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The map label for this gene is 20093980

Identifier: 20093980

GI number: 20093980

Start: 506098

End: 506835

Strand: Direct

Name: 20093980

Synonym: MK0542

Alternate gene names: NA

Gene position: 506098-506835 (Clockwise)

Preceding gene: 20093979

Following gene: 20093982

Centisome position: 29.86

GC content: 56.23

Gene sequence:

>738_bases
ATGAAACTGGTGATCGACGTACCGAAGGAGATCGCTAAGGCCTTGGACAGCAAAACACGACGTGAAATCCTGAAACTGCT
GGAAGAACGCGGCTCGATGACGATATCGGACATCGCCAGGGAGCTGAACCTGTCCAAATCAACTGTCCATCACCATTTAC
AGGAACTCCGAAAGGCCGGTCTCGTGGACGTCATCAAAGAGGATCGCGAAACTCCCCTCCCGAAGCGCTACTACGGGCTC
GTGAGAAGACTCGTCCGAGTATCGAAGCCGAAGCTTGAAGATGCCTCCGAGTATGTCATAAAAGCCCTAGAACGTGGGGA
GGACCTGAGAACATCGATGTTCCTAGCGATCGCGGCAGCGTATCGCGCGGTGTTGGAGTCCCTGGGTATCGACGCCTCGG
AGGTCCTGTACGAGCTCGGAAAGGAGATCGGTAAGCGACTCGCGGAACTAGGATCCGAAGAGACCGTGCTGCGGAAGGGC
TTGGAGATCATAGCCGAGTCAGTAGAATTCCGTCAGGAGAACGACCGTGTGGTGGTCGAGATTGAAGGATGCCACGAGTG
TTCCGACCTACCCTACGGTCCCGCATGTCATTTGGAGGCGGGAATCATAGCCGGTGTTCTGTCGAACCTGAGGGAACGAC
CTTACGAAGTCCGGGAGGTGGAGTGCTGCGGGGAAGGCGCTGATAGATGCGTGTTCGTGGCGGAACCAGCTACTGACGAA
GAACGCCCCAAGTCCTAG

Upstream 100 bases:

>100_bases
ATGACGAGCTCGGGGTTCGGTTCGGGCAGACAAAGTACGGTCGGTGGGGGGTCCGAGCTGGTACGGCCCGGCAGTCAGAA
CCTTCGAGGGGACCCGAGCT

Downstream 100 bases:

>100_bases
TGACTTTAGACACTCCTTCTACCCAGGCGACCAAGGCTAACGTGGCGGCTATCTCTTCGTCGGTCACTTCGGCGACGTTC
TTCGCCGTCTCGGCTATGAG

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKLVIDVPKEIAKALDSKTRREILKLLEERGSMTISDIARELNLSKSTVHHHLQELRKAGLVDVIKEDRETPLPKRYYGL
VRRLVRVSKPKLEDASEYVIKALERGEDLRTSMFLAIAAAYRAVLESLGIDASEVLYELGKEIGKRLAELGSEETVLRKG
LEIIAESVEFRQENDRVVVEIEGCHECSDLPYGPACHLEAGIIAGVLSNLRERPYEVREVECCGEGADRCVFVAEPATDE
ERPKS

Sequences:

>Translated_245_residues
MKLVIDVPKEIAKALDSKTRREILKLLEERGSMTISDIARELNLSKSTVHHHLQELRKAGLVDVIKEDRETPLPKRYYGL
VRRLVRVSKPKLEDASEYVIKALERGEDLRTSMFLAIAAAYRAVLESLGIDASEVLYELGKEIGKRLAELGSEETVLRKG
LEIIAESVEFRQENDRVVVEIEGCHECSDLPYGPACHLEAGIIAGVLSNLRERPYEVREVECCGEGADRCVFVAEPATDE
ERPKS
>Mature_245_residues
MKLVIDVPKEIAKALDSKTRREILKLLEERGSMTISDIARELNLSKSTVHHHLQELRKAGLVDVIKEDRETPLPKRYYGL
VRRLVRVSKPKLEDASEYVIKALERGEDLRTSMFLAIAAAYRAVLESLGIDASEVLYELGKEIGKRLAELGSEETVLRKG
LEIIAESVEFRQENDRVVVEIEGCHECSDLPYGPACHLEAGIIAGVLSNLRERPYEVREVECCGEGADRCVFVAEPATDE
ERPKS

Specific function: Unknown

COG id: COG1719

COG function: function code R; Predicted hydrocarbon binding protein (contains V4R domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the M.jannaschii MJ0150/MJ0739/MJ0745/MJ1460/MJ1642 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019642
- InterPro:   IPR004096 [H]

Pfam domain/function: PF10702 DUF2507; PF02830 V4R [H]

EC number: NA

Molecular weight: Translated: 27512; Mature: 27512

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVIDVPKEIAKALDSKTRREILKLLEERGSMTISDIARELNLSKSTVHHHLQELRKAG
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCC
LVDVIKEDRETPLPKRYYGLVRRLVRVSKPKLEDASEYVIKALERGEDLRTSMFLAIAAA
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
YRAVLESLGIDASEVLYELGKEIGKRLAELGSEETVLRKGLEIIAESVEFRQENDRVVVE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEE
IEGCHECSDLPYGPACHLEAGIIAGVLSNLRERPYEVREVECCGEGADRCVFVAEPATDE
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCC
ERPKS
CCCCC
>Mature Secondary Structure
MKLVIDVPKEIAKALDSKTRREILKLLEERGSMTISDIARELNLSKSTVHHHLQELRKAG
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCC
LVDVIKEDRETPLPKRYYGLVRRLVRVSKPKLEDASEYVIKALERGEDLRTSMFLAIAAA
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
YRAVLESLGIDASEVLYELGKEIGKRLAELGSEETVLRKGLEIIAESVEFRQENDRVVVE
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEE
IEGCHECSDLPYGPACHLEAGIIAGVLSNLRERPYEVREVECCGEGADRCVFVAEPATDE
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCC
ERPKS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]