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The map label for this gene is 18977761

Identifier: 18977761

GI number: 18977761

Start: 1302001

End: 1302837

Strand: Direct

Name: 18977761

Synonym: PF1389

Alternate gene names: NA

Gene position: 1302001-1302837 (Clockwise)

Preceding gene: 18977758

Following gene: 18977765

Centisome position: 68.23

GC content: 36.56

Gene sequence:

>837_bases
ATGTACATCAGACCATTTGACCCCTGGAAATCAAATATGTGCACTTGCCCGTTTAAATACACCCTTAACCCCTACACTGG
ATGCGATCATGCTTGTGTTTACTGTTACATAACATCCTACATTCCTAAAGCCTTTAAAGTGAGAATTAAAGAAAGCTTGC
TTCCTACGTTAGACAGGGAATTAAGGAAGTTTAATAAGAACTTTATAATTGCGATGTCATACTCCTCAGATCCCTATCCA
ACGATTGAAAAGGATCTCACGATAACGAGGAGAGTTCTAGAGCTATTCAAAAAATATGATATAAGATGTTTACTTTTGAC
GAAGTCTGATATATTTATAAGAGACCTAGATATAATTAAAGAGCTAAGGTGTGCAGTCGGAATTACAGTAACAACGGTAG
ATGAAAGAAAGGCTAAACTTTTGGAGCCAAATGCGCCTTCTCCTAAAGAAAGAATTAAAGCACTAAAACTTGCAAAGAAA
GAAGGCATTCCTGTGTACGCAAGAATAGATCCAATTATTCCCTTTTACACCTGGGAAGATTTCGACAAAACTCTAAAAGC
ATTGAAATTTGTTAGTCATATAACAGTCTCAACCTTAAAACTAAGGCCTGACATTAAGGCAAGAATGAAAGCAAAATTTC
CCGAGCTAATGGAAAAACTAGAGCCCCTATACACCGAAAAATATGAAGGATATTATTACCTCAAAAAAGATCTGAGAATG
GAGATATTAAGGACAGCGAGGGAAAAAATTGAAGAAGCTGGAATAACATTCGGTTCCTGTAGGGAGGGATATTATTCTTA
TCCCACTTGTGATGGTTCTCATCTAGTTCCTAGATAA

Upstream 100 bases:

>100_bases
ACTTTACTATTCCCTTCACTATGTTACTCATTCCTCCATCACCCTTCTGGATTGACCCTAAAAATTTAAATTAATTTCTC
CATTCAAGCATTAAATGAAA

Downstream 100 bases:

>100_bases
CTTTCCTCTAAACTTTTGGACTACAAGTTGTATATCCTCATCGGAAACTATTTGTGAGGCTTCCCTTTCGGCTAATCTTT
TCCTCTTTAATGCAATTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MYIRPFDPWKSNMCTCPFKYTLNPYTGCDHACVYCYITSYIPKAFKVRIKESLLPTLDRELRKFNKNFIIAMSYSSDPYP
TIEKDLTITRRVLELFKKYDIRCLLLTKSDIFIRDLDIIKELRCAVGITVTTVDERKAKLLEPNAPSPKERIKALKLAKK
EGIPVYARIDPIIPFYTWEDFDKTLKALKFVSHITVSTLKLRPDIKARMKAKFPELMEKLEPLYTEKYEGYYYLKKDLRM
EILRTAREKIEEAGITFGSCREGYYSYPTCDGSHLVPR

Sequences:

>Translated_278_residues
MYIRPFDPWKSNMCTCPFKYTLNPYTGCDHACVYCYITSYIPKAFKVRIKESLLPTLDRELRKFNKNFIIAMSYSSDPYP
TIEKDLTITRRVLELFKKYDIRCLLLTKSDIFIRDLDIIKELRCAVGITVTTVDERKAKLLEPNAPSPKERIKALKLAKK
EGIPVYARIDPIIPFYTWEDFDKTLKALKFVSHITVSTLKLRPDIKARMKAKFPELMEKLEPLYTEKYEGYYYLKKDLRM
EILRTAREKIEEAGITFGSCREGYYSYPTCDGSHLVPR
>Mature_278_residues
MYIRPFDPWKSNMCTCPFKYTLNPYTGCDHACVYCYITSYIPKAFKVRIKESLLPTLDRELRKFNKNFIIAMSYSSDPYP
TIEKDLTITRRVLELFKKYDIRCLLLTKSDIFIRDLDIIKELRCAVGITVTTVDERKAKLLEPNAPSPKERIKALKLAKK
EGIPVYARIDPIIPFYTWEDFDKTLKALKFVSHITVSTLKLRPDIKARMKAKFPELMEKLEPLYTEKYEGYYYLKKDLRM
EILRTAREKIEEAGITFGSCREGYYSYPTCDGSHLVPR

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 32646; Mature: 32646

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIRPFDPWKSNMCTCPFKYTLNPYTGCDHACVYCYITSYIPKAFKVRIKESLLPTLDRE
CCCCCCCCCCCCCEECCEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LRKFNKNFIIAMSYSSDPYPTIEKDLTITRRVLELFKKYDIRCLLLTKSDIFIRDLDIIK
HHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEHHHHHHH
ELRCAVGITVTTVDERKAKLLEPNAPSPKERIKALKLAKKEGIPVYARIDPIIPFYTWED
HHHHHHCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEECHHH
FDKTLKALKFVSHITVSTLKLRPDIKARMKAKFPELMEKLEPLYTEKYEGYYYLKKDLRM
HHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHH
EILRTAREKIEEAGITFGSCREGYYSYPTCDGSHLVPR
HHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYIRPFDPWKSNMCTCPFKYTLNPYTGCDHACVYCYITSYIPKAFKVRIKESLLPTLDRE
CCCCCCCCCCCCCEECCEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LRKFNKNFIIAMSYSSDPYPTIEKDLTITRRVLELFKKYDIRCLLLTKSDIFIRDLDIIK
HHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEHHHHHHH
ELRCAVGITVTTVDERKAKLLEPNAPSPKERIKALKLAKKEGIPVYARIDPIIPFYTWED
HHHHHHCCEEEEECHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCEECHHH
FDKTLKALKFVSHITVSTLKLRPDIKARMKAKFPELMEKLEPLYTEKYEGYYYLKKDLRM
HHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHH
EILRTAREKIEEAGITFGSCREGYYSYPTCDGSHLVPR
HHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]