| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094017
Identifier: 20094017
GI number: 20094017
Start: 538169
End: 538615
Strand: Direct
Name: 20094017
Synonym: MK0579
Alternate gene names: NA
Gene position: 538169-538615 (Clockwise)
Preceding gene: 20094015
Following gene: 20094018
Centisome position: 31.75
GC content: 58.17
Gene sequence:
>447_bases GTGTTAGTATTGGCCCGGGTGTTCATTCACCCGCCTAACAGTCTGATTCTCCACGATCTGGTCGAGAGGTTCGGGCACGA GCCACTCTCACTGCCGAAAGAGATAAGCAAACGAGTGCGAGACCCAGAGATCGACTCACCCCCGATGAACGTAACCCCTC AGGACGCGAAGCGAGGTCTGAAGTACGCGGCCGTGGAGGTCCCTTCGGGTGTCAGGGGCAGGCTGGCCCTGATCGGTCCA CTCATAGAGAAGGCCGACGCCGCCATCGTAGTCACAGGCATCGAGGACTTCTCCTTCGGCTGCCTAGGCTGCGACAGAAC GAACGAGTTCGTGACGTACCTAGTTCGACGCCAAGGCATACCGGTGCTGGAGCTGGAGTACCCGAAATCGGAGGAAGAAG CGAAAGCGTTCGTCCGTGAAATCCGAGACTTCTTGGAGTCGTTGTAG
Upstream 100 bases:
>100_bases ACACACCTCCCGCCAGCACGCGCTTACCCACGTGAACGCTCCCCCGAGTGTGACCGAAGTTTGATTAACCCCGAACTACC GGGTGTCTTGACGGCGCGGG
Downstream 100 bases:
>100_bases GGGTGGTCCCGTTTGGCCGTCCAGATCGCTCAGCTCTCGTGTGGCACGGAGTATAGCGGTGTCCAACCCGAGATAGAGCG TGCGGCCGAACGAGTCGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MLVLARVFIHPPNSLILHDLVERFGHEPLSLPKEISKRVRDPEIDSPPMNVTPQDAKRGLKYAAVEVPSGVRGRLALIGP LIEKADAAIVVTGIEDFSFGCLGCDRTNEFVTYLVRRQGIPVLELEYPKSEEEAKAFVREIRDFLESL
Sequences:
>Translated_148_residues MLVLARVFIHPPNSLILHDLVERFGHEPLSLPKEISKRVRDPEIDSPPMNVTPQDAKRGLKYAAVEVPSGVRGRLALIGP LIEKADAAIVVTGIEDFSFGCLGCDRTNEFVTYLVRRQGIPVLELEYPKSEEEAKAFVREIRDFLESL >Mature_148_residues MLVLARVFIHPPNSLILHDLVERFGHEPLSLPKEISKRVRDPEIDSPPMNVTPQDAKRGLKYAAVEVPSGVRGRLALIGP LIEKADAAIVVTGIEDFSFGCLGCDRTNEFVTYLVRRQGIPVLELEYPKSEEEAKAFVREIRDFLESL
Specific function: Unknown
COG id: COG4050
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012356 [H]
Pfam domain/function: PF09885 DUF2112 [H]
EC number: NA
Molecular weight: Translated: 16579; Mature: 16579
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVLARVFIHPPNSLILHDLVERFGHEPLSLPKEISKRVRDPEIDSPPMNVTPQDAKRGL CEEEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHCCC KYAAVEVPSGVRGRLALIGPLIEKADAAIVVTGIEDFSFGCLGCDRTNEFVTYLVRRQGI EEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCHHHHHHHHHHHCCC PVLELEYPKSEEEAKAFVREIRDFLESL CEEEEECCCCHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MLVLARVFIHPPNSLILHDLVERFGHEPLSLPKEISKRVRDPEIDSPPMNVTPQDAKRGL CEEEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHCCC KYAAVEVPSGVRGRLALIGPLIEKADAAIVVTGIEDFSFGCLGCDRTNEFVTYLVRRQGI EEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCEECCCCCHHHHHHHHHHHCCC PVLELEYPKSEEEAKAFVREIRDFLESL CEEEEECCCCHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]