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The map label for this gene is ompR [H]

Identifier: 18311314

GI number: 18311314

Start: 2685106

End: 2685798

Strand: Reverse

Name: ompR [H]

Synonym: CPE2332

Alternate gene names: 18311314

Gene position: 2685798-2685106 (Counterclockwise)

Preceding gene: 18311315

Following gene: 18311313

Centisome position: 88.6

GC content: 29.15

Gene sequence:

>693_bases
TTGAATATATTATTAGTTGATGATGAAGAAAAAATCATTGAGGTATTAGAAGCTTATTTGAAAAAAGAAGGTTTCAGTGT
TTTTTCTTGTAGTAATGGAGAAGAGGCTTTAAAGATATTTGATAACAATAAAATAGATTTGATTCTTTTAGATCTTATGC
TTCCAGATTTAAGTGGAGAAGAGGTTTGTAAGGTTATTAGGGCAAAGAGTTGTGTTCCAATAATAATGATAACAGCTAAG
ACTGAGGAAGAGGATTTATTAGAAGGCTTTGATATTGGAGCCGATGATTATGTTACAAAACCTTTTAGTGTTAAACAGCT
TATTGCTAGAATAAAAGCTATTATTAGAAGAAGCACACCATGTCCTAATGAGGGAAGTGATATTTTAGTATTTAATAATG
GAGAGTTAAAAATTAATGTAGATACAAGAGAAGTGTGGGTTAGAGATGAATTAATCACTCTAACATCAACAGAGTTTAAT
ATACTTCTTTGCTTAAGTAGCTATCCAAAGAAAATATTTACTAGAGACGAAATAATAGAGTTAGTATTAGGGGATAAAAG
TGATAGCTTTGATAGGGTTATAGATTCTCACATAAAAAATTTAAGAGGTAAAATAGAAGAAAATACTAGAAAACCTAAGT
TCATAGTAACTGTATATGGGGTGGGATATAAATTTGAAGGTAAGAAAATATAA

Upstream 100 bases:

>100_bases
TATTTTATTGGACAAGCTTATAATTCTACATATTATTTATATAGTTTTTAGTTTAAATATAACTAATGAAAATTCTAATT
ATTTATAAGAGGTGGAAAGT

Downstream 100 bases:

>100_bases
AAGTTTAAATTTTAAGGTTATAGTTCCATCTATAGTTATCATAATAATTGTAACTTTACTTACTGTGGTCATATCTAAAT
TTTATTTTGATAAAAAATTT

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MNILLVDDEEKIIEVLEAYLKKEGFSVFSCSNGEEALKIFDNNKIDLILLDLMLPDLSGEEVCKVIRAKSCVPIIMITAK
TEEEDLLEGFDIGADDYVTKPFSVKQLIARIKAIIRRSTPCPNEGSDILVFNNGELKINVDTREVWVRDELITLTSTEFN
ILLCLSSYPKKIFTRDEIIELVLGDKSDSFDRVIDSHIKNLRGKIEENTRKPKFIVTVYGVGYKFEGKKI

Sequences:

>Translated_230_residues
MNILLVDDEEKIIEVLEAYLKKEGFSVFSCSNGEEALKIFDNNKIDLILLDLMLPDLSGEEVCKVIRAKSCVPIIMITAK
TEEEDLLEGFDIGADDYVTKPFSVKQLIARIKAIIRRSTPCPNEGSDILVFNNGELKINVDTREVWVRDELITLTSTEFN
ILLCLSSYPKKIFTRDEIIELVLGDKSDSFDRVIDSHIKNLRGKIEENTRKPKFIVTVYGVGYKFEGKKI
>Mature_230_residues
MNILLVDDEEKIIEVLEAYLKKEGFSVFSCSNGEEALKIFDNNKIDLILLDLMLPDLSGEEVCKVIRAKSCVPIIMITAK
TEEEDLLEGFDIGADDYVTKPFSVKQLIARIKAIIRRSTPCPNEGSDILVFNNGELKINVDTREVWVRDELITLTSTEFN
ILLCLSSYPKKIFTRDEIIELVLGDKSDSFDRVIDSHIKNLRGKIEENTRKPKFIVTVYGVGYKFEGKKI

Specific function: The N-terminus of this protein is required for the transcriptional expression of both major outer membrane protein genes ompF and ompC; its C-terminal moiety mediates the multimerization of the ompR protein. As a multimer, it turns on the expression of th

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=228, Percent_Identity=40.3508771929825, Blast_Score=186, Evalue=9e-49,
Organism=Escherichia coli, GI1788394, Length=230, Percent_Identity=40, Blast_Score=169, Evalue=1e-43,
Organism=Escherichia coli, GI1790860, Length=231, Percent_Identity=35.0649350649351, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1786599, Length=230, Percent_Identity=34.7826086956522, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI2367329, Length=231, Percent_Identity=35.4978354978355, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1786784, Length=227, Percent_Identity=36.1233480176211, Blast_Score=134, Evalue=6e-33,
Organism=Escherichia coli, GI1786911, Length=224, Percent_Identity=32.1428571428571, Blast_Score=134, Evalue=7e-33,
Organism=Escherichia coli, GI1790863, Length=235, Percent_Identity=31.063829787234, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=31.140350877193, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI87082012, Length=230, Percent_Identity=31.304347826087, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1790552, Length=224, Percent_Identity=31.25, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1787375, Length=227, Percent_Identity=29.9559471365639, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789402, Length=225, Percent_Identity=28.8888888888889, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI145693140, Length=236, Percent_Identity=27.5423728813559, Blast_Score=95, Evalue=5e-21,
Organism=Escherichia coli, GI1788550, Length=106, Percent_Identity=34.9056603773585, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI48994928, Length=116, Percent_Identity=37.0689655172414, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1790299, Length=114, Percent_Identity=28.9473684210526, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788905, Length=124, Percent_Identity=27.4193548387097, Blast_Score=61, Evalue=6e-11,
Organism=Escherichia coli, GI1788191, Length=121, Percent_Identity=28.9256198347107, Blast_Score=61, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=103, Percent_Identity=30.0970873786408, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26142; Mature: 26142

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILLVDDEEKIIEVLEAYLKKEGFSVFSCSNGEEALKIFDNNKIDLILLDLMLPDLSGE
CEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCEEEEEEEECCCCCCHH
EVCKVIRAKSCVPIIMITAKTEEEDLLEGFDIGADDYVTKPFSVKQLIARIKAIIRRSTP
HHHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
CPNEGSDILVFNNGELKINVDTREVWVRDELITLTSTEFNILLCLSSYPKKIFTRDEIIE
CCCCCCEEEEEECCEEEEEECHHHEEEECEEEEEECCCEEEEEEECCCCHHHHCHHHHHE
LVLGDKSDSFDRVIDSHIKNLRGKIEENTRKPKFIVTVYGVGYKFEGKKI
EEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEECCCCC
>Mature Secondary Structure
MNILLVDDEEKIIEVLEAYLKKEGFSVFSCSNGEEALKIFDNNKIDLILLDLMLPDLSGE
CEEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECCCCEEEEEEEECCCCCCHH
EVCKVIRAKSCVPIIMITAKTEEEDLLEGFDIGADDYVTKPFSVKQLIARIKAIIRRSTP
HHHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
CPNEGSDILVFNNGELKINVDTREVWVRDELITLTSTEFNILLCLSSYPKKIFTRDEIIE
CCCCCCEEEEEECCEEEEEECHHHEEEECEEEEEECCCEEEEEEECCCCHHHHCHHHHHE
LVLGDKSDSFDRVIDSHIKNLRGKIEENTRKPKFIVTVYGVGYKFEGKKI
EEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]