEEECCCCCCCCCCHHHEECCCCHHHHHHHHHH VGVPVVAGNIPGIVVLVSCPEKSADVEEPAKIAEVLLERGYLVLVPGCLAVALGSYLDDD CCCCEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCC GKTLYERYPDTLLNTGPCTSAAHLVGACIRVGVIFGKLPIRGEFVRVADYVLNRVGACVI CHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEEEE AWGGEYSEHLVSAAYGVTRWGIPVVLGPDPEAGSLLVEKNPKVIDACSGEEVEDPTPEHL EECCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCCEEECCCCCCCCCCCHHHH RCVVSDWKEAAITAARLCMRPNDTPEGRQNKVESYVELYRELYGELPPDLDLLIRDESDI HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC PVTLRSEIRELLEETGWTPRSRASDPTLLPEG CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GIEWEGVKVEIGELVVEGDSESEMEGPTRRELLPWDRTLASVYDLAVVPGDSEEERREV CCCCCCCEEEEEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHEECCCCCHHHHHHH ARTIVTLCCEGTAGLISTARLVVELLRQTGENLDPGFDAETPLPLYETLLGSSPECADDL HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHH EAGLSYAERELTSSVSELLRSHSLKGYESVAMHAGAIGLLAMEIADATPSTLMEVTESEE HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHCCCHHHHHHHHCCCH VFEIGTDDLPRRPTVLLVGHLPLLGHIITEELGTLARQVELVGLTHTAWPNREDHVRVVG HEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEC PLSMYHEYLSSGFADVVVVDGACPGEDVIEAAREGGSKLVATVGARVADLLDVTDYPVEE CHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHH AVEVLVTEEDAVYVEEPIKAVEIAAWAALRVEGSRDRREPPRRAFRVGPPTRLTDVVIRN HHHHHCCCCCCEEHHCCHHHHHHHHHHEEEECCCCCCCCCCHHHEECCCCHHHHHHHHHH VGVPVVAGNIPGIVVLVSCPEKSADVEEPAKIAEVLLERGYLVLVPGCLAVALGSYLDDD CCCCEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCC GKTLYERYPDTLLNTGPCTSAAHLVGACIRVGVIFGKLPIRGEFVRVADYVLNRVGACVI CHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEEEE AWGGEYSEHLVSAAYGVTRWGIPVVLGPDPEAGSLLVEKNPKVIDACSGEEVEDPTPEHL EECCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEECCCCEEECCCCCCCCCCCHHHH RCVVSDWKEAAITAARLCMRPNDTPEGRQNKVESYVELYRELYGELPPDLDLLIRDESDI HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC PVTLRSEIRELLEETGWTPRSRASDPTLLPEG CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: CO; H2O; A
Specific reaction: CO + H2O + A = CO2 + AH2
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014