| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093930
Identifier: 20093930
GI number: 20093930
Start: 453622
End: 454674
Strand: Direct
Name: 20093930
Synonym: MK0492
Alternate gene names: NA
Gene position: 453622-454674 (Clockwise)
Preceding gene: 20093926
Following gene: 20093938
Centisome position: 26.76
GC content: 57.45
Gene sequence:
>1053_bases TTGGGCCTCGGCGTCGCACTGGACATTAAGGAGGGTAAAGTCGTCGTTCGTCGGAGCCCCGACGTCCGAGAGTACATACC GATCTCTCGACGTTACGATCTACCGGACGACCCGCACGAGTTAGCGACGCTTTTAGTGGAACGTTACGACTTGGACTTCG TCTACGTTGCGGACTTGGACGCTATTCTACGCGGCGAGCCCGCAGATACCTCAGATGCTCTTGAGTCATTAGAGAAGCCC GTCTTCGTGGACGTGGGGGCGTGTGAACCCGACCTTCCGAGTCACGCCCACAGGGTGATCCCTACGGAATGCTATGACGA CAAGAGCGAGTACATCGAAGATCTAGAGGAGGACGAGAGTGCTGTGGCAGGGCTGGACTTGAACGGCTCTGAGATCCTCG GCCCCTGGGACGGCGTGGGCGACTTCTTGGACACCGTGGTGGAAGTAGTGTACAGACGCGATCCGGGCGTGCTCGTGATC GACGTCGGTGCAGTCGGTTCGAAGGAGGGACCGCCGTACGAGGCCGCGACGTCCGTCGGGATGTACTCTACGGCCCTGAT CGGAGGGGGCGTCGGGCATCCGGAGCACGTGAAGCTGGCTTTGGGTACTCCCGGCGTTTCGGGCGTTATCCTTGGGACCA TACTCTTCGAGGGGGTGGATCCCATGAAGCTGGAACAGGCGCGCCGAGAGGGTAAGCGACTGCGAGTCCACCACATGGGG TTAGAGGAGGAGTACTTGAACCTCATCAAAGAAGGTAAAAAGACCGTAGAAGGACGCGTGAAGGACGACAAACGTGCCAG AATAAAGCCCGGAGATAAGATACTCTTCAACCGTAGGCTTCTCGTGAAGGTGATAGACGTGAGAGAGTACGACTCGTTCG AAGAGATGTTGAGGGAAGAGGGGCTCGAAAACGTCCTTCCGAACGTGGATTCCATCGAGGAGGGCGTGGAGATATACCGG CGCTTTTACTCGAGTGGGAAGGAGAAAATGTTCGGGGTGCTGGCGATCGAGATCGAACCGATCATGGATCTCTGGGAAGG AATCTGTGACTGA
Upstream 100 bases:
>100_bases AACTCGGGTGTTGGAGGGTAAGGCCGAACACCTCGAGGTGAGAGCACTCCAACTGTACAAGGCAGCCGCGTGGGACCTAC TGGAAGCCGAGGAGAAACAC
Downstream 100 bases:
>100_bases ACGTCACTCGAGGATGGGGCCTTCAGGACTGGGGATGAACCCTATCCGCTCCAAGAACTTGTCATCGTATATCAGCTCCA CTTCGCCGCCTCGCAGGTAC
Product: fused ProFAR isomerase-like protein/uncharacterized protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MGLGVALDIKEGKVVVRRSPDVREYIPISRRYDLPDDPHELATLLVERYDLDFVYVADLDAILRGEPADTSDALESLEKP VFVDVGACEPDLPSHAHRVIPTECYDDKSEYIEDLEEDESAVAGLDLNGSEILGPWDGVGDFLDTVVEVVYRRDPGVLVI DVGAVGSKEGPPYEAATSVGMYSTALIGGGVGHPEHVKLALGTPGVSGVILGTILFEGVDPMKLEQARREGKRLRVHHMG LEEEYLNLIKEGKKTVEGRVKDDKRARIKPGDKILFNRRLLVKVIDVREYDSFEEMLREEGLENVLPNVDSIEEGVEIYR RFYSSGKEKMFGVLAIEIEPIMDLWEGICD
Sequences:
>Translated_350_residues MGLGVALDIKEGKVVVRRSPDVREYIPISRRYDLPDDPHELATLLVERYDLDFVYVADLDAILRGEPADTSDALESLEKP VFVDVGACEPDLPSHAHRVIPTECYDDKSEYIEDLEEDESAVAGLDLNGSEILGPWDGVGDFLDTVVEVVYRRDPGVLVI DVGAVGSKEGPPYEAATSVGMYSTALIGGGVGHPEHVKLALGTPGVSGVILGTILFEGVDPMKLEQARREGKRLRVHHMG LEEEYLNLIKEGKKTVEGRVKDDKRARIKPGDKILFNRRLLVKVIDVREYDSFEEMLREEGLENVLPNVDSIEEGVEIYR RFYSSGKEKMFGVLAIEIEPIMDLWEGICD >Mature_349_residues GLGVALDIKEGKVVVRRSPDVREYIPISRRYDLPDDPHELATLLVERYDLDFVYVADLDAILRGEPADTSDALESLEKPV FVDVGACEPDLPSHAHRVIPTECYDDKSEYIEDLEEDESAVAGLDLNGSEILGPWDGVGDFLDTVVEVVYRRDPGVLVID VGAVGSKEGPPYEAATSVGMYSTALIGGGVGHPEHVKLALGTPGVSGVILGTILFEGVDPMKLEQARREGKRLRVHHMGL EEEYLNLIKEGKKTVEGRVKDDKRARIKPGDKILFNRRLLVKVIDVREYDSFEEMLREEGLENVLPNVDSIEEGVEIYRR FYSSGKEKMFGVLAIEIEPIMDLWEGICD
Specific function: Unknown
COG id: COG1411
COG function: function code R; Uncharacterized protein related to proFAR isomerase (HisA)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38908; Mature: 38776
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLGVALDIKEGKVVVRRSPDVREYIPISRRYDLPDDPHELATLLVERYDLDFVYVADLD CCCCEEEEECCCEEEEECCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCHH AILRGEPADTSDALESLEKPVFVDVGACEPDLPSHAHRVIPTECYDDKSEYIEDLEEDES HHHCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHCCH AVAGLDLNGSEILGPWDGVGDFLDTVVEVVYRRDPGVLVIDVGAVGSKEGPPYEAATSVG HEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHCC MYSTALIGGGVGHPEHVKLALGTPGVSGVILGTILFEGVDPMKLEQARREGKRLRVHHMG HHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECC LEEEYLNLIKEGKKTVEGRVKDDKRARIKPGDKILFNRRLLVKVIDVREYDSFEEMLREE CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCEEEEEEECHHCCHHHHHHHHHC GLENVLPNVDSIEEGVEIYRRFYSSGKEKMFGVLAIEIEPIMDLWEGICD CHHHHCCCHHHHHHHHHHHHHHHHCCHHHEEEEEEEEEHHHHHHHHHHCC >Mature Secondary Structure GLGVALDIKEGKVVVRRSPDVREYIPISRRYDLPDDPHELATLLVERYDLDFVYVADLD CCCEEEEECCCEEEEECCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCHH AILRGEPADTSDALESLEKPVFVDVGACEPDLPSHAHRVIPTECYDDKSEYIEDLEEDES HHHCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHCCH AVAGLDLNGSEILGPWDGVGDFLDTVVEVVYRRDPGVLVIDVGAVGSKEGPPYEAATSVG HEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHCC MYSTALIGGGVGHPEHVKLALGTPGVSGVILGTILFEGVDPMKLEQARREGKRLRVHHMG HHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECC LEEEYLNLIKEGKKTVEGRVKDDKRARIKPGDKILFNRRLLVKVIDVREYDSFEEMLREE CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCEEEEEEECHHCCHHHHHHHHHC GLENVLPNVDSIEEGVEIYRRFYSSGKEKMFGVLAIEIEPIMDLWEGICD CHHHHCCCHHHHHHHHHHHHHHHHCCHHHEEEEEEEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA