| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311303
Identifier: 18311303
GI number: 18311303
Start: 2668165
End: 2669574
Strand: Reverse
Name: 18311303
Synonym: CPE2321
Alternate gene names: NA
Gene position: 2669574-2668165 (Counterclockwise)
Preceding gene: 18311305
Following gene: 18311301
Centisome position: 88.06
GC content: 25.67
Gene sequence:
>1410_bases ATGATTGAAGGAGATAAGAGGCTAAATATTGTTTTTACTGGAGATAGCATAACTCATGGGCCACTTCATACTAAAGGATA TAGAAGTTATACAGAACATTTTAGAGAAAGATTAAAAGAAAAGTTTAAAAACAATATTGTTAAAGAGCATATTATGGTTT TTAATACAGGGGTGTCAGGAGCTACAACTAGAGATATAATAAGAGATTTTAATATCTGTGTAAATATATATGACCCTGAT ATTGTTTTTATAATGCTTGGAATGAATGATTCATCAAATGAAATTGTTCCTTTAGAAGAATATAGAAAAAATATATTAGA ACTTATTAATAAAGTTAGAGAAATTGGAGCAATACCAATCCTTCAAACAAGTAACATAATAAAAATGGATTTAAGTAGGA AAAGTCTTAAATTTTATATGGATATTCTTAGAGAGGTTGCTAGAGGAAATGATGTAATGTTAATAGATCATTATAGTCAT TGGGAGGACTTAGAAAAAGAAAATTCTAATATTAAAAATGAGCTTCTTAGTGATTTGATACATCCTAATGAAAAGGGGCA TTTAGAAATAGTTAAATTTATTTTTAAGGAGTTAGATATTTTTGAAGAAGACAGTTATACCTGTAATTTAAGTTATCCAA TAAAAGCAGAAAATTATTTTGAAGGAAAAGTTCATAGTAAATATAATCAAGAAATTTTTAATACTATAAGTAATAAAACT TCATTACAAGAAGAATTGATTAAATCTAATAAAGAAAATTTAAATGATAATTTAGAAGCTATAACAAATTTAATAAATGA AGATGAAAAGGGTATATGGGTGTTTTTAGGTGATGAAGATACAAATGGTACAGGAGATACCTTTGGTTATAAAAATTATG TTGAATATGTGGAAGAGAGAATTAGATGGGAATTAAATCATGGATGTATAAATAAAAGGGAAAAATTTATGATTAATTTT GGTACAGAAAAAGTTAATTCAGAATATTTAATGAATAACTTCGAAGATTTAGTATCAAAATATAATCCTAAAGCTGTTTT TATTATGATTGGAGGAAATGAAAAAATTAATCCAGAGGAATTTAAACATAATTTAGTTAATATAGTAAGCAAGGTTAAAA GTATAAACTCCATACCTATCTTACAAAGTCCAATAAAAAATGGAAGAGATATAGAAGGGTATGTAAAAGTTATAAGAGAG GTTTCTAAGGAAGAAGAAATATTCTTAATAGATCATTATGAGTATTGGGATAGGTTAAGCAAAGTTCAAAAAGAGCTTAT AGAATCATGGTTAGTAGAAGGAAGAGCAAATCACAGGGGACATTTAGAAATAGCTAAGAAAATTTTTAAGGATTTAAGAA TATATGATCATAATAGTTTAATATGTGGTTTTACCATAGAAAAATTTTAG
Upstream 100 bases:
>100_bases TAAGTATTTTATAAAAATTTGGTTTTTAATAAATATTAATTTTTTAGGTAAAAAAGTATATAAACTGAAGTTAGAAGGAA ATAAGAAAGAGGGTATTATA
Downstream 100 bases:
>100_bases TATATTAATTGATAAAAATAAAGCTGCATCAAAACTGAAGTAGCTTTGATACAGCTTTCTATATACAACTTATTGCTTTT TGCAATATGAAATCTTCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MIEGDKRLNIVFTGDSITHGPLHTKGYRSYTEHFRERLKEKFKNNIVKEHIMVFNTGVSGATTRDIIRDFNICVNIYDPD IVFIMLGMNDSSNEIVPLEEYRKNILELINKVREIGAIPILQTSNIIKMDLSRKSLKFYMDILREVARGNDVMLIDHYSH WEDLEKENSNIKNELLSDLIHPNEKGHLEIVKFIFKELDIFEEDSYTCNLSYPIKAENYFEGKVHSKYNQEIFNTISNKT SLQEELIKSNKENLNDNLEAITNLINEDEKGIWVFLGDEDTNGTGDTFGYKNYVEYVEERIRWELNHGCINKREKFMINF GTEKVNSEYLMNNFEDLVSKYNPKAVFIMIGGNEKINPEEFKHNLVNIVSKVKSINSIPILQSPIKNGRDIEGYVKVIRE VSKEEEIFLIDHYEYWDRLSKVQKELIESWLVEGRANHRGHLEIAKKIFKDLRIYDHNSLICGFTIEKF
Sequences:
>Translated_469_residues MIEGDKRLNIVFTGDSITHGPLHTKGYRSYTEHFRERLKEKFKNNIVKEHIMVFNTGVSGATTRDIIRDFNICVNIYDPD IVFIMLGMNDSSNEIVPLEEYRKNILELINKVREIGAIPILQTSNIIKMDLSRKSLKFYMDILREVARGNDVMLIDHYSH WEDLEKENSNIKNELLSDLIHPNEKGHLEIVKFIFKELDIFEEDSYTCNLSYPIKAENYFEGKVHSKYNQEIFNTISNKT SLQEELIKSNKENLNDNLEAITNLINEDEKGIWVFLGDEDTNGTGDTFGYKNYVEYVEERIRWELNHGCINKREKFMINF GTEKVNSEYLMNNFEDLVSKYNPKAVFIMIGGNEKINPEEFKHNLVNIVSKVKSINSIPILQSPIKNGRDIEGYVKVIRE VSKEEEIFLIDHYEYWDRLSKVQKELIESWLVEGRANHRGHLEIAKKIFKDLRIYDHNSLICGFTIEKF >Mature_469_residues MIEGDKRLNIVFTGDSITHGPLHTKGYRSYTEHFRERLKEKFKNNIVKEHIMVFNTGVSGATTRDIIRDFNICVNIYDPD IVFIMLGMNDSSNEIVPLEEYRKNILELINKVREIGAIPILQTSNIIKMDLSRKSLKFYMDILREVARGNDVMLIDHYSH WEDLEKENSNIKNELLSDLIHPNEKGHLEIVKFIFKELDIFEEDSYTCNLSYPIKAENYFEGKVHSKYNQEIFNTISNKT SLQEELIKSNKENLNDNLEAITNLINEDEKGIWVFLGDEDTNGTGDTFGYKNYVEYVEERIRWELNHGCINKREKFMINF GTEKVNSEYLMNNFEDLVSKYNPKAVFIMIGGNEKINPEEFKHNLVNIVSKVKSINSIPILQSPIKNGRDIEGYVKVIRE VSKEEEIFLIDHYEYWDRLSKVQKELIESWLVEGRANHRGHLEIAKKIFKDLRIYDHNSLICGFTIEKF
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55002; Mature: 55002
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEGDKRLNIVFTGDSITHGPLHTKGYRSYTEHFRERLKEKFKNNIVKEHIMVFNTGVSG CCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC ATTRDIIRDFNICVNIYDPDIVFIMLGMNDSSNEIVPLEEYRKNILELINKVREIGAIPI CHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCE LQTSNIIKMDLSRKSLKFYMDILREVARGNDVMLIDHYSHWEDLEKENSNIKNELLSDLI EECCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHH HPNEKGHLEIVKFIFKELDIFEEDSYTCNLSYPIKAENYFEGKVHSKYNQEIFNTISNKT CCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCHH SLQEELIKSNKENLNDNLEAITNLINEDEKGIWVFLGDEDTNGTGDTFGYKNYVEYVEER HHHHHHHHCCHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH IRWELNHGCINKREKFMINFGTEKVNSEYLMNNFEDLVSKYNPKAVFIMIGGNEKINPEE HHEECCCCCCCCCCEEEEEECCHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHH FKHNLVNIVSKVKSINSIPILQSPIKNGRDIEGYVKVIREVSKEEEIFLIDHYEYWDRLS HHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHH KVQKELIESWLVEGRANHRGHLEIAKKIFKDLRIYDHNSLICGFTIEKF HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCEEECCCCEEEEEEECCC >Mature Secondary Structure MIEGDKRLNIVFTGDSITHGPLHTKGYRSYTEHFRERLKEKFKNNIVKEHIMVFNTGVSG CCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC ATTRDIIRDFNICVNIYDPDIVFIMLGMNDSSNEIVPLEEYRKNILELINKVREIGAIPI CHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCEECHHHHHHHHHHHHHHHHHHCCCCE LQTSNIIKMDLSRKSLKFYMDILREVARGNDVMLIDHYSHWEDLEKENSNIKNELLSDLI EECCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHH HPNEKGHLEIVKFIFKELDIFEEDSYTCNLSYPIKAENYFEGKVHSKYNQEIFNTISNKT CCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCHH SLQEELIKSNKENLNDNLEAITNLINEDEKGIWVFLGDEDTNGTGDTFGYKNYVEYVEER HHHHHHHHCCHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH IRWELNHGCINKREKFMINFGTEKVNSEYLMNNFEDLVSKYNPKAVFIMIGGNEKINPEE HHEECCCCCCCCCCEEEEEECCHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHH FKHNLVNIVSKVKSINSIPILQSPIKNGRDIEGYVKVIREVSKEEEIFLIDHYEYWDRLS HHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHH KVQKELIESWLVEGRANHRGHLEIAKKIFKDLRIYDHNSLICGFTIEKF HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCEEECCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA