| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094015
Identifier: 20094015
GI number: 20094015
Start: 537359
End: 537568
Strand: Direct
Name: 20094015
Synonym: MK0577
Alternate gene names: NA
Gene position: 537359-537568 (Clockwise)
Preceding gene: 20094014
Following gene: 20094017
Centisome position: 31.7
GC content: 54.29
Gene sequence:
>210_bases ATGTCCGAGGAGAGGAGACCGTTCAAAGCCGAGAAAGTCGAGACTAGGGACGGGGAGATACTCCTCAGATGCCCACGCTG CGATGCGTTGTTCCGCGACCAGAAGTCGTACTCTAGGCACGTGAACAAGTCCCATTTGTACAAGAAGAACCGCCCGAAGC GGATACTCAAGAAGATGAAGCGTCGCGGGGACGTGTTAGTTCAGGATTGA
Upstream 100 bases:
>100_bases GAGAAAGTAAAAGAACTCGGGCTCGAGAACCTCAGGATAGTCTGTGAGGAGATCGAGAGGTGGTTTCGGGAGTTCACACC GCACTGAGGGGGAAGACGAG
Downstream 100 bases:
>100_bases CGCCAACCTGTGGATGGGGAACAGGCTGAGCGCCGAGGCCTCGGGCCCGTGACGAGAGAACCCGGAGCCGACTACATGCT ACACACGTAACTCACCACGC
Product: nucleic-acid-binding protein containing an -type C2H2 Zn-finger
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MSEERRPFKAEKVETRDGEILLRCPRCDALFRDQKSYSRHVNKSHLYKKNRPKRILKKMKRRGDVLVQD
Sequences:
>Translated_69_residues MSEERRPFKAEKVETRDGEILLRCPRCDALFRDQKSYSRHVNKSHLYKKNRPKRILKKMKRRGDVLVQD >Mature_68_residues SEERRPFKAEKVETRDGEILLRCPRCDALFRDQKSYSRHVNKSHLYKKNRPKRILKKMKRRGDVLVQD
Specific function: Unknown
COG id: COG4049
COG function: function code R; Uncharacterized protein containing archaeal-type C2H2 Zn-finger
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8386; Mature: 8255
Theoretical pI: Translated: 10.97; Mature: 10.97
Prosite motif: PS00028 ZINC_FINGER_C2H2_1 ; PS50157 ZINC_FINGER_C2H2_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEERRPFKAEKVETRDGEILLRCPRCDALFRDQKSYSRHVNKSHLYKKNRPKRILKKMK CCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHH RRGDVLVQD HCCCEECCC >Mature Secondary Structure SEERRPFKAEKVETRDGEILLRCPRCDALFRDQKSYSRHVNKSHLYKKNRPKRILKKMK CCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHH RRGDVLVQD HCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA