Click here to switch to the map view.

The map label for this gene is 18977765

Identifier: 18977765

GI number: 18977765

Start: 1306311

End: 1308209

Strand: Direct

Name: 18977765

Synonym: PF1393

Alternate gene names: NA

Gene position: 1306311-1308209 (Clockwise)

Preceding gene: 18977761

Following gene: 18977769

Centisome position: 68.46

GC content: 41.44

Gene sequence:

>1899_bases
ATGAGAGGATACTTAACTTTTGTCTTACACTCCCATATACCTTATGTAAGAAAGCACGGAAAGTGGCCCTTTGGGGAAGA
GTGGGTTTTTGAGGCTATTGCAGAAACATACATTCCTCTACTTATGGAGTTTGAAAAGTTGCGCAACAAAGGTGTAAACT
TCAAACTCGTTATAAGCTTCTCTCCAGTGCTATTGGAGCAACTAAACGACGAATACATGAAAAAAGAGTTCGAAAAGTAT
ATCACTAGAAAATTAGAGCTTATGAAAGAAGATCTTACAAAATACACGAACGATCAATTGAAAAAAGCAATAGCCTACAT
GATAACATACTTTGAAGATGTTTATAGGTATTGGAAGGAAATTAATGGCGACATTATAGGAAAATTTAGAGAATTCCAAG
AAGCAGGTTACCTTGAAATAATAACATCAGCTGCAACTCATGGATACCTCCCACTTTTGGGAAGGGATGAAGCTATCGAA
GGTCAAATTGCAAATGCGATAAAGACTTACGAAAAGTATTTCCAGAGAAGGCCCAGAGGAATGTGGTTACCCGAGTGTGC
ATACAGGCCTGATGGATACTGGAGAAGCCCGAGTACAGGAGAGGTAGTTTGGAGGAAGGGAATTGAGCACTTCCTTAAGA
AGTATGGGATAGACTACTTTTTCGTGGAGAGTCATCTAATTGACGAAGGACCAGCTACTTCCAAGTACGGGGAGATTTTA
CCCGAAAAAACCAAGAAGTCGACGCTAAGACCCTACTTCCTTAAAAATGGAATTGCCGTTTTTGCAAGAAATAGAGAAAC
GGGGATTCAAGTGTGGAGCGCAGACATAGGGTACCCAGGAGACTTCTGGTATAGAGAATTCCACAAGAAGGCCGAGAAAA
GTGGAGGACAGTATTGGAGGGTTACATCTAAGGAGATTGACCTTGGAGGAAAAGAGCCCTATGTGCCAGAAAAGGCCATG
GAAAGAGTTGAAGAACATGCAAGGCACTTTATATCATTGGTATCCTCCCTTCTAGAAGAATTCAAGAAAAAAGAAGGAGA
ATATGGAATAGTAGTTGCTCCCTATGATACCGAACTATTTGGACACTGGTGGTTCGAGGGGGTTAAGTGGTTAGGAAAAG
TTTTGGAGCTTGCCGAGAAGCTAGGAATTAAGACTACGACAATATCCGAATTTCTAGACAACTTCGATGGTAAAAGGTAT
GAAATAGAGCTACCTGAAGGCTCCTGGGGAATGTTCGGAACTCACTATACATGGTGGAACCCAGAAGTTGAGTGGACATG
GCCAATAATCCACTTGGCGGAAGATAGAATGGTGGCATTAGCTAGCAAATACCTTGGAAGAGACGAGCTAACAGATAGGA
CATTGGATCAGCTTGGCAGAGAGCTTCTTCTTATTGAATCAAGTGACTGGCAGTTCTTAATAACAACAAAGCAGGCAAAG
AAATATGCCAAAAAGAGGATTCTCGAGCACGCCCACATTTTCCACAGGCTTGCAAATTCCCTGGAAGTGTATGTAAAAAC
TGGGGAATTTCCGGAGATGGAACTTCTCGAAGAAGCAGAAGATAAAGACAATGTCTTCCATCCAATAGTTATAGAGCCAT
ATGTTAGTGAAGTTCCGCCTGAAGTTCCAGAATACATTGAGCCTCCCCAGATTCCCAAAGAGGAAGAAGATAAAGAGAGA
GGAAAATTTTCAAGTGGCCAGAGCATGGGCAGAGACTTCGAAGAATTTTTGCTCTCCATAAAGGGAATTGGTCCAAAGAC
CATAGAAAAGCTCAAGAAGGTAGGTATAACGAAGCCTGAAGACTTCCTTAATTGGAAGATAGAGGAGCTTGCCAAAAAAG
CAAGAGTTCCAAAAAAGAGATTAGAAAGGATCTATAGGAGATTAAGAGCTCTTCTTTAG

Upstream 100 bases:

>100_bases
TATATTTTATATACATAAAGCATTTTTTAGTAAACAAAGCTAAGATATAGGCAAAATCGTTAAATACTCTCTTCATAAAT
CTTTTCATAGGGAATTAGCC

Downstream 100 bases:

>100_bases
TATTTCTACAATTTTTTCCGCTACTTCTACTCCCGCTCTCTCCTGGGCTTCGTAAGTTGAGGCTCCTATGTGAGGTGTTA
GAACAACATTGTCAAATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Alpha-Amylase; (1-_4)-Alpha-D-Glucan Branching; Family; Glycogen Branching; Glycosyl Transferase/Glycoside Hydrolase-Like Protein; Glycosyl Hydrolase Family Protein

Number of amino acids: Translated: 632; Mature: 632

Protein sequence:

>632_residues
MRGYLTFVLHSHIPYVRKHGKWPFGEEWVFEAIAETYIPLLMEFEKLRNKGVNFKLVISFSPVLLEQLNDEYMKKEFEKY
ITRKLELMKEDLTKYTNDQLKKAIAYMITYFEDVYRYWKEINGDIIGKFREFQEAGYLEIITSAATHGYLPLLGRDEAIE
GQIANAIKTYEKYFQRRPRGMWLPECAYRPDGYWRSPSTGEVVWRKGIEHFLKKYGIDYFFVESHLIDEGPATSKYGEIL
PEKTKKSTLRPYFLKNGIAVFARNRETGIQVWSADIGYPGDFWYREFHKKAEKSGGQYWRVTSKEIDLGGKEPYVPEKAM
ERVEEHARHFISLVSSLLEEFKKKEGEYGIVVAPYDTELFGHWWFEGVKWLGKVLELAEKLGIKTTTISEFLDNFDGKRY
EIELPEGSWGMFGTHYTWWNPEVEWTWPIIHLAEDRMVALASKYLGRDELTDRTLDQLGRELLLIESSDWQFLITTKQAK
KYAKKRILEHAHIFHRLANSLEVYVKTGEFPEMELLEEAEDKDNVFHPIVIEPYVSEVPPEVPEYIEPPQIPKEEEDKER
GKFSSGQSMGRDFEEFLLSIKGIGPKTIEKLKKVGITKPEDFLNWKIEELAKKARVPKKRLERIYRRLRALL

Sequences:

>Translated_632_residues
MRGYLTFVLHSHIPYVRKHGKWPFGEEWVFEAIAETYIPLLMEFEKLRNKGVNFKLVISFSPVLLEQLNDEYMKKEFEKY
ITRKLELMKEDLTKYTNDQLKKAIAYMITYFEDVYRYWKEINGDIIGKFREFQEAGYLEIITSAATHGYLPLLGRDEAIE
GQIANAIKTYEKYFQRRPRGMWLPECAYRPDGYWRSPSTGEVVWRKGIEHFLKKYGIDYFFVESHLIDEGPATSKYGEIL
PEKTKKSTLRPYFLKNGIAVFARNRETGIQVWSADIGYPGDFWYREFHKKAEKSGGQYWRVTSKEIDLGGKEPYVPEKAM
ERVEEHARHFISLVSSLLEEFKKKEGEYGIVVAPYDTELFGHWWFEGVKWLGKVLELAEKLGIKTTTISEFLDNFDGKRY
EIELPEGSWGMFGTHYTWWNPEVEWTWPIIHLAEDRMVALASKYLGRDELTDRTLDQLGRELLLIESSDWQFLITTKQAK
KYAKKRILEHAHIFHRLANSLEVYVKTGEFPEMELLEEAEDKDNVFHPIVIEPYVSEVPPEVPEYIEPPQIPKEEEDKER
GKFSSGQSMGRDFEEFLLSIKGIGPKTIEKLKKVGITKPEDFLNWKIEELAKKARVPKKRLERIYRRLRALL
>Mature_632_residues
MRGYLTFVLHSHIPYVRKHGKWPFGEEWVFEAIAETYIPLLMEFEKLRNKGVNFKLVISFSPVLLEQLNDEYMKKEFEKY
ITRKLELMKEDLTKYTNDQLKKAIAYMITYFEDVYRYWKEINGDIIGKFREFQEAGYLEIITSAATHGYLPLLGRDEAIE
GQIANAIKTYEKYFQRRPRGMWLPECAYRPDGYWRSPSTGEVVWRKGIEHFLKKYGIDYFFVESHLIDEGPATSKYGEIL
PEKTKKSTLRPYFLKNGIAVFARNRETGIQVWSADIGYPGDFWYREFHKKAEKSGGQYWRVTSKEIDLGGKEPYVPEKAM
ERVEEHARHFISLVSSLLEEFKKKEGEYGIVVAPYDTELFGHWWFEGVKWLGKVLELAEKLGIKTTTISEFLDNFDGKRY
EIELPEGSWGMFGTHYTWWNPEVEWTWPIIHLAEDRMVALASKYLGRDELTDRTLDQLGRELLLIESSDWQFLITTKQAK
KYAKKRILEHAHIFHRLANSLEVYVKTGEFPEMELLEEAEDKDNVFHPIVIEPYVSEVPPEVPEYIEPPQIPKEEEDKER
GKFSSGQSMGRDFEEFLLSIKGIGPKTIEKLKKVGITKPEDFLNWKIEELAKKARVPKKRLERIYRRLRALL

Specific function: Unknown

COG id: COG1543

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74492; Mature: 74492

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGYLTFVLHSHIPYVRKHGKWPFGEEWVFEAIAETYIPLLMEFEKLRNKGVNFKLVISF
CCCCEEHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
SPVLLEQLNDEYMKKEFEKYITRKLELMKEDLTKYTNDQLKKAIAYMITYFEDVYRYWKE
CHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INGDIIGKFREFQEAGYLEIITSAATHGYLPLLGRDEAIEGQIANAIKTYEKYFQRRPRG
HCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
MWLPECAYRPDGYWRSPSTGEVVWRKGIEHFLKKYGIDYFFVESHLIDEGPATSKYGEIL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCHHHHHC
PEKTKKSTLRPYFLKNGIAVFARNRETGIQVWSADIGYPGDFWYREFHKKAEKSGGQYWR
CCHHHHHCCCCHHHHCCEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEE
VTSKEIDLGGKEPYVPEKAMERVEEHARHFISLVSSLLEEFKKKEGEYGIVVAPYDTELF
EECCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH
GHWWFEGVKWLGKVLELAEKLGIKTTTISEFLDNFDGKRYEIELPEGSWGMFGTHYTWWN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEC
PEVEWTWPIIHLAEDRMVALASKYLGRDELTDRTLDQLGRELLLIESSDWQFLITTKQAK
CCCEEEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCEEEEECHHHH
KYAKKRILEHAHIFHRLANSLEVYVKTGEFPEMELLEEAEDKDNVFHPIVIEPYVSEVPP
HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHCCCCCCCCCCEEECCHHHHCCC
EVPEYIEPPQIPKEEEDKERGKFSSGQSMGRDFEEFLLSIKGIGPKTIEKLKKVGITKPE
CCHHHCCCCCCCCCCCHHHHCCCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCH
DFLNWKIEELAKKARVPKKRLERIYRRLRALL
HHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRGYLTFVLHSHIPYVRKHGKWPFGEEWVFEAIAETYIPLLMEFEKLRNKGVNFKLVISF
CCCCEEHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
SPVLLEQLNDEYMKKEFEKYITRKLELMKEDLTKYTNDQLKKAIAYMITYFEDVYRYWKE
CHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INGDIIGKFREFQEAGYLEIITSAATHGYLPLLGRDEAIEGQIANAIKTYEKYFQRRPRG
HCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
MWLPECAYRPDGYWRSPSTGEVVWRKGIEHFLKKYGIDYFFVESHLIDEGPATSKYGEIL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCCHHHHHC
PEKTKKSTLRPYFLKNGIAVFARNRETGIQVWSADIGYPGDFWYREFHKKAEKSGGQYWR
CCHHHHHCCCCHHHHCCEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEE
VTSKEIDLGGKEPYVPEKAMERVEEHARHFISLVSSLLEEFKKKEGEYGIVVAPYDTELF
EECCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH
GHWWFEGVKWLGKVLELAEKLGIKTTTISEFLDNFDGKRYEIELPEGSWGMFGTHYTWWN
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEC
PEVEWTWPIIHLAEDRMVALASKYLGRDELTDRTLDQLGRELLLIESSDWQFLITTKQAK
CCCEEEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEECCCCEEEEECHHHH
KYAKKRILEHAHIFHRLANSLEVYVKTGEFPEMELLEEAEDKDNVFHPIVIEPYVSEVPP
HHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHCCCCCCCCCCEEECCHHHHCCC
EVPEYIEPPQIPKEEEDKERGKFSSGQSMGRDFEEFLLSIKGIGPKTIEKLKKVGITKPE
CCHHHCCCCCCCCCCCHHHHCCCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCH
DFLNWKIEELAKKARVPKKRLERIYRRLRALL
HHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA