The gene/protein map for NC_003366 is currently unavailable.
Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is ybbP [H]

Identifier: 18311333

GI number: 18311333

Start: 2710484

End: 2711341

Strand: Reverse

Name: ybbP [H]

Synonym: CPE2351

Alternate gene names: 18311333

Gene position: 2711341-2710484 (Counterclockwise)

Preceding gene: 18311336

Following gene: 18311332

Centisome position: 89.44

GC content: 28.09

Gene sequence:

>858_bases
GTGCAAGAATTAATAATGATATTTACAAATAGTTTAAAGGATATATCTATTTGGTCCATCATAGATATATTAATTGTAGC
TTTTATATTTTATAGGGGATATATATTAATAAAAGAAACAAGGGCAGAGCAATTATTAAAGGGAGTAATATTATTATTGA
TTTTAATTCCTATAAGCTATGTTTTAAGACTTCAAATGTTGAATTTTATATTAACAAAAACATTAACCATAGGTGTTTTA
TCAATAATTATTATTTTCCAACCAGAAATAAGAAGAGCACTAGAACATATAGGAAGTACTGCCTTTGATGATTTTCATGT
TATTCAGGATGATCAAAAGTTAGAAGAAGTTATTGATCAACTTATAGTAGCAGTAGAGGATATGGCTGAAACTAAAACTG
GTGCCTTAATAGCTATAGAGCAAGGGACAGGATTAGCAGAAATAATTTCTACGGGAACCCAATTAGATGCAGTAATAACT
TCTGCATTAATAGAGAATATATTCTTTAAGAACACTCCATTACATGATGGAGCAACTATAATTAGAAATGATAGAATCGT
TTCAGCAGGTTGTGTCTTACCATTAACAAATAATAATACTATAAATAAAAAACTTGGTACTAGACATAGAGCTGCTATAG
GGTTATCTGAAATATCAGATGCTTTAGTTATTGTTGTTTCAGAAGAAACAGGAGCTATATCTTTAGCTGTAAAAGGTAGA
TTAACAAGAAATTATGATGGTAAAAAATTAAAAAATATATTATTAAAAGTTATGAGAAATAGACGTGATAAGAGAGGGAA
AACTTATGGAGAGAAGGTGAAAATATGCTTAAAAAAATTGAAGGAAAGAATTTCTTAG

Upstream 100 bases:

>100_bases
ACCTAGAATATGTAAAACTGAAAAGAAATCATTTAAAATGTATCTTATAATTAGATTTTTATTGTATAATTTAATTGTTA
CGGTAATGGAGGTGAAATTT

Downstream 100 bases:

>100_bases
TAAAATTTATATGCTTATTATTATCCTTTTCTCTTTGGCTATATATAATAAATGTAGAAAATCCAGTGAGAGAGCTTAAA
TTAAATAACGTGCCAGTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MQELIMIFTNSLKDISIWSIIDILIVAFIFYRGYILIKETRAEQLLKGVILLLILIPISYVLRLQMLNFILTKTLTIGVL
SIIIIFQPEIRRALEHIGSTAFDDFHVIQDDQKLEEVIDQLIVAVEDMAETKTGALIAIEQGTGLAEIISTGTQLDAVIT
SALIENIFFKNTPLHDGATIIRNDRIVSAGCVLPLTNNNTINKKLGTRHRAAIGLSEISDALVIVVSEETGAISLAVKGR
LTRNYDGKKLKNILLKVMRNRRDKRGKTYGEKVKICLKKLKERIS

Sequences:

>Translated_285_residues
MQELIMIFTNSLKDISIWSIIDILIVAFIFYRGYILIKETRAEQLLKGVILLLILIPISYVLRLQMLNFILTKTLTIGVL
SIIIIFQPEIRRALEHIGSTAFDDFHVIQDDQKLEEVIDQLIVAVEDMAETKTGALIAIEQGTGLAEIISTGTQLDAVIT
SALIENIFFKNTPLHDGATIIRNDRIVSAGCVLPLTNNNTINKKLGTRHRAAIGLSEISDALVIVVSEETGAISLAVKGR
LTRNYDGKKLKNILLKVMRNRRDKRGKTYGEKVKICLKKLKERIS
>Mature_285_residues
MQELIMIFTNSLKDISIWSIIDILIVAFIFYRGYILIKETRAEQLLKGVILLLILIPISYVLRLQMLNFILTKTLTIGVL
SIIIIFQPEIRRALEHIGSTAFDDFHVIQDDQKLEEVIDQLIVAVEDMAETKTGALIAIEQGTGLAEIISTGTQLDAVIT
SALIENIFFKNTPLHDGATIIRNDRIVSAGCVLPLTNNNTINKKLGTRHRAAIGLSEISDALVIVVSEETGAISLAVKGR
LTRNYDGKKLKNILLKVMRNRRDKRGKTYGEKVKICLKKLKERIS

Specific function: Unknown

COG id: COG1624

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014046
- InterPro:   IPR003390 [H]

Pfam domain/function: PF02457 DisA_N [H]

EC number: NA

Molecular weight: Translated: 31892; Mature: 31892

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQELIMIFTNSLKDISIWSIIDILIVAFIFYRGYILIKETRAEQLLKGVILLLILIPISY
CCHHEEEHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
VLRLQMLNFILTKTLTIGVLSIIIIFQPEIRRALEHIGSTAFDDFHVIQDDQKLEEVIDQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHH
LIVAVEDMAETKTGALIAIEQGTGLAEIISTGTQLDAVITSALIENIFFKNTPLHDGATI
HHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEE
IRNDRIVSAGCVLPLTNNNTINKKLGTRHRAAIGLSEISDALVIVVSEETGAISLAVKGR
EECCEEEECCEEEEECCCCCCHHHHCCHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECC
LTRNYDGKKLKNILLKVMRNRRDKRGKTYGEKVKICLKKLKERIS
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQELIMIFTNSLKDISIWSIIDILIVAFIFYRGYILIKETRAEQLLKGVILLLILIPISY
CCHHEEEHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHH
VLRLQMLNFILTKTLTIGVLSIIIIFQPEIRRALEHIGSTAFDDFHVIQDDQKLEEVIDQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHCCCCHHHHHHHHHH
LIVAVEDMAETKTGALIAIEQGTGLAEIISTGTQLDAVITSALIENIFFKNTPLHDGATI
HHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCEE
IRNDRIVSAGCVLPLTNNNTINKKLGTRHRAAIGLSEISDALVIVVSEETGAISLAVKGR
EECCEEEECCEEEEECCCCCCHHHHCCHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECC
LTRNYDGKKLKNILLKVMRNRRDKRGKTYGEKVKICLKKLKERIS
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]