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The map label for this gene is pepF [H]

Identifier: 18311305

GI number: 18311305

Start: 2673241

End: 2674935

Strand: Reverse

Name: pepF [H]

Synonym: CPE2323

Alternate gene names: 18311305

Gene position: 2674935-2673241 (Counterclockwise)

Preceding gene: 18311306

Following gene: 18311303

Centisome position: 88.24

GC content: 29.85

Gene sequence:

>1695_bases
ATGAAATTTGAAGATTTTAAATATGAAAGACCTAATATAGAAAAAGATAGAGAAGATATTAGATCTTTTATAAAAGAGTT
AGAAGAAGCAAAGGACTTTAATGGGGCTAAAGAAGTAATAGGAAAAATAAATAAGATAAGAAATAATACATCAACTATGA
TGGCATTATCAGAAGTTAGACACACAATAAATACTGAGGATGAATTCTATAATGAAGAAAGTGATTTCTGGGATGAAAAT
TCTCCTCTTATTGAAGAAGTTAATAATGAATTTTATAAAGCATTATTAAGTTCACCTTTTAAGGATCAAATAGGTGATTA
TTATGGTGAAACTATAATAAAAGAGGCAGAGTATTCTCAAAAAAGTTTTTCAAAAGAAGTAATAGAAGATATGCAACTTG
AAAATAAATTAGGTAGTCAATATCAAAAACTTATTGCTTCAGCTAAAATTGAATTTGATGGAGAGGAAAGAACCTTAGCA
CAATTAGTTCCTTTTGTAACATCAGAGGATAGAGAAGTTAGAAAAAGAGCATCAGAAGCTAAATATAACTTCTTTGTGAA
GAATGAAGATGAAATAGATGATATCTTTGATAAACTTGTAAAGGTAAGAACAAAAATAGCTAAAAAGCTTGGTTTTAATA
ACTTTGTGGAATTAGGCTATGTAAGAATGAGAAGATATGACTATAATAAGGAAATGGTTGAAAACTTCAGAAAACAAGTT
GAAGAGTTTATAGTTCCTATAGATAGTAAATTATATGAAAGACAAGCTAAGAGATTAGGACTTGAAACTTTAAAATATTA
TGATGAAAAATTTGAGTTCTTAAGTGGAAATCCAACTCCAAAGGGAGATTCAAAGTGGATAGTTGAAAATGCAAAGGTAA
TGTATTCAGAGCTTTCAAAGGAGACTAAAGAATTCTTTGATTTTATGGTTGAGAATGATTTAATGGACTTAGTTGCTAAG
AAAGGAAAGGCAGCTGGAGGATATTGTACTAATTTCCCTAACTATAAAGCTCCATTTATATTCTCAAACTTTAATGGAAC
AGCTGGGGATGTAGATGTATTAACTCATGAGGCTGGCCATGCATTCCAAAACTTTAGAAGTTCTTGGATAGAAATGCAAG
AGTGTCAATGGCCAACTATGGAAAGTTGTGAAATACATTCAATGAGTATGGAATTCTTTACTTGGCCTTGGATGTATTTA
TTCTTTAAAGAGGATACAGATAAATATAAATTCTATCATTTAGGAGATGCAATTAAATTTATTCCTTATGGAGTAACAGT
TGATGAATTCCAACACTTTGTATATGAAAATCCAGAATGTACACCAAAGGAAAGAAAAGATGCATGGAGAAGAATAGAGA
AAAAATATCTTCCACATAAAAACTATGATGAATGTGATTTCCTAGAAAGAGGTGGTTGGTGGTTCCAACAAAACCATATA
TTCTTATCACCATTCTATTACATTGATTATACTTTAGCTCAAATATGTGCACTTCAATTCTGGAAAAAAGATAGAGAAAA
TCATGAGAAAGCATGGGAAGATTATTTAAATCTATGTAAAATAGGTGGAACTAAAACATTCTTAGGTTTATTAAAATATG
CTAACTTAAAATCACCATTTGAAAATGGATGTGTTGAAAGTGTAGTAGGAGTAGTGGATGAATACTTAGAAAGCATAGAC
GACAGCAAGTTTTAG

Upstream 100 bases:

>100_bases
CATAATAGTAAAATAATATTTTTGATAATTTTACTTTATTGATAATAAATTTTACTTATGTCAGAATTATATAAAATATA
ATTGTGAGGTGGGGTAAACA

Downstream 100 bases:

>100_bases
TTTTTAAAACAAAATTTATTATTTATTTAGAGTATGATTAAGTAAGTTTATTATGAATATAGATTAAACTTATCAAAATT
AATAATAACTATAAAATACT

Product: oligoendopeptidase, M3 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MKFEDFKYERPNIEKDREDIRSFIKELEEAKDFNGAKEVIGKINKIRNNTSTMMALSEVRHTINTEDEFYNEESDFWDEN
SPLIEEVNNEFYKALLSSPFKDQIGDYYGETIIKEAEYSQKSFSKEVIEDMQLENKLGSQYQKLIASAKIEFDGEERTLA
QLVPFVTSEDREVRKRASEAKYNFFVKNEDEIDDIFDKLVKVRTKIAKKLGFNNFVELGYVRMRRYDYNKEMVENFRKQV
EEFIVPIDSKLYERQAKRLGLETLKYYDEKFEFLSGNPTPKGDSKWIVENAKVMYSELSKETKEFFDFMVENDLMDLVAK
KGKAAGGYCTNFPNYKAPFIFSNFNGTAGDVDVLTHEAGHAFQNFRSSWIEMQECQWPTMESCEIHSMSMEFFTWPWMYL
FFKEDTDKYKFYHLGDAIKFIPYGVTVDEFQHFVYENPECTPKERKDAWRRIEKKYLPHKNYDECDFLERGGWWFQQNHI
FLSPFYYIDYTLAQICALQFWKKDRENHEKAWEDYLNLCKIGGTKTFLGLLKYANLKSPFENGCVESVVGVVDEYLESID
DSKF

Sequences:

>Translated_564_residues
MKFEDFKYERPNIEKDREDIRSFIKELEEAKDFNGAKEVIGKINKIRNNTSTMMALSEVRHTINTEDEFYNEESDFWDEN
SPLIEEVNNEFYKALLSSPFKDQIGDYYGETIIKEAEYSQKSFSKEVIEDMQLENKLGSQYQKLIASAKIEFDGEERTLA
QLVPFVTSEDREVRKRASEAKYNFFVKNEDEIDDIFDKLVKVRTKIAKKLGFNNFVELGYVRMRRYDYNKEMVENFRKQV
EEFIVPIDSKLYERQAKRLGLETLKYYDEKFEFLSGNPTPKGDSKWIVENAKVMYSELSKETKEFFDFMVENDLMDLVAK
KGKAAGGYCTNFPNYKAPFIFSNFNGTAGDVDVLTHEAGHAFQNFRSSWIEMQECQWPTMESCEIHSMSMEFFTWPWMYL
FFKEDTDKYKFYHLGDAIKFIPYGVTVDEFQHFVYENPECTPKERKDAWRRIEKKYLPHKNYDECDFLERGGWWFQQNHI
FLSPFYYIDYTLAQICALQFWKKDRENHEKAWEDYLNLCKIGGTKTFLGLLKYANLKSPFENGCVESVVGVVDEYLESID
DSKF
>Mature_564_residues
MKFEDFKYERPNIEKDREDIRSFIKELEEAKDFNGAKEVIGKINKIRNNTSTMMALSEVRHTINTEDEFYNEESDFWDEN
SPLIEEVNNEFYKALLSSPFKDQIGDYYGETIIKEAEYSQKSFSKEVIEDMQLENKLGSQYQKLIASAKIEFDGEERTLA
QLVPFVTSEDREVRKRASEAKYNFFVKNEDEIDDIFDKLVKVRTKIAKKLGFNNFVELGYVRMRRYDYNKEMVENFRKQV
EEFIVPIDSKLYERQAKRLGLETLKYYDEKFEFLSGNPTPKGDSKWIVENAKVMYSELSKETKEFFDFMVENDLMDLVAK
KGKAAGGYCTNFPNYKAPFIFSNFNGTAGDVDVLTHEAGHAFQNFRSSWIEMQECQWPTMESCEIHSMSMEFFTWPWMYL
FFKEDTDKYKFYHLGDAIKFIPYGVTVDEFQHFVYENPECTPKERKDAWRRIEKKYLPHKNYDECDFLERGGWWFQQNHI
FLSPFYYIDYTLAQICALQFWKKDRENHEKAWEDYLNLCKIGGTKTFLGLLKYANLKSPFENGCVESVVGVVDEYLESID
DSKF

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 66967; Mature: 66967

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFEDFKYERPNIEKDREDIRSFIKELEEAKDFNGAKEVIGKINKIRNNTSTMMALSEVR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
HTINTEDEFYNEESDFWDENSPLIEEVNNEFYKALLSSPFKDQIGDYYGETIIKEAEYSQ
HHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KSFSKEVIEDMQLENKLGSQYQKLIASAKIEFDGEERTLAQLVPFVTSEDREVRKRASEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHCCCCHHHHHHHHHC
KYNFFVKNEDEIDDIFDKLVKVRTKIAKKLGFNNFVELGYVRMRRYDYNKEMVENFRKQV
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
EEFIVPIDSKLYERQAKRLGLETLKYYDEKFEFLSGNPTPKGDSKWIVENAKVMYSELSK
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
ETKEFFDFMVENDLMDLVAKKGKAAGGYCTNFPNYKAPFIFSNFNGTAGDVDVLTHEAGH
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHH
AFQNFRSSWIEMQECQWPTMESCEIHSMSMEFFTWPWMYLFFKEDTDKYKFYHLGDAIKF
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCHHHH
IPYGVTVDEFQHFVYENPECTPKERKDAWRRIEKKYLPHKNYDECDFLERGGWWFQQNHI
HCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEECCCE
FLSPFYYIDYTLAQICALQFWKKDRENHEKAWEDYLNLCKIGGTKTFLGLLKYANLKSPF
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCH
ENGCVESVVGVVDEYLESIDDSKF
HHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKFEDFKYERPNIEKDREDIRSFIKELEEAKDFNGAKEVIGKINKIRNNTSTMMALSEVR
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHH
HTINTEDEFYNEESDFWDENSPLIEEVNNEFYKALLSSPFKDQIGDYYGETIIKEAEYSQ
HHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KSFSKEVIEDMQLENKLGSQYQKLIASAKIEFDGEERTLAQLVPFVTSEDREVRKRASEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHCCCCHHHHHHHHHC
KYNFFVKNEDEIDDIFDKLVKVRTKIAKKLGFNNFVELGYVRMRRYDYNKEMVENFRKQV
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
EEFIVPIDSKLYERQAKRLGLETLKYYDEKFEFLSGNPTPKGDSKWIVENAKVMYSELSK
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
ETKEFFDFMVENDLMDLVAKKGKAAGGYCTNFPNYKAPFIFSNFNGTAGDVDVLTHEAGH
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHH
AFQNFRSSWIEMQECQWPTMESCEIHSMSMEFFTWPWMYLFFKEDTDKYKFYHLGDAIKF
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCHHHH
IPYGVTVDEFQHFVYENPECTPKERKDAWRRIEKKYLPHKNYDECDFLERGGWWFQQNHI
HCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEECCCE
FLSPFYYIDYTLAQICALQFWKKDRENHEKAWEDYLNLCKIGGTKTFLGLLKYANLKSPF
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCH
ENGCVESVVGVVDEYLESIDDSKF
HHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]