| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094007
Identifier: 20094007
GI number: 20094007
Start: 531423
End: 532460
Strand: Direct
Name: 20094007
Synonym: MK0569
Alternate gene names: NA
Gene position: 531423-532460 (Clockwise)
Preceding gene: 20094006
Following gene: 20094009
Centisome position: 31.35
GC content: 62.33
Gene sequence:
>1038_bases TTGGAGTTACCGCATAAGCCCGGGACGCCCGCGATCATACTGTGTCACGGGGCGTTCGACGAACCTCATGGGAAGACAGC ACACGGACTGCTCCGGTTCGGACGCATTTACGACATCGTCGCCGTGATAGACCGCGAGCTGGCCGGGAAGACCGCACAGG ATGTGGATCCGGATTTCCCACCGGTGCCGATACTGCGGTCGGTGAGTGAGGCCTTAGAGGAGCTGGATCCGGAAGTGCTG CTGATCGGGGCGGCGCCGCCCGGTGGGAAGTTAACCCCGGAGTGGAAAGAGGAAATCATCGAAGCTGTCCAAGCGGGCCT GGATGTGGTGAGCGGGCTCCACGAGTTCCTCTCGAAGGATCCGGACATCAGCGAGGCGGCCGAAGAATCAGGCTCACGGC TGATAGACGTGAGGAAGCCTCGGAAGGAGTTGTTCCGAGTTGCGGACGGGTCGGCCAGGGACGTGGACGCCACGGTAGTG CTCACGGCGGGGACGGATTGCGCTGTGGGTAAGATGTCGGCGGCTATCGAGCTCGTGGAGCGTCTGAGGGAAGAGGGAGT AGAGGCCGCGTTCTTGGCGACAGGCCAGACCAGCATCATGATCGGGGCGGAAGACGGTGTCGTGGTGGATCGTATGCCCG GGGACTTCATGGCGGGGGCCATAGAGGAGCTGGTCGTCCGCCTGGCCGAGGACCATGAGATCGTCGTAGTAGAGGGACAG GGTGCGTTAAGCCACCCGGCGTATTCCGGGGTTACACTGGCTATCCTGCACGGCGCCTGGCCCGACGCCGTGGTGTTGGT GCACGACCCGGTTAGGGAGGTGCGGGATGGGTTCCCGAGGTTCCGAGTCCCCGACCCGCGCACCGAGGTGACGCTGATCG AGTCGTTAAGCGCGGCGGAAATAGTCTCGGTAGTTTTACGCACGTGGGACGAGAGGCTCGCGGAGAAGTTATCGTCCGAA GGATACCTGGTAGAACGTCTAGGCGACCTCAGAAGGACGGTAGATAGGGTTTTAGAGATTCACCGGATGGGGCGCTGA
Upstream 100 bases:
>100_bases ACTCCACTCCCTTAACGACTCACTCTTCGACACTTTAACTCGATAACCGTCGAGTGGGGGTAATCATCGAAGTGGAAAAC TCGTGACGGGAGGTGGTTCG
Downstream 100 bases:
>100_bases GTCACCTTCCTGAGCGAGGAGTAGATACCGTAAGTGAGGTCGACGACACCGAGGGCGGCGATAGTCTCACCCTCGTCCTT GATGGGTACAACTACGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MELPHKPGTPAIILCHGAFDEPHGKTAHGLLRFGRIYDIVAVIDRELAGKTAQDVDPDFPPVPILRSVSEALEELDPEVL LIGAAPPGGKLTPEWKEEIIEAVQAGLDVVSGLHEFLSKDPDISEAAEESGSRLIDVRKPRKELFRVADGSARDVDATVV LTAGTDCAVGKMSAAIELVERLREEGVEAAFLATGQTSIMIGAEDGVVVDRMPGDFMAGAIEELVVRLAEDHEIVVVEGQ GALSHPAYSGVTLAILHGAWPDAVVLVHDPVREVRDGFPRFRVPDPRTEVTLIESLSAAEIVSVVLRTWDERLAEKLSSE GYLVERLGDLRRTVDRVLEIHRMGR
Sequences:
>Translated_345_residues MELPHKPGTPAIILCHGAFDEPHGKTAHGLLRFGRIYDIVAVIDRELAGKTAQDVDPDFPPVPILRSVSEALEELDPEVL LIGAAPPGGKLTPEWKEEIIEAVQAGLDVVSGLHEFLSKDPDISEAAEESGSRLIDVRKPRKELFRVADGSARDVDATVV LTAGTDCAVGKMSAAIELVERLREEGVEAAFLATGQTSIMIGAEDGVVVDRMPGDFMAGAIEELVVRLAEDHEIVVVEGQ GALSHPAYSGVTLAILHGAWPDAVVLVHDPVREVRDGFPRFRVPDPRTEVTLIESLSAAEIVSVVLRTWDERLAEKLSSE GYLVERLGDLRRTVDRVLEIHRMGR >Mature_345_residues MELPHKPGTPAIILCHGAFDEPHGKTAHGLLRFGRIYDIVAVIDRELAGKTAQDVDPDFPPVPILRSVSEALEELDPEVL LIGAAPPGGKLTPEWKEEIIEAVQAGLDVVSGLHEFLSKDPDISEAAEESGSRLIDVRKPRKELFRVADGSARDVDATVV LTAGTDCAVGKMSAAIELVERLREEGVEAAFLATGQTSIMIGAEDGVVVDRMPGDFMAGAIEELVVRLAEDHEIVVVEGQ GALSHPAYSGVTLAILHGAWPDAVVLVHDPVREVRDGFPRFRVPDPRTEVTLIESLSAAEIVSVVLRTWDERLAEKLSSE GYLVERLGDLRRTVDRVLEIHRMGR
Specific function: Unknown
COG id: COG3367
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37419; Mature: 37419
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELPHKPGTPAIILCHGAFDEPHGKTAHGLLRFGRIYDIVAVIDRELAGKTAQDVDPDFP CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PVPILRSVSEALEELDPEVLLIGAAPPGGKLTPEWKEEIIEAVQAGLDVVSGLHEFLSKD CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PDISEAAEESGSRLIDVRKPRKELFRVADGSARDVDATVVLTAGTDCAVGKMSAAIELVE CCHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH RLREEGVEAAFLATGQTSIMIGAEDGVVVDRMPGDFMAGAIEELVVRLAEDHEIVVVEGQ HHHHCCCCEEEEECCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECC GALSHPAYSGVTLAILHGAWPDAVVLVHDPVREVRDGFPRFRVPDPRTEVTLIESLSAAE CCCCCCCCCCEEEEEEECCCCCEEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHHCCHHH IVSVVLRTWDERLAEKLSSEGYLVERLGDLRRTVDRVLEIHRMGR HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MELPHKPGTPAIILCHGAFDEPHGKTAHGLLRFGRIYDIVAVIDRELAGKTAQDVDPDFP CCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PVPILRSVSEALEELDPEVLLIGAAPPGGKLTPEWKEEIIEAVQAGLDVVSGLHEFLSKD CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PDISEAAEESGSRLIDVRKPRKELFRVADGSARDVDATVVLTAGTDCAVGKMSAAIELVE CCHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH RLREEGVEAAFLATGQTSIMIGAEDGVVVDRMPGDFMAGAIEELVVRLAEDHEIVVVEGQ HHHHCCCCEEEEECCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECC GALSHPAYSGVTLAILHGAWPDAVVLVHDPVREVRDGFPRFRVPDPRTEVTLIESLSAAE CCCCCCCCCCEEEEEEECCCCCEEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHHCCHHH IVSVVLRTWDERLAEKLSSEGYLVERLGDLRRTVDRVLEIHRMGR HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA