Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311301

Identifier: 18311301

GI number: 18311301

Start: 2666820

End: 2667512

Strand: Reverse

Name: 18311301

Synonym: CPE2319

Alternate gene names: NA

Gene position: 2667512-2666820 (Counterclockwise)

Preceding gene: 18311303

Following gene: 18311300

Centisome position: 88.0

GC content: 27.13

Gene sequence:

>693_bases
ATGCATAACTTATTTCATAGAAGATCAAAGATAGAAGAAAATCCCGAGAAATTTTGGAGGGAATTAATAACAAAAAATGA
AACCCTAAAAGGAAGAATGTTTAAGGATGAACCTATAACTGAAGATACGAAATACCTACATTATGTAATATTCAATAGAA
AAGTTGGATTTCAAAATGTTTGGGTTATGGTACCTAACTTTAACAGATTAATAGAATTTATAGAGTATGTATTTATGCCA
GAAGCATACTATAAATGGGTTGAAGGGAAAAAGAAATTAATAACTCATATACCTTCAATTGATGTAGAAAAAATAATTTC
TATGATAAATCGAAAATCAACAGAAGAAGAAAAAGAAAAAATGAAAAATGACATTGTAGCATTAAGAAAATTAAAAGGGT
TAAGTGCTGATAATGGAATGAGGAAAATAAAAATATTCTGTAGTAGATTTAATAATAACTGGCTTGGAAATGATGATGAG
TTTTTATACTTAAAAGCTTTTGGCAGTGCTGAAGAGCTAGGAAAGTTTGTAGTAGAAACTAATCTTCAAACAGATAGTGA
GGATTCATATGAAAAAACTATAGGAATGACTACAGAAGAATGGTTTAAAGTTTGTGAAAATGCTCATAAGAATAAAGAAG
ATGAGGAAAAATTTAAAAAAGTTTTATTTAAACACTTAGAAGATATTGTATAA

Upstream 100 bases:

>100_bases
AAGATTAAGGTATACAAAGGAATTTAGTATTTTTTACACTTTGCTGTTAAAAAAAGTTAGCAATATAATTAAAATATAAA
GGATATGAGGGGGTTTTGAG

Downstream 100 bases:

>100_bases
AATTAAATTTTCTTTATATTTTAAAACTGAAATCGCTTAGTATTAATAAAAATATAAAATAAATTGAAAAAAATGTTGAC
ATTTTTTTAATAACTATGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MHNLFHRRSKIEENPEKFWRELITKNETLKGRMFKDEPITEDTKYLHYVIFNRKVGFQNVWVMVPNFNRLIEFIEYVFMP
EAYYKWVEGKKKLITHIPSIDVEKIISMINRKSTEEEKEKMKNDIVALRKLKGLSADNGMRKIKIFCSRFNNNWLGNDDE
FLYLKAFGSAEELGKFVVETNLQTDSEDSYEKTIGMTTEEWFKVCENAHKNKEDEEKFKKVLFKHLEDIV

Sequences:

>Translated_230_residues
MHNLFHRRSKIEENPEKFWRELITKNETLKGRMFKDEPITEDTKYLHYVIFNRKVGFQNVWVMVPNFNRLIEFIEYVFMP
EAYYKWVEGKKKLITHIPSIDVEKIISMINRKSTEEEKEKMKNDIVALRKLKGLSADNGMRKIKIFCSRFNNNWLGNDDE
FLYLKAFGSAEELGKFVVETNLQTDSEDSYEKTIGMTTEEWFKVCENAHKNKEDEEKFKKVLFKHLEDIV
>Mature_230_residues
MHNLFHRRSKIEENPEKFWRELITKNETLKGRMFKDEPITEDTKYLHYVIFNRKVGFQNVWVMVPNFNRLIEFIEYVFMP
EAYYKWVEGKKKLITHIPSIDVEKIISMINRKSTEEEKEKMKNDIVALRKLKGLSADNGMRKIKIFCSRFNNNWLGNDDE
FLYLKAFGSAEELGKFVVETNLQTDSEDSYEKTIGMTTEEWFKVCENAHKNKEDEEKFKKVLFKHLEDIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27582; Mature: 27582

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNLFHRRSKIEENPEKFWRELITKNETLKGRMFKDEPITEDTKYLHYVIFNRKVGFQNV
CCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHEEEECCCCCCEE
WVMVPNFNRLIEFIEYVFMPEAYYKWVEGKKKLITHIPSIDVEKIISMINRKSTEEEKEK
EEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHH
MKNDIVALRKLKGLSADNGMRKIKIFCSRFNNNWLGNDDEFLYLKAFGSAEELGKFVVET
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHC
NLQTDSEDSYEKTIGMTTEEWFKVCENAHKNKEDEEKFKKVLFKHLEDIV
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHNLFHRRSKIEENPEKFWRELITKNETLKGRMFKDEPITEDTKYLHYVIFNRKVGFQNV
CCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHEEEECCCCCCEE
WVMVPNFNRLIEFIEYVFMPEAYYKWVEGKKKLITHIPSIDVEKIISMINRKSTEEEKEK
EEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHH
MKNDIVALRKLKGLSADNGMRKIKIFCSRFNNNWLGNDDEFLYLKAFGSAEELGKFVVET
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHC
NLQTDSEDSYEKTIGMTTEEWFKVCENAHKNKEDEEKFKKVLFKHLEDIV
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA