| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311307
Identifier: 18311307
GI number: 18311307
Start: 2675835
End: 2676647
Strand: Reverse
Name: 18311307
Synonym: CPE2325
Alternate gene names: NA
Gene position: 2676647-2675835 (Counterclockwise)
Preceding gene: 18311308
Following gene: 18311306
Centisome position: 88.3
GC content: 31.24
Gene sequence:
>813_bases GTGGAAAAATTTCAAGAAAATAATATTTTAGAAGATAAAAAAGTATGTATAAATGAAAATGAAGAGGCGTGGAATAAAGA GACATATAATGCTTGGATAAAGAGATTTGGAACTGCTAAGGAAGCAGCAGAAAAAATTAAATCTATGCCTGAGAAAAAAT TAAATGTTTTATTAGATAAATTTGGAGATGTTAAAGGAAAGAAGATATTTAATCTTATGGGATCTAATGGAAATAAGGCT GTTGCATTAGCTTTATTAGGGGCAGATGTTACTGTAGTAGATTTCTCGGAAGGAAATAGAAGATATGCTTTAGATTTAGC TGAGGCCTGCGGAGTAAAGATTAACTTCATTCTAAGTGATGTTTTAAGAATGCCTAAAGAAGTTATGAGTGGAGATTATG ATATAGTATTTGCAGAAATGGGAATACTTCATTATTTCTCAGATTTATCTCCTTTCATGAATGTTATACATAGTTTATTA AAGGATGGAGGGAAGGCTGTATTAAGAGATTTTCATCCAGTATCAACTAAACTAATAACTTCAAGGGGTTCTACAGCAAA GGTAAGAAAGCATAAGGTTACAGGAGATTACTTTGATACTTCATTAGAAGAGAAAGAAGTTGCTTACTCAAAATACTTAG AAGAAGGAGAAGTAGAAAAAGTATTTTTACGTAAGTGGAATTTAGGAGAAATAGTAACTGCCGTTGCCAATACTGGACTT AAGATAGAAAGTTTAACAGAGGAGCCTAATTTATCAAGTGATGTCTTTGATAAAGGAATTCCAAAGACTTTTACAATAGT AGCTAGAAAATAA
Upstream 100 bases:
>100_bases AAAAATATATTGAAAAATGCTTTTTATTGAAGTATAATACTTTCGCTAAAACCTCATAATTCTGAGGAATAAGCTAATAT TAATTAATGAGGTATTTACA
Downstream 100 bases:
>100_bases TTTAATAGACTTGGTCGTGTATCAAAATAGATTTTTATAAAACTTACAAACAGTATGAAGAAGTAATTCTCGGAATATGT TTGTAAGTTTTATTATTATA
Product: hypothetical protein
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; S-Adenosylmethionine-Dependent Methyltransferase; Methyltransferase; Methyltransferase Family Protein; Methyltransferase Domain Protein; Sam Dependent Methyltransferase
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MEKFQENNILEDKKVCINENEEAWNKETYNAWIKRFGTAKEAAEKIKSMPEKKLNVLLDKFGDVKGKKIFNLMGSNGNKA VALALLGADVTVVDFSEGNRRYALDLAEACGVKINFILSDVLRMPKEVMSGDYDIVFAEMGILHYFSDLSPFMNVIHSLL KDGGKAVLRDFHPVSTKLITSRGSTAKVRKHKVTGDYFDTSLEEKEVAYSKYLEEGEVEKVFLRKWNLGEIVTAVANTGL KIESLTEEPNLSSDVFDKGIPKTFTIVARK
Sequences:
>Translated_270_residues MEKFQENNILEDKKVCINENEEAWNKETYNAWIKRFGTAKEAAEKIKSMPEKKLNVLLDKFGDVKGKKIFNLMGSNGNKA VALALLGADVTVVDFSEGNRRYALDLAEACGVKINFILSDVLRMPKEVMSGDYDIVFAEMGILHYFSDLSPFMNVIHSLL KDGGKAVLRDFHPVSTKLITSRGSTAKVRKHKVTGDYFDTSLEEKEVAYSKYLEEGEVEKVFLRKWNLGEIVTAVANTGL KIESLTEEPNLSSDVFDKGIPKTFTIVARK >Mature_270_residues MEKFQENNILEDKKVCINENEEAWNKETYNAWIKRFGTAKEAAEKIKSMPEKKLNVLLDKFGDVKGKKIFNLMGSNGNKA VALALLGADVTVVDFSEGNRRYALDLAEACGVKINFILSDVLRMPKEVMSGDYDIVFAEMGILHYFSDLSPFMNVIHSLL KDGGKAVLRDFHPVSTKLITSRGSTAKVRKHKVTGDYFDTSLEEKEVAYSKYLEEGEVEKVFLRKWNLGEIVTAVANTGL KIESLTEEPNLSSDVFDKGIPKTFTIVARK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30329; Mature: 30329
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKFQENNILEDKKVCINENEEAWNKETYNAWIKRFGTAKEAAEKIKSMPEKKLNVLLDK CCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHH FGDVKGKKIFNLMGSNGNKAVALALLGADVTVVDFSEGNRRYALDLAEACGVKINFILSD HCCCCCHHHHEEECCCCCCEEEEEEECCCEEEEECCCCCCEEEEEHHHHCCCCHHHHHHH VLRMPKEVMSGDYDIVFAEMGILHYFSDLSPFMNVIHSLLKDGGKAVLRDFHPVSTKLIT HHHCCHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHH SRGSTAKVRKHKVTGDYFDTSLEEKEVAYSKYLEEGEVEKVFLRKWNLGEIVTAVANTGL CCCCCHHHHHHCCCCCHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCC KIESLTEEPNLSSDVFDKGIPKTFTIVARK EEEECCCCCCCCHHHHHCCCCCEEEEEECC >Mature Secondary Structure MEKFQENNILEDKKVCINENEEAWNKETYNAWIKRFGTAKEAAEKIKSMPEKKLNVLLDK CCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHH FGDVKGKKIFNLMGSNGNKAVALALLGADVTVVDFSEGNRRYALDLAEACGVKINFILSD HCCCCCHHHHEEECCCCCCEEEEEEECCCEEEEECCCCCCEEEEEHHHHCCCCHHHHHHH VLRMPKEVMSGDYDIVFAEMGILHYFSDLSPFMNVIHSLLKDGGKAVLRDFHPVSTKLIT HHHCCHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHH SRGSTAKVRKHKVTGDYFDTSLEEKEVAYSKYLEEGEVEKVFLRKWNLGEIVTAVANTGL CCCCCHHHHHHCCCCCHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCCC KIESLTEEPNLSSDVFDKGIPKTFTIVARK EEEECCCCCCCCHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA