Click here to switch to the map view.

The map label for this gene is 20093926

Identifier: 20093926

GI number: 20093926

Start: 449908

End: 450531

Strand: Direct

Name: 20093926

Synonym: MK0488

Alternate gene names: NA

Gene position: 449908-450531 (Clockwise)

Preceding gene: 20093925

Following gene: 20093930

Centisome position: 26.54

GC content: 57.05

Gene sequence:

>624_bases
GTGGGTGAAAAATTAACGTTGGAGGAAGGGGAGTTCCTAGTTCGCCTTGCGCGGAAAGCAATCGTACATTACCTTGAGTC
CGGCAAAAAGATCGAGGAAAAGCCTCCAACTCAACGACTCGCAGAAAAGCGCGGAGTCTTCGTCACGCTTAAGAAGTACC
CGGACGACGAACTGAGAGGCTGCATCGGGTTTCCGGAACCCATCAAGCCCCTGGTGGAAGCCACCGTAGAGGCCGCAATC
AGTGCGGCCACCGGCGATCCGCGGTTCCCGCCTATGCGCGACCCTTCGGAGATGGAGGAGATCAAGATAGAGGTCAGCGT
GTTAACACCACCTAAGAAACTGGAGGTCGATAACCCGAAAGAGTACGTCGAGAAAATCGAGATCGGAAGACACGGTATCA
TAGTGCGCCGCGGAGCCCGATCGGGGCTCTTGCTGCCGCAGGTACCAGTGGAGGAAGGTTGGGACGAAATAGAGTTCCTG
TCTCACGCCTGCCTGAAGGCGGGTTTACCACCGGACTGGTGGTGTTCTCCGGACTGCGAAATCTACGTGTTCGAAGCGCA
GGTGTTCGAGGAAGAGGAGCCGGAAGGGCCGGTCCGGGAAAGGGATCTAGCCGAGGAGCAGTGA

Upstream 100 bases:

>100_bases
TGTCGGCGTAAGTACTGGGTCGGCGGGCATTGGCGAGATATGGAGGAGACTATCGACCGCGTAAAGAAAGCCCTACGCCG
AGTTCAAAGGGGGCATCTAC

Downstream 100 bases:

>100_bases
ACCGCTGATCCGGAAGGCCTCGAAGGCTTCCGCGTACTTGACACCTATCTCCATCCCACGGAACTCCGCGGTCTTCATCA
CCATTTCCTCACTGATCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MGEKLTLEEGEFLVRLARKAIVHYLESGKKIEEKPPTQRLAEKRGVFVTLKKYPDDELRGCIGFPEPIKPLVEATVEAAI
SAATGDPRFPPMRDPSEMEEIKIEVSVLTPPKKLEVDNPKEYVEKIEIGRHGIIVRRGARSGLLLPQVPVEEGWDEIEFL
SHACLKAGLPPDWWCSPDCEIYVFEAQVFEEEEPEGPVRERDLAEEQ

Sequences:

>Translated_207_residues
MGEKLTLEEGEFLVRLARKAIVHYLESGKKIEEKPPTQRLAEKRGVFVTLKKYPDDELRGCIGFPEPIKPLVEATVEAAI
SAATGDPRFPPMRDPSEMEEIKIEVSVLTPPKKLEVDNPKEYVEKIEIGRHGIIVRRGARSGLLLPQVPVEEGWDEIEFL
SHACLKAGLPPDWWCSPDCEIYVFEAQVFEEEEPEGPVRERDLAEEQ
>Mature_206_residues
GEKLTLEEGEFLVRLARKAIVHYLESGKKIEEKPPTQRLAEKRGVFVTLKKYPDDELRGCIGFPEPIKPLVEATVEAAIS
AATGDPRFPPMRDPSEMEEIKIEVSVLTPPKKLEVDNPKEYVEKIEIGRHGIIVRRGARSGLLLPQVPVEEGWDEIEFLS
HACLKAGLPPDWWCSPDCEIYVFEAQVFEEEEPEGPVRERDLAEEQ

Specific function: Unknown

COG id: COG2078

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 AMMECR1 domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y488_METKA (Q8TY18)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_613773.1
- ProteinModelPortal:   Q8TY18
- SMR:   Q8TY18
- GeneID:   1477791
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK0488
- NMPDR:   fig|190192.1.peg.486
- HOGENOM:   HBG624682
- OMA:   WDEEEFL
- BioCyc:   MKAN190192:MK0488-MONOMER
- HAMAP:   MF_00645
- InterPro:   IPR002733
- TIGRFAMs:   TIGR00296

Pfam domain/function: PF01871 AMMECR1

EC number: NA

Molecular weight: Translated: 23458; Mature: 23327

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS51112 AMMECR1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEKLTLEEGEFLVRLARKAIVHYLESGKKIEEKPPTQRLAEKRGVFVTLKKYPDDELRG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCEEEEEECCCCHHHHC
CIGFPEPIKPLVEATVEAAISAATGDPRFPPMRDPSEMEEIKIEVSVLTPPKKLEVDNPK
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEEEEECCCCCCCCCCHH
EYVEKIEIGRHGIIVRRGARSGLLLPQVPVEEGWDEIEFLSHACLKAGLPPDWWCSPDCE
HHHHHHHCCCCCEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCE
IYVFEAQVFEEEEPEGPVRERDLAEEQ
EEEEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GEKLTLEEGEFLVRLARKAIVHYLESGKKIEEKPPTQRLAEKRGVFVTLKKYPDDELRG
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCEEEEEECCCCHHHHC
CIGFPEPIKPLVEATVEAAISAATGDPRFPPMRDPSEMEEIKIEVSVLTPPKKLEVDNPK
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEEEEECCCCCCCCCCHH
EYVEKIEIGRHGIIVRRGARSGLLLPQVPVEEGWDEIEFLSHACLKAGLPPDWWCSPDCE
HHHHHHHCCCCCEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCE
IYVFEAQVFEEEEPEGPVRERDLAEEQ
EEEEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014