| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is ycjG [C]
Identifier: 20094006
GI number: 20094006
Start: 530382
End: 531287
Strand: Direct
Name: ycjG [C]
Synonym: MK0568
Alternate gene names: 20094006
Gene position: 530382-531287 (Clockwise)
Preceding gene: 20094004
Following gene: 20094007
Centisome position: 31.29
GC content: 60.38
Gene sequence:
>906_bases TTGGGTTCGCTGGAGACGGAGCCCGTATCGTTATCTCTCAAGCGGCCGTTCCGGATATCGGGCCGGGAAGTTAGACGAGT GCGGGGTTATTGGTGCACGTGCGTCATCGAGGGCAACTCCGGGAGAGGATTCGGACTCCGTCGCGGTATCGCCGAGGAGA TGGCGACACTGGACGCCGTAGCTAGGAGGTATGACGAGCCACTGTGCAGGGTCTGGGGAAGGGAGCCGGCCTCGATCGAG TCGTTCGCCACCGTGGATCTGGTGGGCGCAGAGCAGGCCGAGAAGCTCGCGCGACGTTACTACCTCAGAGGGTATCGGAA ACTGAAGGTGAAGGTGGGCGGAGATGACCTGAAGCGGGATCTGGAGCGTGTCGAGGCCTGCGTGAAGTCCGCCGAGTTCG ACGCCCTCATACTGGACGGAAACGAGGGACTGACGGTCGAAGAAGTATTCCGGTTGCTAGATTTCCTGGACTTCGACGGT GACGTGTACCTCGAACATCCGACACCACCCGATAGCCTGGAAGAAGTGTGCGAATCTTGCGAGGCACCCGTGATCGTGGA TGTAATGGATTTGGGAGCCCGATCCATCGACGACGTCCTCGACGTCGCGGAACCCTGCGATATCGTGAACATCAAGACAC AGGAGGTAGGATTCGTCGGTGGTTTGAGGTTAGCCCGAGACGCCCGGGAAGAGGGTTTCAAAGTGATGGTAGGATGTGCC GTCGAGAGCTTCTCTTCCATATCTGCCGCCGCTCACTTAGCCGCCGCCGTGGAGGCCGACTTATGCGACCTCGATGGCCA CCTGTTCCTGGACGAGGATGTCGTGAGCAACCCCGGATACGCACCCGTGATGGTCACCGAGGGTCCCGGATGGGAAGTCC GCGTGGAGCGGCCTAAGCCCGCGTAA
Upstream 100 bases:
>100_bases CCAGCAGCGCCTCAAGCACGAACTCGGCCACTTCAGCGATCAACCGGTTTCCCCCGAGGACTTTAACGGCGGAGACGGTG CGTGGTACCGGGGCGTCACG
Downstream 100 bases:
>100_bases TAGGACATGAGCTGATGGCTGGAGGTCGTTAGGACACTCCACTCCCTTAACGACTCACTCTTCGACACTTTAACTCGATA ACCGTCGAGTGGGGGTAATC
Product: O-succinylbenzoate synthase-like protein
Products: NA
Alternate protein names: AE epimerase; AEE [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MGSLETEPVSLSLKRPFRISGREVRRVRGYWCTCVIEGNSGRGFGLRRGIAEEMATLDAVARRYDEPLCRVWGREPASIE SFATVDLVGAEQAEKLARRYYLRGYRKLKVKVGGDDLKRDLERVEACVKSAEFDALILDGNEGLTVEEVFRLLDFLDFDG DVYLEHPTPPDSLEEVCESCEAPVIVDVMDLGARSIDDVLDVAEPCDIVNIKTQEVGFVGGLRLARDAREEGFKVMVGCA VESFSSISAAAHLAAAVEADLCDLDGHLFLDEDVVSNPGYAPVMVTEGPGWEVRVERPKPA
Sequences:
>Translated_301_residues MGSLETEPVSLSLKRPFRISGREVRRVRGYWCTCVIEGNSGRGFGLRRGIAEEMATLDAVARRYDEPLCRVWGREPASIE SFATVDLVGAEQAEKLARRYYLRGYRKLKVKVGGDDLKRDLERVEACVKSAEFDALILDGNEGLTVEEVFRLLDFLDFDG DVYLEHPTPPDSLEEVCESCEAPVIVDVMDLGARSIDDVLDVAEPCDIVNIKTQEVGFVGGLRLARDAREEGFKVMVGCA VESFSSISAAAHLAAAVEADLCDLDGHLFLDEDVVSNPGYAPVMVTEGPGWEVRVERPKPA >Mature_300_residues GSLETEPVSLSLKRPFRISGREVRRVRGYWCTCVIEGNSGRGFGLRRGIAEEMATLDAVARRYDEPLCRVWGREPASIES FATVDLVGAEQAEKLARRYYLRGYRKLKVKVGGDDLKRDLERVEACVKSAEFDALILDGNEGLTVEEVFRLLDFLDFDGD VYLEHPTPPDSLEEVCESCEAPVIVDVMDLGARSIDDVLDVAEPCDIVNIKTQEVGFVGGLRLARDAREEGFKVMVGCAV ESFSSISAAAHLAAAVEADLCDLDGHLFLDEDVVSNPGYAPVMVTEGPGWEVRVERPKPA
Specific function: Catalyzes the epimerization of L-Ala-D-Glu to L-Ala-L- Glu and has probably a role in the metabolism of the murein peptide, of which L-Ala-D-Glu is a component. Is also able to catalyze the reverse reaction and the epimerization of a broad range of other
COG id: COG4948
COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013342 - InterPro: IPR013341 - InterPro: IPR001354 [H]
Pfam domain/function: PF01188 MR_MLE; PF02746 MR_MLE_N [H]
EC number: NA
Molecular weight: Translated: 33146; Mature: 33015
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSLETEPVSLSLKRPFRISGREVRRVRGYWCTCVIEGNSGRGFGLRRGIAEEMATLDAV CCCCCCCCEEEEECCCCCCCCHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH ARRYDEPLCRVWGREPASIESFATVDLVGAEQAEKLARRYYLRGYRKLKVKVGGDDLKRD HHHHCCHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEEECCHHHHHH LERVEACVKSAEFDALILDGNEGLTVEEVFRLLDFLDFDGDVYLEHPTPPDSLEEVCESC HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHC EAPVIVDVMDLGARSIDDVLDVAEPCDIVNIKTQEVGFVGGLRLARDAREEGFKVMVGCA CCCEEEEHHHCCCCHHHHHHHHCCCCCEEEEEHHHCCCHHHHHHHHHHHHCCCEEEEEHH VESFSSISAAAHLAAAVEADLCDLDGHLFLDEDVVSNPGYAPVMVTEGPGWEVRVERPKP HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHCCCCCCEEEEECCCCCEEEECCCCC A C >Mature Secondary Structure GSLETEPVSLSLKRPFRISGREVRRVRGYWCTCVIEGNSGRGFGLRRGIAEEMATLDAV CCCCCCCEEEEECCCCCCCCHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHH ARRYDEPLCRVWGREPASIESFATVDLVGAEQAEKLARRYYLRGYRKLKVKVGGDDLKRD HHHHCCHHHHHCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEEECCHHHHHH LERVEACVKSAEFDALILDGNEGLTVEEVFRLLDFLDFDGDVYLEHPTPPDSLEEVCESC HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHC EAPVIVDVMDLGARSIDDVLDVAEPCDIVNIKTQEVGFVGGLRLARDAREEGFKVMVGCA CCCEEEEHHHCCCCHHHHHHHHCCCCCEEEEEHHHCCCHHHHHHHHHHHHCCCEEEEEHH VESFSSISAAAHLAAAVEADLCDLDGHLFLDEDVVSNPGYAPVMVTEGPGWEVRVERPKP HHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHCCCCCCEEEEECCCCCEEEECCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]