| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094023
Identifier: 20094023
GI number: 20094023
Start: 543481
End: 544767
Strand: Direct
Name: 20094023
Synonym: MK0585
Alternate gene names: NA
Gene position: 543481-544767 (Clockwise)
Preceding gene: 20094021
Following gene: 20094024
Centisome position: 32.06
GC content: 58.66
Gene sequence:
>1287_bases ATGAGCCGCGGCACCAAGGCCGGCATCTACCGAGATGTACTCGTTATTGAAGTTTTCCCCGGGGCGGTCCCCGACACGGG GACGCTCCGAGCCCTGAACGAGAGGGAGCGTAGGTTACTCCTAGCGGCAGCTGGATACGATGTCACTGAGTTCTGGGCTA GAAGTTTCATAGGACTGCTCTTCGACCATCCTACGCCCCTCGTTAGGGCATCCGAGAGACACGAGAAACTGTTACCGGAG GCGACGGTGGCGGCAGTCCGCGAGTTGTGCGATCGTATCGAACCCGAGAAGTTACGGAAGATCCGTAGCCGTGTGGCCTC CGGGGAGACCCCGAGGGAGGCCGTGCGTCGTGTCCTCGGATCCAAGATGGCCGGAGCCGTTTCCAGACTACTCGGTCGTG TTATGGGTTACGTACAGTCCGACCCGCTCTCCGTGGCCATCACCCTCCAGGTGTTAGGCACCATGATCGCAGCGGACAAA CGCCTAGAGGACGTGTCGACGGTTTTGGTCGTCGTCCCGGGCCTAGAGCACGTGCACATCGACGTATATCGACTGGCACG AAGGGTTTACTCTAACCTCGTGAGGGCGATGAAGTCCCTCAGACGCTACCTCAACCCTCGAGTTAGGGTGCGGGTGTACG TAGCCACGGGAGGTAAACTGGAACATCCAGCGGGAGATTCCCCCGAGGAGGAGCTGATCGAGGCGTACGAGGAGCTCTCA AGGAGGCCCACCGTGAGACGCTTCTTCCCGGAGCGTGGCCACTTCACCGAGGTACCTTGGGACCGAGCACTCGCTGAGTT TTTTGTGCGAGTTATCCGAAGGGAGCTCCACCGTAGGTCTCTGAAGGTAGTTCGGGCTGCGAAGCGGGAGGGTGCTTCGG GTAGAGAGCTGTCTGAAGTGTACGGCAGGGAGTACGGTAAGTGGTTGAGCAGGTGGTTCAAACGCGGTCGTCGATGGCTG AACTTTCACAGACCTAGTCCGGCACTCTCCGATATCTCCTGCTGCTTCGTAGCGTCAGAGGCGGGAGTAGAAGGATACCA TGAGGAGTTCTTGATAAAGGTACTCCAGAAGGTGTTGAGAGAAGTCGTCGAACGCAGGGTGACAGGACGACGGCTTGTGC GAAAAATAGTCAGGAAGATCGCCAGGGTCCTAAAGGAGGACTTCAGGGTCGAAGGGAAGATACGCGAAGGGATTCTCCAC ATGGCGAGGCTACTCGGTGGCAGACGCAAAGCCGCGTTAGGTGGCAAGACACTGCTCGAAGCGTTCGGGGCACCTCCACC GAGTTGA
Upstream 100 bases:
>100_bases CCGGTCGAGTTCATGGTCAGATCAACGCTCGCACAAATGAGAATGATTGGAAAGAGAGGGGGCGGGAAGGGAGGCTCCCA CCGGTCGGGGGTCAAGGCCC
Downstream 100 bases:
>100_bases GGGTATCTTCGGACGGTAACCCCACGATCGTGAGCGGCGGAGGTGCCGACAATTGTTACGATTTCAATAACATTTGAATA TCGCAACGAAAATTCTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MSRGTKAGIYRDVLVIEVFPGAVPDTGTLRALNERERRLLLAAAGYDVTEFWARSFIGLLFDHPTPLVRASERHEKLLPE ATVAAVRELCDRIEPEKLRKIRSRVASGETPREAVRRVLGSKMAGAVSRLLGRVMGYVQSDPLSVAITLQVLGTMIAADK RLEDVSTVLVVVPGLEHVHIDVYRLARRVYSNLVRAMKSLRRYLNPRVRVRVYVATGGKLEHPAGDSPEEELIEAYEELS RRPTVRRFFPERGHFTEVPWDRALAEFFVRVIRRELHRRSLKVVRAAKREGASGRELSEVYGREYGKWLSRWFKRGRRWL NFHRPSPALSDISCCFVASEAGVEGYHEEFLIKVLQKVLREVVERRVTGRRLVRKIVRKIARVLKEDFRVEGKIREGILH MARLLGGRRKAALGGKTLLEAFGAPPPS
Sequences:
>Translated_428_residues MSRGTKAGIYRDVLVIEVFPGAVPDTGTLRALNERERRLLLAAAGYDVTEFWARSFIGLLFDHPTPLVRASERHEKLLPE ATVAAVRELCDRIEPEKLRKIRSRVASGETPREAVRRVLGSKMAGAVSRLLGRVMGYVQSDPLSVAITLQVLGTMIAADK RLEDVSTVLVVVPGLEHVHIDVYRLARRVYSNLVRAMKSLRRYLNPRVRVRVYVATGGKLEHPAGDSPEEELIEAYEELS RRPTVRRFFPERGHFTEVPWDRALAEFFVRVIRRELHRRSLKVVRAAKREGASGRELSEVYGREYGKWLSRWFKRGRRWL NFHRPSPALSDISCCFVASEAGVEGYHEEFLIKVLQKVLREVVERRVTGRRLVRKIVRKIARVLKEDFRVEGKIREGILH MARLLGGRRKAALGGKTLLEAFGAPPPS >Mature_427_residues SRGTKAGIYRDVLVIEVFPGAVPDTGTLRALNERERRLLLAAAGYDVTEFWARSFIGLLFDHPTPLVRASERHEKLLPEA TVAAVRELCDRIEPEKLRKIRSRVASGETPREAVRRVLGSKMAGAVSRLLGRVMGYVQSDPLSVAITLQVLGTMIAADKR LEDVSTVLVVVPGLEHVHIDVYRLARRVYSNLVRAMKSLRRYLNPRVRVRVYVATGGKLEHPAGDSPEEELIEAYEELSR RPTVRRFFPERGHFTEVPWDRALAEFFVRVIRRELHRRSLKVVRAAKREGASGRELSEVYGREYGKWLSRWFKRGRRWLN FHRPSPALSDISCCFVASEAGVEGYHEEFLIKVLQKVLREVVERRVTGRRLVRKIVRKIARVLKEDFRVEGKIREGILHM ARLLGGRRKAALGGKTLLEAFGAPPPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48746; Mature: 48614
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRGTKAGIYRDVLVIEVFPGAVPDTGTLRALNERERRLLLAAAGYDVTEFWARSFIGLL CCCCCCCCHHHHEEEEEECCCCCCCCCHHHHHHHHHHEEEEHCCCCCHHHHHHHHHHHHH FDHPTPLVRASERHEKLLPEATVAAVRELCDRIEPEKLRKIRSRVASGETPREAVRRVLG HCCCCCHHHCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHH SKMAGAVSRLLGRVMGYVQSDPLSVAITLQVLGTMIAADKRLEDVSTVLVVVPGLEHVHI HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHH DVYRLARRVYSNLVRAMKSLRRYLNPRVRVRVYVATGGKLEHPAGDSPEEELIEAYEELS HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH RRPTVRRFFPERGHFTEVPWDRALAEFFVRVIRRELHRRSLKVVRAAKREGASGRELSEV CCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH YGREYGKWLSRWFKRGRRWLNFHRPSPALSDISCCFVASEAGVEGYHEEFLIKVLQKVLR HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHH EVVERRVTGRRLVRKIVRKIARVLKEDFRVEGKIREGILHMARLLGGRRKAALGGKTLLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCHHHHHH AFGAPPPS HHCCCCCC >Mature Secondary Structure SRGTKAGIYRDVLVIEVFPGAVPDTGTLRALNERERRLLLAAAGYDVTEFWARSFIGLL CCCCCCCHHHHEEEEEECCCCCCCCCHHHHHHHHHHEEEEHCCCCCHHHHHHHHHHHHH FDHPTPLVRASERHEKLLPEATVAAVRELCDRIEPEKLRKIRSRVASGETPREAVRRVLG HCCCCCHHHCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHH SKMAGAVSRLLGRVMGYVQSDPLSVAITLQVLGTMIAADKRLEDVSTVLVVVPGLEHVHI HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHH DVYRLARRVYSNLVRAMKSLRRYLNPRVRVRVYVATGGKLEHPAGDSPEEELIEAYEELS HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHH RRPTVRRFFPERGHFTEVPWDRALAEFFVRVIRRELHRRSLKVVRAAKREGASGRELSEV CCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH YGREYGKWLSRWFKRGRRWLNFHRPSPALSDISCCFVASEAGVEGYHEEFLIKVLQKVLR HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHH EVVERRVTGRRLVRKIVRKIARVLKEDFRVEGKIREGILHMARLLGGRRKAALGGKTLLE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCHHHHHH AFGAPPPS HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA