| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311315
Identifier: 18311315
GI number: 18311315
Start: 2685968
End: 2686285
Strand: Reverse
Name: 18311315
Synonym: CPE2333
Alternate gene names: NA
Gene position: 2686285-2685968 (Counterclockwise)
Preceding gene: 18311316
Following gene: 18311314
Centisome position: 88.61
GC content: 35.53
Gene sequence:
>318_bases ATGCCAAATTTAAGCTGTGGTGTAGATAACTGTGCATATAATCAAAATGATATGTGTTCATTAAATTCAATAAAAGTAAA TGGTTCATTTGCTAATCATTCAGAAGCTACTTGTTGTGGAAGCTTTGTTGAGAAAGGTGGATTTACTAACGCTGCTGTTG ATATGGGCCCTGCAGAGCCAGCAACTAGCGTTGCATGTGAAGCTGAGAAATGCTGTTACAATAAAAATTGTAAATGTCAT GCTGAAAGCATAGATATTTCAGGTGATTATGCACAACACCAAGACAATACAGAGTGTTCAACTTTTAGACAAGAATAA
Upstream 100 bases:
>100_bases ACAACAATATCTTAAATAGATTAGATGAGAAATAATTAGAAGAATAATTATTTTAAAAAGAGGCATACTACTATCATTAA TACTTAAGGAGGAATATAGT
Downstream 100 bases:
>100_bases TAAAATATTGATTTTACTAATTTAGAAGGAAGACTATATGATTTAGTCTTCTTTTTAAATAAATTTATTTATTTTATTGG ACAAGCTTATAATTCTACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MPNLSCGVDNCAYNQNDMCSLNSIKVNGSFANHSEATCCGSFVEKGGFTNAAVDMGPAEPATSVACEAEKCCYNKNCKCH AESIDISGDYAQHQDNTECSTFRQE
Sequences:
>Translated_105_residues MPNLSCGVDNCAYNQNDMCSLNSIKVNGSFANHSEATCCGSFVEKGGFTNAAVDMGPAEPATSVACEAEKCCYNKNCKCH AESIDISGDYAQHQDNTECSTFRQE >Mature_104_residues PNLSCGVDNCAYNQNDMCSLNSIKVNGSFANHSEATCCGSFVEKGGFTNAAVDMGPAEPATSVACEAEKCCYNKNCKCHA ESIDISGDYAQHQDNTECSTFRQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11234; Mature: 11103
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
10.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 13.3 %Cys+Met (Translated Protein) 10.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 12.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNLSCGVDNCAYNQNDMCSLNSIKVNGSFANHSEATCCGSFVEKGGFTNAAVDMGPAEP CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCC ATSVACEAEKCCYNKNCKCHAESIDISGDYAQHQDNTECSTFRQE CCCCCCCCHHHHCCCCCEEEECEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PNLSCGVDNCAYNQNDMCSLNSIKVNGSFANHSEATCCGSFVEKGGFTNAAVDMGPAEP CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCEEECCCCCC ATSVACEAEKCCYNKNCKCHAESIDISGDYAQHQDNTECSTFRQE CCCCCCCCHHHHCCCCCEEEECEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA