Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094015

Identifier: 20094015

GI number: 20094015

Start: 537359

End: 537568

Strand: Direct

Name: 20094015

Synonym: MK0577

Alternate gene names: NA

Gene position: 537359-537568 (Clockwise)

Preceding gene: 20094014

Following gene: 20094017

Centisome position: 31.7

GC content: 54.29

Gene sequence:

>210_bases
ATGTCCGAGGAGAGGAGACCGTTCAAAGCCGAGAAAGTCGAGACTAGGGACGGGGAGATACTCCTCAGATGCCCACGCTG
CGATGCGTTGTTCCGCGACCAGAAGTCGTACTCTAGGCACGTGAACAAGTCCCATTTGTACAAGAAGAACCGCCCGAAGC
GGATACTCAAGAAGATGAAGCGTCGCGGGGACGTGTTAGTTCAGGATTGA

Upstream 100 bases:

>100_bases
GAGAAAGTAAAAGAACTCGGGCTCGAGAACCTCAGGATAGTCTGTGAGGAGATCGAGAGGTGGTTTCGGGAGTTCACACC
GCACTGAGGGGGAAGACGAG

Downstream 100 bases:

>100_bases
CGCCAACCTGTGGATGGGGAACAGGCTGAGCGCCGAGGCCTCGGGCCCGTGACGAGAGAACCCGGAGCCGACTACATGCT
ACACACGTAACTCACCACGC

Product: nucleic-acid-binding protein containing an -type C2H2 Zn-finger

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MSEERRPFKAEKVETRDGEILLRCPRCDALFRDQKSYSRHVNKSHLYKKNRPKRILKKMKRRGDVLVQD

Sequences:

>Translated_69_residues
MSEERRPFKAEKVETRDGEILLRCPRCDALFRDQKSYSRHVNKSHLYKKNRPKRILKKMKRRGDVLVQD
>Mature_68_residues
SEERRPFKAEKVETRDGEILLRCPRCDALFRDQKSYSRHVNKSHLYKKNRPKRILKKMKRRGDVLVQD

Specific function: Unknown

COG id: COG4049

COG function: function code R; Uncharacterized protein containing archaeal-type C2H2 Zn-finger

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8386; Mature: 8255

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: PS00028 ZINC_FINGER_C2H2_1 ; PS50157 ZINC_FINGER_C2H2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEERRPFKAEKVETRDGEILLRCPRCDALFRDQKSYSRHVNKSHLYKKNRPKRILKKMK
CCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHH
RRGDVLVQD
HCCCEECCC
>Mature Secondary Structure 
SEERRPFKAEKVETRDGEILLRCPRCDALFRDQKSYSRHVNKSHLYKKNRPKRILKKMK
CCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHH
RRGDVLVQD
HCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA