| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is glmM
Identifier: 18311311
GI number: 18311311
Start: 2680350
End: 2681696
Strand: Reverse
Name: glmM
Synonym: CPE2329
Alternate gene names: 18311311
Gene position: 2681696-2680350 (Counterclockwise)
Preceding gene: 18311313
Following gene: 18311309
Centisome position: 88.46
GC content: 32.59
Gene sequence:
>1347_bases TTGTCAAGATTATTTGGAACAGATGGAGTTAGAGGAATAGCAAATACTGAATTAACAGCAGAATTAGCATATAACTTAGG TAGAGCTGGAGCTTATGTTTTAACAGAGGGAACTCATAAACCTAAGATATTAGTAGCAAAAGATACTAGAATATCAGGAG ATATGCTAGAGGCTGCTTTAGTTGCAGGTATATTATCAGTTGGAGCAGAAGCAGTATGCTTAGGAGTAGTTCCAACACCA GCGGTAGCTCACTTAACAAGAGTATATGGAGCAGACGCTGGAGTTATGATATCAGCTTCACACAATCCAGTTGAATATAA TGGAATAAAATTCTTTGATGATAAGGGATATAAATTATCAGATGATTTAGAAGATGAAATACAAAGAGTTATAGAAAGTG GTTTTGAAAATGTACCTTCACCAACAGGAGCTAATTTAGGAAGAGAAATAATAGAAAAAGCTGCTTTAGAAGATTATATA AGCTTTGCTAAAGATACAATAGGAATATCTTTAGAAGGATTAAGAGTAGCTTTAGATTGTGCAAATGGTGCATCTCACGA AGCTGCTGTTAGAGCCTTCAGAGAATTAGGAGCAGAAATATTTGTAATAAATGATAATCCAGATGGAACTAATATAAATG AAAATTGTGGATCAACTCATCCAGAAGAATTAATGGAGTATGTTGTTAAGAAAAAATGTCATATGGGATTTGCTTTTGAT GGAGATGCAGATAGATGCTTAGCTGTTGATGAGCAAGGAAACTTAGTTGATGGAGATTTCATCTTAACAATATGTGCTAA ATACTTAAAAGAATTAGGTAGATTAAAAGATGATACTCTAGTTGTAACTGTAATGAGTAACTTAGGACTAATGATAGCTT GTAAGAATGAAAAAATAAATACTGCAGTTACAAAAGTTGGAGATAGATATGTATTAGAAGAAATGTTAGCTAAAGGATAT TCTTTAGGTGGAGAACAATCAGGTCATATCATATTCTTAGATCATAACTCAACTGGAGATGGACTTGTTACTGCACTTCA AGTAGCTAGCATAGTTAAGAGAACTGGAAAATCTTTATTTGAATTAAAAAATGTAATGAAGGTATTACCACAAGTTTTAG TTAACGCAAAAGTACCTAATAACATGAAAAATATTCATGAAGAAGATGAAGAAATAATAGCTGAAATTAAGAAAATGGAA GCTGCTTTAGATGGTTGCGGAAGAGTATTAATAAGACCATCAGGTACAGAACCATTAGTAAGAGTTATGCTTGAAGGTGA AAATCAAGCTGAGATAGATGAAATGGCTCATAACTTAGCAAAAATGATAGAAGCAAAATGTAATTAA
Upstream 100 bases:
>100_bases TATTCTTTGAAAGTGTAAAAAGTATTAATTAAGTAGCAAAATTATAGGTATTTTAATTAAATATAAGTATAATATAAATT TATTAGAGGGGTGACATAAA
Downstream 100 bases:
>100_bases TATATTATATTAAACTATAAAAGTCTTATATAAAACCATAGAATTATAAAAGCTATAAATACATGATAATTTTATTTAAA ACTATTCATGTTATTTATAG
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MSRLFGTDGVRGIANTELTAELAYNLGRAGAYVLTEGTHKPKILVAKDTRISGDMLEAALVAGILSVGAEAVCLGVVPTP AVAHLTRVYGADAGVMISASHNPVEYNGIKFFDDKGYKLSDDLEDEIQRVIESGFENVPSPTGANLGREIIEKAALEDYI SFAKDTIGISLEGLRVALDCANGASHEAAVRAFRELGAEIFVINDNPDGTNINENCGSTHPEELMEYVVKKKCHMGFAFD GDADRCLAVDEQGNLVDGDFILTICAKYLKELGRLKDDTLVVTVMSNLGLMIACKNEKINTAVTKVGDRYVLEEMLAKGY SLGGEQSGHIIFLDHNSTGDGLVTALQVASIVKRTGKSLFELKNVMKVLPQVLVNAKVPNNMKNIHEEDEEIIAEIKKME AALDGCGRVLIRPSGTEPLVRVMLEGENQAEIDEMAHNLAKMIEAKCN
Sequences:
>Translated_448_residues MSRLFGTDGVRGIANTELTAELAYNLGRAGAYVLTEGTHKPKILVAKDTRISGDMLEAALVAGILSVGAEAVCLGVVPTP AVAHLTRVYGADAGVMISASHNPVEYNGIKFFDDKGYKLSDDLEDEIQRVIESGFENVPSPTGANLGREIIEKAALEDYI SFAKDTIGISLEGLRVALDCANGASHEAAVRAFRELGAEIFVINDNPDGTNINENCGSTHPEELMEYVVKKKCHMGFAFD GDADRCLAVDEQGNLVDGDFILTICAKYLKELGRLKDDTLVVTVMSNLGLMIACKNEKINTAVTKVGDRYVLEEMLAKGY SLGGEQSGHIIFLDHNSTGDGLVTALQVASIVKRTGKSLFELKNVMKVLPQVLVNAKVPNNMKNIHEEDEEIIAEIKKME AALDGCGRVLIRPSGTEPLVRVMLEGENQAEIDEMAHNLAKMIEAKCN >Mature_447_residues SRLFGTDGVRGIANTELTAELAYNLGRAGAYVLTEGTHKPKILVAKDTRISGDMLEAALVAGILSVGAEAVCLGVVPTPA VAHLTRVYGADAGVMISASHNPVEYNGIKFFDDKGYKLSDDLEDEIQRVIESGFENVPSPTGANLGREIIEKAALEDYIS FAKDTIGISLEGLRVALDCANGASHEAAVRAFRELGAEIFVINDNPDGTNINENCGSTHPEELMEYVVKKKCHMGFAFDG DADRCLAVDEQGNLVDGDFILTICAKYLKELGRLKDDTLVVTVMSNLGLMIACKNEKINTAVTKVGDRYVLEEMLAKGYS LGGEQSGHIIFLDHNSTGDGLVTALQVASIVKRTGKSLFELKNVMKVLPQVLVNAKVPNNMKNIHEEDEEIIAEIKKMEA ALDGCGRVLIRPSGTEPLVRVMLEGENQAEIDEMAHNLAKMIEAKCN
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=450, Percent_Identity=45.3333333333333, Blast_Score=333, Evalue=1e-92, Organism=Escherichia coli, GI1788361, Length=461, Percent_Identity=28.6334056399132, Blast_Score=138, Evalue=8e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_CLOP1 (Q0TMX1)
Other databases:
- EMBL: CP000246 - RefSeq: YP_697019.1 - ProteinModelPortal: Q0TMX1 - SMR: Q0TMX1 - STRING: Q0TMX1 - GeneID: 4202526 - GenomeReviews: CP000246_GR - KEGG: cpf:CPF_2638 - TIGR: CPF_2638 - eggNOG: COG1109 - HOGENOM: HBG644964 - OMA: EEAGINS - ProtClustDB: PRK14316 - BioCyc: CPER195103:CPF_2638-MONOMER - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509 - TIGRFAMs: TIGR01455
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 48356; Mature: 48225
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 100-100
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLFGTDGVRGIANTELTAELAYNLGRAGAYVLTEGTHKPKILVAKDTRISGDMLEAAL CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHH VAGILSVGAEAVCLGVVPTPAVAHLTRVYGADAGVMISASHNPVEYNGIKFFDDKGYKLS HHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCEEECCEEEECCCCCCCC DDLEDEIQRVIESGFENVPSPTGANLGREIIEKAALEDYISFAKDTIGISLEGLRVALDC CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECEEEEEEC ANGASHEAAVRAFRELGAEIFVINDNPDGTNINENCGSTHPEELMEYVVKKKCHMGFAFD CCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEC GDADRCLAVDEQGNLVDGDFILTICAKYLKELGRLKDDTLVVTVMSNLGLMIACKNEKIN CCCCCEEEECCCCCEECHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCEEEEECCCCHH TAVTKVGDRYVLEEMLAKGYSLGGEQSGHIIFLDHNSTGDGLVTALQVASIVKRTGKSLF HHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH ELKNVMKVLPQVLVNAKVPNNMKNIHEEDEEIIAEIKKMEAALDGCGRVLIRPSGTEPLV HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHH RVMLEGENQAEIDEMAHNLAKMIEAKCN HHEECCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRLFGTDGVRGIANTELTAELAYNLGRAGAYVLTEGTHKPKILVAKDTRISGDMLEAAL CCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHHHH VAGILSVGAEAVCLGVVPTPAVAHLTRVYGADAGVMISASHNPVEYNGIKFFDDKGYKLS HHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCEEECCEEEECCCCCCCC DDLEDEIQRVIESGFENVPSPTGANLGREIIEKAALEDYISFAKDTIGISLEGLRVALDC CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECEEEEEEC ANGASHEAAVRAFRELGAEIFVINDNPDGTNINENCGSTHPEELMEYVVKKKCHMGFAFD CCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEC GDADRCLAVDEQGNLVDGDFILTICAKYLKELGRLKDDTLVVTVMSNLGLMIACKNEKIN CCCCCEEEECCCCCEECHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCEEEEECCCCHH TAVTKVGDRYVLEEMLAKGYSLGGEQSGHIIFLDHNSTGDGLVTALQVASIVKRTGKSLF HHHHHHCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH ELKNVMKVLPQVLVNAKVPNNMKNIHEEDEEIIAEIKKMEAALDGCGRVLIRPSGTEPLV HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHH RVMLEGENQAEIDEMAHNLAKMIEAKCN HHEECCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA