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The map label for this gene is ybbR [H]

Identifier: 18311332

GI number: 18311332

Start: 2709189

End: 2710517

Strand: Reverse

Name: ybbR [H]

Synonym: CPE2350

Alternate gene names: 18311332

Gene position: 2710517-2709189 (Counterclockwise)

Preceding gene: 18311333

Following gene: 18311331

Centisome position: 89.41

GC content: 29.95

Gene sequence:

>1329_bases
ATGCTTAAAAAAATTGAAGGAAAGAATTTCTTAGTAAAATTTATATGCTTATTATTATCCTTTTCTCTTTGGCTATATAT
AATAAATGTAGAAAATCCAGTGAGAGAGCTTAAATTAAATAACGTGCCAGTTCAGGTTGTTAATAGGGAAGTACTTAAGG
ATTATGATTTAGTAATGGTTCCTAATCAAAATCTGACTGTGGATTTAGATTTAGAAGGGCCATCTACTGAAATATATAAG
GTCAAAAAAGAACAATTTAAGGTGGTCGTTAATTTAAGTGAGTATGTTTTAAAAGAGGGAGACAATAATATACCAGTACA
AATAGAAAGTTATCCTAATAATATAAACATAAAAAACAATGGATTTCTAAGGGTAAATGTTATTCTTGATAAATACCAAG
AAAAAAGTTTGCCTATTGTTAGCAAAATAAAGGTAAATACAGAGCATGGTACTTATGCAGATAAAATAAATATAAGCCCA
CAAAATGCCACTGTATCTGGAGCTCAATCCTTAGTAAGTAAGGTTAAGACTTTAGAAGTAAAAGGTGAGATAAACGATGT
TAGCAAGGCTGTTAATATGAATTTACCTGTTGTGGCAGTAGATGAAGAGGGTAACGAAATCAAGGATGTTAATATAAGTC
CTAATAAAGTAGATGTATCCTTTGGAGTTAAGAAATCTAAGGAAGTACCAGTTAGTGTAATTATAACTGGCACTCCTAAG
GAAGGGCTAGCACTAAAATCAATAACACCAAGTATTGCAAAGGTGACTTTACTTGGATCAGAGGATGCTTTAAGTAAGAT
TAGCTCTATTGAGACATCACCAATAGATGTTTCACAGTATGGAGATGATTCAGAGGTATCAACAGTACTAAAAATTCCAG
ATGGAGTAAGTTTAGCCTCTAATGATCAAGCTCAAATTAAAGTTAAATTAGATTTTAGTAAAGATGCTCAAAAGGAAATA
GAAGTACCAGTAACTACAGAGGGTACTTTGGATGGATATACTCCAGAATTAGATACTAAAACTATAAAAGTAACAATTAA
TGGTCCTGAAGATTCAGTAAATAGTATTGATTTAAGTAAATTTAAATGTACTATAGATATATCAAAGCTTACAGCTGATG
GAGGAAGTGTAAAGCCTAATATATCAAACTCTTACGATAATATAAAGGTTGTTAGTATAAATCCTACAGAGATTAAGGTA
ACCTTTAAAAAGAATACTGATTCAACAGAAAGTACAGAGAATAATTCTACAAAACCAAGTGATAATTCAAATAATAATAA
TAATACTTCAAACGGAAGTAATAATGAAAATTCAAATAATAAACAATAA

Upstream 100 bases:

>100_bases
CAAGAAATTATGATGGTAAAAAATTAAAAAATATATTATTAAAAGTTATGAGAAATAGACGTGATAAGAGAGGGAAAACT
TATGGAGAGAAGGTGAAAAT

Downstream 100 bases:

>100_bases
ATATTTACCACAGATTACTTTAAGCGTATTCTGTGGTAAAATAATTTACTAAAGAAATAAAATGGAGGAAGTTTTATGAC
TATTAGAATAAATAATATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MLKKIEGKNFLVKFICLLLSFSLWLYIINVENPVRELKLNNVPVQVVNREVLKDYDLVMVPNQNLTVDLDLEGPSTEIYK
VKKEQFKVVVNLSEYVLKEGDNNIPVQIESYPNNINIKNNGFLRVNVILDKYQEKSLPIVSKIKVNTEHGTYADKINISP
QNATVSGAQSLVSKVKTLEVKGEINDVSKAVNMNLPVVAVDEEGNEIKDVNISPNKVDVSFGVKKSKEVPVSVIITGTPK
EGLALKSITPSIAKVTLLGSEDALSKISSIETSPIDVSQYGDDSEVSTVLKIPDGVSLASNDQAQIKVKLDFSKDAQKEI
EVPVTTEGTLDGYTPELDTKTIKVTINGPEDSVNSIDLSKFKCTIDISKLTADGGSVKPNISNSYDNIKVVSINPTEIKV
TFKKNTDSTESTENNSTKPSDNSNNNNNTSNGSNNENSNNKQ

Sequences:

>Translated_442_residues
MLKKIEGKNFLVKFICLLLSFSLWLYIINVENPVRELKLNNVPVQVVNREVLKDYDLVMVPNQNLTVDLDLEGPSTEIYK
VKKEQFKVVVNLSEYVLKEGDNNIPVQIESYPNNINIKNNGFLRVNVILDKYQEKSLPIVSKIKVNTEHGTYADKINISP
QNATVSGAQSLVSKVKTLEVKGEINDVSKAVNMNLPVVAVDEEGNEIKDVNISPNKVDVSFGVKKSKEVPVSVIITGTPK
EGLALKSITPSIAKVTLLGSEDALSKISSIETSPIDVSQYGDDSEVSTVLKIPDGVSLASNDQAQIKVKLDFSKDAQKEI
EVPVTTEGTLDGYTPELDTKTIKVTINGPEDSVNSIDLSKFKCTIDISKLTADGGSVKPNISNSYDNIKVVSINPTEIKV
TFKKNTDSTESTENNSTKPSDNSNNNNNTSNGSNNENSNNKQ
>Mature_442_residues
MLKKIEGKNFLVKFICLLLSFSLWLYIINVENPVRELKLNNVPVQVVNREVLKDYDLVMVPNQNLTVDLDLEGPSTEIYK
VKKEQFKVVVNLSEYVLKEGDNNIPVQIESYPNNINIKNNGFLRVNVILDKYQEKSLPIVSKIKVNTEHGTYADKINISP
QNATVSGAQSLVSKVKTLEVKGEINDVSKAVNMNLPVVAVDEEGNEIKDVNISPNKVDVSFGVKKSKEVPVSVIITGTPK
EGLALKSITPSIAKVTLLGSEDALSKISSIETSPIDVSQYGDDSEVSTVLKIPDGVSLASNDQAQIKVKLDFSKDAQKEI
EVPVTTEGTLDGYTPELDTKTIKVTINGPEDSVNSIDLSKFKCTIDISKLTADGGSVKPNISNSYDNIKVVSINPTEIKV
TFKKNTDSTESTENNSTKPSDNSNNNNNTSNGSNNENSNNKQ

Specific function: Unknown

COG id: COG4856

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 YbbR-like domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012505 [H]

Pfam domain/function: PF07949 YbbR [H]

EC number: NA

Molecular weight: Translated: 48390; Mature: 48390

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKIEGKNFLVKFICLLLSFSLWLYIINVENPVRELKLNNVPVQVVNREVLKDYDLVMV
CCCEECCCCHHHHHHHHHHHHHEEEEEEECCCCHHHEEECCCCCEECCHHHHCCCCEEEE
PNQNLTVDLDLEGPSTEIYKVKKEQFKVVVNLSEYVLKEGDNNIPVQIESYPNNINIKNN
CCCCEEEEEECCCCCCCEEEEECCEEEEEEEEHHHHHHCCCCCCCEEEECCCCEEEECCC
GFLRVNVILDKYQEKSLPIVSKIKVNTEHGTYADKINISPQNATVSGAQSLVSKVKTLEV
CEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHEEEEE
KGEINDVSKAVNMNLPVVAVDEEGNEIKDVNISPNKVDVSFGVKKSKEVPVSVIITGTPK
ECCHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEECCCC
EGLALKSITPSIAKVTLLGSEDALSKISSIETSPIDVSQYGDDSEVSTVLKIPDGVSLAS
CCEEEECCCCCEEEEEEECCHHHHHHHHHCCCCCCCHHHCCCCCCCEEEEECCCCCEECC
NDQAQIKVKLDFSKDAQKEIEVPVTTEGTLDGYTPELDTKTIKVTINGPEDSVNSIDLSK
CCCEEEEEEEECCCCCCHHEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEE
FKCTIDISKLTADGGSVKPNISNSYDNIKVVSINPTEIKVTFKKNTDSTESTENNSTKPS
EEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCC
DNSNNNNNTSNGSNNENSNNKQ
CCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLKKIEGKNFLVKFICLLLSFSLWLYIINVENPVRELKLNNVPVQVVNREVLKDYDLVMV
CCCEECCCCHHHHHHHHHHHHHEEEEEEECCCCHHHEEECCCCCEECCHHHHCCCCEEEE
PNQNLTVDLDLEGPSTEIYKVKKEQFKVVVNLSEYVLKEGDNNIPVQIESYPNNINIKNN
CCCCEEEEEECCCCCCCEEEEECCEEEEEEEEHHHHHHCCCCCCCEEEECCCCEEEECCC
GFLRVNVILDKYQEKSLPIVSKIKVNTEHGTYADKINISPQNATVSGAQSLVSKVKTLEV
CEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHEEEEE
KGEINDVSKAVNMNLPVVAVDEEGNEIKDVNISPNKVDVSFGVKKSKEVPVSVIITGTPK
ECCHHHHHHHHCCCCCEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCEEEEEECCCC
EGLALKSITPSIAKVTLLGSEDALSKISSIETSPIDVSQYGDDSEVSTVLKIPDGVSLAS
CCEEEECCCCCEEEEEEECCHHHHHHHHHCCCCCCCHHHCCCCCCCEEEEECCCCCEECC
NDQAQIKVKLDFSKDAQKEIEVPVTTEGTLDGYTPELDTKTIKVTINGPEDSVNSIDLSK
CCCEEEEEEEECCCCCCHHEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEE
FKCTIDISKLTADGGSVKPNISNSYDNIKVVSINPTEIKVTFKKNTDSTESTENNSTKPS
EEEEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCC
DNSNNNNNTSNGSNNENSNNKQ
CCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]